Experiment: Methanol and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF1819 and GFF1820 are separated by 219 nucleotides GFF1820 and GFF1821 are separated by 110 nucleotides GFF1821 and GFF1822 are separated by 140 nucleotides
GFF1819 - Putative membrane-bound redox modulator Alx, at 475,696 to 476,688
GFF1819
GFF1820 - hypothetical protein, at 476,908 to 477,129
GFF1820
GFF1821 - Hydrogen peroxide-inducible genes activator, at 477,240 to 478,160
GFF1821
GFF1822 - hypothetical protein, at 478,301 to 479,818
GFF1822
Position (kb) 477
478
479 Strain fitness (log2 ratio) -1
0
1 at 476.267 kb on + strand, within GFF1819 at 476.267 kb on + strand, within GFF1819 at 476.268 kb on - strand, within GFF1819 at 476.268 kb on - strand, within GFF1819 at 476.357 kb on + strand, within GFF1819 at 476.358 kb on - strand, within GFF1819 at 476.445 kb on + strand, within GFF1819 at 476.450 kb on + strand, within GFF1819 at 476.519 kb on + strand, within GFF1819 at 476.520 kb on - strand, within GFF1819 at 476.520 kb on - strand, within GFF1819 at 476.520 kb on - strand, within GFF1819 at 476.909 kb on + strand at 477.274 kb on - strand at 477.274 kb on - strand at 477.561 kb on + strand, within GFF1821 at 477.561 kb on + strand, within GFF1821 at 477.561 kb on + strand, within GFF1821 at 477.616 kb on + strand, within GFF1821 at 477.616 kb on + strand, within GFF1821 at 477.618 kb on + strand, within GFF1821 at 477.618 kb on + strand, within GFF1821 at 477.618 kb on + strand, within GFF1821 at 477.618 kb on + strand, within GFF1821 at 477.618 kb on + strand, within GFF1821 at 477.619 kb on - strand, within GFF1821 at 477.619 kb on - strand, within GFF1821 at 477.747 kb on + strand, within GFF1821 at 477.748 kb on - strand, within GFF1821 at 477.906 kb on + strand, within GFF1821 at 477.906 kb on + strand, within GFF1821 at 477.907 kb on - strand, within GFF1821 at 477.981 kb on + strand, within GFF1821 at 478.100 kb on - strand at 478.289 kb on + strand at 478.289 kb on + strand at 478.987 kb on + strand, within GFF1822 at 478.987 kb on + strand, within GFF1822 at 478.987 kb on + strand, within GFF1822 at 478.988 kb on - strand, within GFF1822 at 478.988 kb on - strand, within GFF1822 at 479.067 kb on + strand, within GFF1822 at 479.067 kb on + strand, within GFF1822 at 479.067 kb on + strand, within GFF1822
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol and casaminos (C) remove 476,267 + GFF1819 0.58 +0.3 476,267 + GFF1819 0.58 -0.3 476,268 - GFF1819 0.58 -0.5 476,268 - GFF1819 0.58 -0.9 476,357 + GFF1819 0.67 -0.1 476,358 - GFF1819 0.67 -0.9 476,445 + GFF1819 0.75 +0.1 476,450 + GFF1819 0.76 +0.2 476,519 + GFF1819 0.83 +0.1 476,520 - GFF1819 0.83 +0.1 476,520 - GFF1819 0.83 +0.2 476,520 - GFF1819 0.83 +0.3 476,909 + -0.7 477,274 - -0.2 477,274 - +0.0 477,561 + GFF1821 0.35 +0.7 477,561 + GFF1821 0.35 +0.3 477,561 + GFF1821 0.35 +1.2 477,616 + GFF1821 0.41 -0.5 477,616 + GFF1821 0.41 +0.7 477,618 + GFF1821 0.41 +0.8 477,618 + GFF1821 0.41 -0.1 477,618 + GFF1821 0.41 +0.0 477,618 + GFF1821 0.41 -0.3 477,618 + GFF1821 0.41 -0.3 477,619 - GFF1821 0.41 +0.0 477,619 - GFF1821 0.41 +0.5 477,747 + GFF1821 0.55 -1.0 477,748 - GFF1821 0.55 +0.0 477,906 + GFF1821 0.72 -0.9 477,906 + GFF1821 0.72 -0.5 477,907 - GFF1821 0.72 +0.8 477,981 + GFF1821 0.80 -0.7 478,100 - -0.2 478,289 + +0.9 478,289 + +0.1 478,987 + GFF1822 0.45 -0.7 478,987 + GFF1822 0.45 +1.1 478,987 + GFF1822 0.45 -0.2 478,988 - GFF1822 0.45 -1.7 478,988 - GFF1822 0.45 -0.3 479,067 + GFF1822 0.50 -0.7 479,067 + GFF1822 0.50 +0.0 479,067 + GFF1822 0.50 +0.4
Or see this region's nucleotide sequence