Experiment: Methanol and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF2074 and GFF2075 are separated by 121 nucleotides GFF2075 and GFF2076 are separated by 110 nucleotides GFF2076 and GFF2077 are separated by 259 nucleotides
GFF2074 - hypothetical protein, at 754,919 to 755,578
GFF2074
GFF2075 - hypothetical protein, at 755,700 to 756,107
GFF2075
GFF2076 - hypothetical protein, at 756,218 to 757,093
GFF2076
GFF2077 - Protein adenylyltransferase SelO, at 757,353 to 758,864
GFF2077
Position (kb) 756
757
758 Strain fitness (log2 ratio) -2
-1
0
1
2 at 755.728 kb on + strand at 755.761 kb on + strand, within GFF2075 at 755.761 kb on + strand, within GFF2075 at 755.762 kb on - strand, within GFF2075 at 755.794 kb on + strand, within GFF2075 at 755.794 kb on + strand, within GFF2075 at 755.794 kb on + strand, within GFF2075 at 755.794 kb on + strand, within GFF2075 at 755.794 kb on + strand, within GFF2075 at 755.795 kb on - strand, within GFF2075 at 755.795 kb on - strand, within GFF2075 at 755.795 kb on - strand, within GFF2075 at 755.795 kb on - strand, within GFF2075 at 755.973 kb on + strand, within GFF2075 at 756.013 kb on - strand, within GFF2075 at 756.153 kb on + strand at 756.153 kb on + strand at 756.983 kb on + strand, within GFF2076 at 756.996 kb on - strand, within GFF2076 at 756.996 kb on - strand, within GFF2076 at 757.080 kb on - strand at 757.080 kb on - strand at 757.091 kb on + strand at 757.092 kb on - strand at 757.419 kb on + strand at 757.443 kb on + strand at 757.444 kb on - strand at 757.791 kb on + strand, within GFF2077 at 757.792 kb on - strand, within GFF2077 at 757.995 kb on + strand, within GFF2077 at 757.995 kb on + strand, within GFF2077 at 757.995 kb on + strand, within GFF2077 at 757.996 kb on - strand, within GFF2077 at 757.996 kb on - strand, within GFF2077 at 758.043 kb on + strand, within GFF2077
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol and casaminos (C) remove 755,728 + +0.2 755,761 + GFF2075 0.15 +0.3 755,761 + GFF2075 0.15 +1.0 755,762 - GFF2075 0.15 +1.2 755,794 + GFF2075 0.23 +0.4 755,794 + GFF2075 0.23 +0.1 755,794 + GFF2075 0.23 +0.3 755,794 + GFF2075 0.23 -0.5 755,794 + GFF2075 0.23 +0.0 755,795 - GFF2075 0.23 +0.4 755,795 - GFF2075 0.23 -0.5 755,795 - GFF2075 0.23 +0.4 755,795 - GFF2075 0.23 +0.0 755,973 + GFF2075 0.67 +1.8 756,013 - GFF2075 0.77 -0.9 756,153 + -0.8 756,153 + -0.7 756,983 + GFF2076 0.87 -0.1 756,996 - GFF2076 0.89 -1.3 756,996 - GFF2076 0.89 -0.5 757,080 - -0.2 757,080 - -0.6 757,091 + +0.6 757,092 - -0.4 757,419 + -1.8 757,443 + -0.7 757,444 - -0.5 757,791 + GFF2077 0.29 +0.8 757,792 - GFF2077 0.29 -0.1 757,995 + GFF2077 0.42 +0.3 757,995 + GFF2077 0.42 +0.0 757,995 + GFF2077 0.42 -0.2 757,996 - GFF2077 0.43 -0.7 757,996 - GFF2077 0.43 +0.3 758,043 + GFF2077 0.46 +0.3
Or see this region's nucleotide sequence