Experiment: Methanol and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF1457 and GFF1458 overlap by 4 nucleotides GFF1458 and GFF1459 overlap by 4 nucleotides
GFF1457 - Malto-oligosyltrehalose trehalohydrolase, at 92,747 to 94,498
GFF1457
GFF1458 - 4-alpha-glucanotransferase, at 94,495 to 96,528
GFF1458
GFF1459 - Maltooligosyl trehalose synthase, at 96,525 to 99,050
GFF1459
Position (kb) 94
95
96
97 Strain fitness (log2 ratio) -1
0
1 at 93.725 kb on + strand, within GFF1457 at 93.725 kb on + strand, within GFF1457 at 93.726 kb on - strand, within GFF1457 at 93.726 kb on - strand, within GFF1457 at 93.726 kb on - strand, within GFF1457 at 93.726 kb on - strand, within GFF1457 at 93.728 kb on + strand, within GFF1457 at 93.728 kb on + strand, within GFF1457 at 93.728 kb on + strand, within GFF1457 at 94.976 kb on - strand, within GFF1458 at 95.299 kb on + strand, within GFF1458 at 95.300 kb on - strand, within GFF1458 at 95.300 kb on - strand, within GFF1458 at 95.884 kb on + strand, within GFF1458 at 95.884 kb on + strand, within GFF1458 at 96.313 kb on + strand, within GFF1458 at 96.314 kb on - strand, within GFF1458 at 96.552 kb on + strand at 96.553 kb on - strand at 96.553 kb on - strand at 96.553 kb on - strand at 96.553 kb on - strand at 96.639 kb on + strand at 96.639 kb on + strand at 96.639 kb on + strand at 96.639 kb on + strand at 96.640 kb on - strand at 96.640 kb on - strand at 96.684 kb on + strand at 96.684 kb on + strand at 96.684 kb on + strand at 96.685 kb on - strand at 96.685 kb on - strand at 96.899 kb on + strand, within GFF1459 at 96.900 kb on - strand, within GFF1459 at 96.946 kb on - strand, within GFF1459 at 97.014 kb on + strand, within GFF1459 at 97.014 kb on + strand, within GFF1459 at 97.015 kb on - strand, within GFF1459 at 97.015 kb on - strand, within GFF1459 at 97.156 kb on - strand, within GFF1459
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol and casaminos (C) remove 93,725 + GFF1457 0.56 +1.6 93,725 + GFF1457 0.56 -0.6 93,726 - GFF1457 0.56 -0.5 93,726 - GFF1457 0.56 +0.2 93,726 - GFF1457 0.56 -0.6 93,726 - GFF1457 0.56 -1.3 93,728 + GFF1457 0.56 -0.3 93,728 + GFF1457 0.56 -0.2 93,728 + GFF1457 0.56 -0.3 94,976 - GFF1458 0.24 +0.1 95,299 + GFF1458 0.40 +0.9 95,300 - GFF1458 0.40 -0.8 95,300 - GFF1458 0.40 +0.4 95,884 + GFF1458 0.68 +0.3 95,884 + GFF1458 0.68 -1.1 96,313 + GFF1458 0.89 +0.4 96,314 - GFF1458 0.89 -0.2 96,552 + +0.9 96,553 - +0.1 96,553 - +0.2 96,553 - +0.7 96,553 - -0.5 96,639 + +0.0 96,639 + -0.6 96,639 + +0.1 96,639 + +1.7 96,640 - +0.4 96,640 - -0.2 96,684 + +0.9 96,684 + +0.2 96,684 + -0.5 96,685 - +0.4 96,685 - -0.3 96,899 + GFF1459 0.15 -0.1 96,900 - GFF1459 0.15 -0.6 96,946 - GFF1459 0.17 -0.1 97,014 + GFF1459 0.19 -0.3 97,014 + GFF1459 0.19 +0.3 97,015 - GFF1459 0.19 +0.6 97,015 - GFF1459 0.19 +1.2 97,156 - GFF1459 0.25 +0.3
Or see this region's nucleotide sequence