Experiment: Methanol and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF2148 and GFF2149 are separated by 265 nucleotides GFF2149 and GFF2150 are separated by 9 nucleotides
GFF2148 - Putative aliphatic sulfonates transport permease protein SsuC, at 836,983 to 837,828
GFF2148
GFF2149 - hypothetical protein, at 838,094 to 838,837
GFF2149
GFF2150 - Potassium-transporting ATPase ATP-binding subunit, at 838,847 to 841,150
GFF2150
Position (kb) 838
839 Strain fitness (log2 ratio) -2
-1
0
1 at 837.094 kb on - strand, within GFF2148 at 837.094 kb on - strand, within GFF2148 at 837.329 kb on + strand, within GFF2148 at 837.329 kb on + strand, within GFF2148 at 837.329 kb on + strand, within GFF2148 at 837.330 kb on - strand, within GFF2148 at 837.330 kb on - strand, within GFF2148 at 837.330 kb on - strand, within GFF2148 at 837.377 kb on + strand, within GFF2148 at 837.377 kb on + strand, within GFF2148 at 837.378 kb on - strand, within GFF2148 at 837.956 kb on + strand at 837.956 kb on + strand at 837.956 kb on + strand at 837.956 kb on + strand at 837.956 kb on + strand at 837.956 kb on + strand at 837.956 kb on + strand at 837.957 kb on - strand at 837.957 kb on - strand at 837.957 kb on - strand at 837.957 kb on - strand at 837.957 kb on - strand at 837.957 kb on - strand at 837.957 kb on - strand at 837.957 kb on - strand at 837.957 kb on - strand at 837.957 kb on - strand at 837.957 kb on - strand at 838.148 kb on + strand at 838.148 kb on + strand at 838.149 kb on - strand at 838.149 kb on - strand at 838.149 kb on - strand at 838.149 kb on - strand at 838.157 kb on + strand at 838.157 kb on + strand at 838.157 kb on + strand at 838.192 kb on + strand, within GFF2149 at 838.394 kb on + strand, within GFF2149 at 838.395 kb on - strand, within GFF2149 at 838.395 kb on - strand, within GFF2149 at 838.395 kb on - strand, within GFF2149 at 838.395 kb on - strand, within GFF2149 at 838.395 kb on - strand, within GFF2149 at 838.395 kb on - strand, within GFF2149 at 838.556 kb on + strand, within GFF2149 at 838.556 kb on + strand, within GFF2149 at 838.556 kb on + strand, within GFF2149 at 838.662 kb on + strand, within GFF2149 at 838.662 kb on + strand, within GFF2149 at 838.663 kb on - strand, within GFF2149 at 838.663 kb on - strand, within GFF2149 at 838.663 kb on - strand, within GFF2149 at 838.667 kb on + strand, within GFF2149 at 838.709 kb on + strand, within GFF2149 at 838.709 kb on + strand, within GFF2149 at 838.709 kb on + strand, within GFF2149 at 838.710 kb on - strand, within GFF2149 at 838.710 kb on - strand, within GFF2149 at 838.751 kb on + strand, within GFF2149 at 838.751 kb on + strand, within GFF2149 at 838.752 kb on - strand, within GFF2149 at 838.976 kb on + strand at 838.977 kb on - strand at 839.030 kb on + strand at 839.031 kb on - strand at 839.700 kb on - strand, within GFF2150
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol and casaminos (C) remove 837,094 - GFF2148 0.13 -1.4 837,094 - GFF2148 0.13 -0.1 837,329 + GFF2148 0.41 -0.3 837,329 + GFF2148 0.41 +0.1 837,329 + GFF2148 0.41 +0.6 837,330 - GFF2148 0.41 +0.3 837,330 - GFF2148 0.41 -0.5 837,330 - GFF2148 0.41 -0.3 837,377 + GFF2148 0.47 -0.9 837,377 + GFF2148 0.47 -0.9 837,378 - GFF2148 0.47 +0.7 837,956 + +0.0 837,956 + +0.4 837,956 + +0.0 837,956 + -0.3 837,956 + -1.1 837,956 + +0.2 837,956 + -1.0 837,957 - +0.0 837,957 - +0.4 837,957 - +0.6 837,957 - -1.5 837,957 - +0.3 837,957 - -0.3 837,957 - -0.8 837,957 - +0.3 837,957 - -1.4 837,957 - -0.5 837,957 - -1.7 838,148 + +0.2 838,148 + -1.0 838,149 - +0.6 838,149 - -0.7 838,149 - -0.1 838,149 - -0.9 838,157 + -0.2 838,157 + -1.0 838,157 + +0.2 838,192 + GFF2149 0.13 -0.5 838,394 + GFF2149 0.40 -0.6 838,395 - GFF2149 0.40 -0.2 838,395 - GFF2149 0.40 -1.1 838,395 - GFF2149 0.40 -1.5 838,395 - GFF2149 0.40 -0.2 838,395 - GFF2149 0.40 +0.3 838,395 - GFF2149 0.40 +0.3 838,556 + GFF2149 0.62 +1.2 838,556 + GFF2149 0.62 -1.8 838,556 + GFF2149 0.62 +0.5 838,662 + GFF2149 0.76 +0.3 838,662 + GFF2149 0.76 -0.3 838,663 - GFF2149 0.76 -0.9 838,663 - GFF2149 0.76 -0.2 838,663 - GFF2149 0.76 -1.2 838,667 + GFF2149 0.77 -1.1 838,709 + GFF2149 0.83 -0.3 838,709 + GFF2149 0.83 -0.4 838,709 + GFF2149 0.83 +0.5 838,710 - GFF2149 0.83 -1.3 838,710 - GFF2149 0.83 -1.0 838,751 + GFF2149 0.88 +0.1 838,751 + GFF2149 0.88 -0.5 838,752 - GFF2149 0.88 -2.6 838,976 + -1.0 838,977 - +0.2 839,030 + +0.2 839,031 - +0.4 839,700 - GFF2150 0.37 -1.5
Or see this region's nucleotide sequence