Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS19075

Experiment: biofilm; Day2; NLDM;

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	biofilm; Day2; NLDM;
200,485	-		LRK53_RS19065	0.34	-2.3
200,485	-		LRK53_RS19065	0.34	-2.3
200,787	+				+0.6
200,988	+		LRK53_RS19070	0.16	-1.7
200,988	+		LRK53_RS19070	0.16	+0.5
200,988	+		LRK53_RS19070	0.16	-1.3
200,989	-		LRK53_RS19070	0.16	-2.1
200,989	-		LRK53_RS19070	0.16	-2.0
200,989	-		LRK53_RS19070	0.16	-1.7
200,989	-		LRK53_RS19070	0.16	-1.6
200,989	-		LRK53_RS19070	0.16	+1.9
201,150	+		LRK53_RS19070	0.47	-1.3
201,168	+		LRK53_RS19070	0.50	+0.2
201,168	+		LRK53_RS19070	0.50	-2.6
201,168	+		LRK53_RS19070	0.50	-1.4
201,168	+		LRK53_RS19070	0.50	-0.8
201,168	+		LRK53_RS19070	0.50	-0.2
201,168	+		LRK53_RS19070	0.50	-1.1
201,168	+		LRK53_RS19070	0.50	-2.3
201,168	+		LRK53_RS19070	0.50	+0.7
201,168	+		LRK53_RS19070	0.50	-0.4
201,169	-		LRK53_RS19070	0.50	-0.1
201,169	-		LRK53_RS19070	0.50	-1.4
201,169	-		LRK53_RS19070	0.50	+1.1
201,169	-		LRK53_RS19070	0.50	-2.4
201,169	-		LRK53_RS19070	0.50	+0.4
201,169	-		LRK53_RS19070	0.50	-1.3
201,306	+		LRK53_RS19070	0.77	-0.7
201,306	+		LRK53_RS19070	0.77	-2.2
201,384	+				-1.5
201,384	+				+0.3
201,385	-				+0.5
201,385	-				-0.8
201,385	-				-1.3
201,385	-				-1.3
201,653	+		LRK53_RS19075	0.39	-0.8
201,653	+		LRK53_RS19075	0.39	-0.8
201,654	-		LRK53_RS19075	0.39	-2.8
201,654	-		LRK53_RS19075	0.39	-0.2
201,654	-		LRK53_RS19075	0.39	-2.4
201,657	-		LRK53_RS19075	0.40	-0.5
201,657	-		LRK53_RS19075	0.40	-0.7
201,657	-		LRK53_RS19075	0.40	+0.5
201,657	-		LRK53_RS19075	0.40	+0.3
201,657	-		LRK53_RS19075	0.40	-0.5
201,718	-		LRK53_RS19075	0.50	-0.7
201,834	-		LRK53_RS19075	0.70	-0.5
201,896	+		LRK53_RS19075	0.81	+0.2
201,896	+		LRK53_RS19075	0.81	-0.2
201,896	+		LRK53_RS19075	0.81	-1.3
201,896	+		LRK53_RS19075	0.81	+7.2
201,896	+		LRK53_RS19075	0.81	-1.3
201,897	-		LRK53_RS19075	0.81	-0.2
201,897	-		LRK53_RS19075	0.81	-0.3
201,897	-		LRK53_RS19075	0.81	-0.1
201,897	-		LRK53_RS19075	0.81	-1.5
201,897	-		LRK53_RS19075	0.81	-0.2
201,897	-		LRK53_RS19075	0.81	+0.7
201,897	-		LRK53_RS19075	0.81	-0.1
201,897	-		LRK53_RS19075	0.81	-1.7
202,029	+				+1.7
202,029	+				-1.6
202,029	+				-2.0
202,030	-				+0.3
202,030	-				-1.5
202,030	-				-1.5
202,037	+				-2.6
202,050	+				+0.2
202,050	+				+1.0
202,050	+				-0.6
202,051	-				-3.3
202,051	-				-2.1
202,051	-				+1.5
202,051	-				-0.4
202,051	-				-1.0
202,051	-				-0.3
202,120	+		LRK53_RS19080	0.20	-0.9
202,120	+		LRK53_RS19080	0.20	-1.8
202,121	-		LRK53_RS19080	0.20	-0.7
202,121	-		LRK53_RS19080	0.20	-1.6
202,151	+		LRK53_RS19080	0.26	-0.3
202,151	+		LRK53_RS19080	0.26	-1.6
202,151	+		LRK53_RS19080	0.26	+0.2
202,152	-		LRK53_RS19080	0.27	-0.3
202,152	-		LRK53_RS19080	0.27	-1.5
202,152	-		LRK53_RS19080	0.27	-0.7
202,152	-		LRK53_RS19080	0.27	-2.7
202,268	+		LRK53_RS19080	0.52	-1.7
202,268	+		LRK53_RS19080	0.52	-0.3
202,268	+		LRK53_RS19080	0.52	-0.2
202,268	+		LRK53_RS19080	0.52	+1.6
202,268	+		LRK53_RS19080	0.52	-0.9
202,269	-		LRK53_RS19080	0.52	-0.3
202,269	-		LRK53_RS19080	0.52	-1.9
202,269	-		LRK53_RS19080	0.52	+0.9
202,269	-		LRK53_RS19080	0.52	-0.8
202,362	+		LRK53_RS19080	0.72	-1.2
202,362	+		LRK53_RS19080	0.72	+1.2
202,363	-		LRK53_RS19080	0.73	-0.7
202,566	+				+0.8
202,566	+				+0.2
202,567	-				+0.9
202,617	+				-1.5
202,617	+				-0.1
202,617	+				+0.6
202,617	+				-2.7
202,617	+				-1.7
202,617	+				-1.0
202,617	+				-3.5
202,618	-				-1.4
202,618	-				-0.4
202,618	-				-0.8
202,719	-				-0.2
202,719	-				-0.1
202,726	-				-0.2
202,784	-		LRK53_RS19085	0.10	-2.0