Experiment: Methanol and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF1760 and GFF1761 are separated by 65 nucleotides GFF1761 and GFF1762 are separated by 30 nucleotides GFF1762 and GFF1763 overlap by 4 nucleotides
GFF1760 - Glucans biosynthesis glucosyltransferase H, at 410,855 to 412,687
GFF1760
GFF1761 - hypothetical protein, at 412,753 to 413,763
GFF1761
GFF1762 - hypothetical protein, at 413,794 to 414,204
GFF1762
GFF1763 - D-inositol-3-phosphate glycosyltransferase, at 414,201 to 415,259
GFF1763
Position (kb) 412
413
414 Strain fitness (log2 ratio) -1
0
1 at 411.855 kb on + strand, within GFF1760 at 411.855 kb on + strand, within GFF1760 at 411.855 kb on + strand, within GFF1760 at 411.856 kb on - strand, within GFF1760 at 411.856 kb on - strand, within GFF1760 at 411.856 kb on - strand, within GFF1760 at 412.039 kb on - strand, within GFF1760 at 412.113 kb on + strand, within GFF1760 at 412.113 kb on + strand, within GFF1760 at 412.117 kb on - strand, within GFF1760 at 412.407 kb on + strand, within GFF1760 at 412.622 kb on - strand at 412.691 kb on + strand at 412.691 kb on + strand at 412.691 kb on + strand at 412.692 kb on - strand at 412.692 kb on - strand at 412.692 kb on - strand at 412.737 kb on + strand at 412.737 kb on - strand at 412.810 kb on + strand at 412.810 kb on + strand at 412.810 kb on + strand at 412.810 kb on + strand at 412.891 kb on + strand, within GFF1761 at 412.891 kb on + strand, within GFF1761 at 412.892 kb on - strand, within GFF1761 at 412.893 kb on + strand, within GFF1761 at 412.894 kb on - strand, within GFF1761 at 413.269 kb on + strand, within GFF1761 at 413.509 kb on + strand, within GFF1761 at 413.684 kb on - strand at 413.712 kb on + strand at 413.713 kb on - strand at 413.755 kb on + strand at 413.755 kb on + strand at 413.756 kb on - strand at 413.797 kb on + strand at 413.797 kb on + strand at 413.798 kb on - strand at 413.804 kb on + strand at 413.908 kb on + strand, within GFF1762 at 413.908 kb on + strand, within GFF1762 at 413.996 kb on - strand, within GFF1762 at 414.036 kb on + strand, within GFF1762 at 414.037 kb on - strand, within GFF1762 at 414.037 kb on - strand, within GFF1762 at 414.176 kb on - strand at 414.176 kb on - strand at 414.271 kb on - strand at 414.271 kb on - strand at 414.418 kb on + strand, within GFF1763 at 414.639 kb on + strand, within GFF1763
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol and casaminos (C) remove 411,855 + GFF1760 0.55 -0.1 411,855 + GFF1760 0.55 -0.9 411,855 + GFF1760 0.55 -0.1 411,856 - GFF1760 0.55 +0.5 411,856 - GFF1760 0.55 +1.6 411,856 - GFF1760 0.55 +0.8 412,039 - GFF1760 0.65 -0.2 412,113 + GFF1760 0.69 +1.4 412,113 + GFF1760 0.69 -0.7 412,117 - GFF1760 0.69 -0.2 412,407 + GFF1760 0.85 -0.3 412,622 - -0.2 412,691 + +0.1 412,691 + +0.2 412,691 + +0.1 412,692 - +0.4 412,692 - +0.2 412,692 - +0.5 412,737 + +0.4 412,737 - -0.4 412,810 + +1.2 412,810 + +0.5 412,810 + +0.1 412,810 + -0.2 412,891 + GFF1761 0.14 -1.1 412,891 + GFF1761 0.14 -1.0 412,892 - GFF1761 0.14 +0.0 412,893 + GFF1761 0.14 -0.7 412,894 - GFF1761 0.14 -1.1 413,269 + GFF1761 0.51 -0.3 413,509 + GFF1761 0.75 +0.1 413,684 - +0.7 413,712 + +0.1 413,713 - +1.2 413,755 + -0.2 413,755 + +0.5 413,756 - +0.2 413,797 + -0.6 413,797 + +0.1 413,798 - -0.0 413,804 + +0.3 413,908 + GFF1762 0.28 -0.4 413,908 + GFF1762 0.28 -0.1 413,996 - GFF1762 0.49 +0.5 414,036 + GFF1762 0.59 +0.2 414,037 - GFF1762 0.59 +0.9 414,037 - GFF1762 0.59 -0.7 414,176 - -1.4 414,176 - +0.9 414,271 - +0.4 414,271 - -0.9 414,418 + GFF1763 0.20 -0.2 414,639 + GFF1763 0.41 +0.0
Or see this region's nucleotide sequence