Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS17970

Experiment: biofilm; Day2; NLDM;

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	biofilm; Day2; NLDM;
3,946,817	+		LRK53_RS17965	0.48	-0.4
3,946,817	+		LRK53_RS17965	0.48	-0.6
3,946,818	-		LRK53_RS17965	0.48	-3.3
3,946,818	-		LRK53_RS17965	0.48	-1.0
3,946,826	+		LRK53_RS17965	0.49	-0.6
3,946,826	+		LRK53_RS17965	0.49	-0.8
3,946,826	+		LRK53_RS17965	0.49	-0.2
3,946,826	+		LRK53_RS17965	0.49	-0.5
3,946,827	-		LRK53_RS17965	0.49	-0.9
3,946,827	-		LRK53_RS17965	0.49	+0.1
3,946,827	-		LRK53_RS17965	0.49	-0.1
3,946,827	-		LRK53_RS17965	0.49	-1.3
3,947,351	+				+0.1
3,947,351	+				-1.8
3,947,351	+				-0.3
3,947,351	+				+0.2
3,947,352	-				-2.2
3,947,372	+				+0.6
3,947,372	+				-0.6
3,947,372	+				+1.5
3,947,372	+				-1.7
3,947,373	-				-1.5
3,947,373	-				-0.1
3,947,373	-				-0.7
3,947,373	-				-0.9
3,947,373	-				-0.1
3,947,433	+				+0.0
3,947,433	+				-1.7
3,947,433	+				+2.2
3,947,433	+				-1.4
3,947,433	+				-0.6
3,947,434	-				-0.6
3,947,440	+				-0.9
3,947,440	+				-1.0
3,947,440	+				-0.8
3,947,440	+				-1.5
3,947,440	+				-0.5
3,947,441	-				-0.5
3,947,441	-				-2.3
3,947,441	-				-1.2
3,947,441	-				-2.0
3,947,441	-				-3.0
3,947,441	-				+0.2
3,947,460	+				-1.4
3,947,461	-				-0.3
3,947,461	-				-1.9
3,947,478	+				-0.7
3,947,498	+				-1.3
3,947,498	+				+0.4
3,947,519	+				-0.4
3,947,519	+				+0.4
3,947,519	+				-0.5
3,947,519	+				-0.7
3,947,519	+				+0.5
3,947,519	+				+0.1
3,947,519	+				+0.3
3,947,519	+				-0.3
3,947,519	+				-1.7
3,947,519	+				+0.6
3,947,519	+				-2.6
3,947,519	+				-1.2
3,947,519	+				+0.8
3,947,519	+				+0.1
3,947,519	+				-0.9
3,947,519	+				+0.1
3,947,520	-				-1.3
3,947,520	-				+2.3
3,947,520	-				+1.1
3,947,520	-				-2.1
3,947,520	-				-0.7
3,947,520	-				-0.1
3,947,520	-				-0.3
3,947,520	-				-0.4
3,947,520	-				+0.8
3,947,520	-				+0.4
3,947,520	-				-0.4
3,947,520	-				+0.0
3,947,520	-				-1.4
3,947,520	-				-1.2
3,947,520	-				+2.3
3,947,520	-				-0.4
3,947,520	-				-0.9
3,947,520	-				-0.3
3,947,726	-		LRK53_RS17970	0.33	-0.8
3,947,793	+		LRK53_RS17970	0.44	-0.1
3,947,793	+		LRK53_RS17970	0.44	-0.6
3,947,793	+		LRK53_RS17970	0.44	-0.7
3,947,793	+		LRK53_RS17970	0.44	-0.8
3,947,793	+		LRK53_RS17970	0.44	-2.0
3,947,793	+		LRK53_RS17970	0.44	-1.0
3,947,794	-		LRK53_RS17970	0.44	-0.4
3,947,794	-		LRK53_RS17970	0.44	+0.4
3,947,794	-		LRK53_RS17970	0.44	-0.1
3,947,794	-		LRK53_RS17970	0.44	-1.7
3,947,794	-		LRK53_RS17970	0.44	+0.1
3,947,794	-		LRK53_RS17970	0.44	-0.3
3,947,794	-		LRK53_RS17970	0.44	-1.4
3,947,794	-		LRK53_RS17970	0.44	-1.8
3,947,794	-		LRK53_RS17970	0.44	-1.7
3,947,794	-		LRK53_RS17970	0.44	+0.7
3,947,794	-		LRK53_RS17970	0.44	-1.3
3,948,033	+		LRK53_RS17970	0.82	-0.2
3,948,033	+		LRK53_RS17970	0.82	-2.1
3,948,033	+		LRK53_RS17970	0.82	-1.0
3,948,033	+		LRK53_RS17970	0.82	+0.1
3,948,033	+		LRK53_RS17970	0.82	+0.1
3,948,033	+		LRK53_RS17970	0.82	+0.1
3,948,033	+		LRK53_RS17970	0.82	+1.1
3,948,033	+		LRK53_RS17970	0.82	-1.5
3,948,033	+		LRK53_RS17970	0.82	-0.8
3,948,033	+		LRK53_RS17970	0.82	-1.6
3,948,033	+		LRK53_RS17970	0.82	-1.1
3,948,033	+		LRK53_RS17970	0.82	-2.5
3,948,033	+		LRK53_RS17970	0.82	-0.8
3,948,033	+		LRK53_RS17970	0.82	-1.9
3,948,033	+		LRK53_RS17970	0.82	+0.6
3,948,033	+		LRK53_RS17970	0.82	-0.7
3,948,033	+		LRK53_RS17970	0.82	-0.5
3,948,033	+		LRK53_RS17970	0.82	-0.6
3,948,033	+		LRK53_RS17970	0.82	+0.4
3,948,033	+		LRK53_RS17970	0.82	-1.8
3,948,034	-		LRK53_RS17970	0.82	-0.4
3,948,034	-		LRK53_RS17970	0.82	-1.8
3,948,034	-		LRK53_RS17970	0.82	-1.0
3,948,034	-		LRK53_RS17970	0.82	-2.3
3,948,034	-		LRK53_RS17970	0.82	-0.5
3,948,034	-		LRK53_RS17970	0.82	-0.5
3,948,034	-		LRK53_RS17970	0.82	-0.1
3,948,034	-		LRK53_RS17970	0.82	+0.6
3,948,034	-		LRK53_RS17970	0.82	-2.4
3,948,034	-		LRK53_RS17970	0.82	-0.8
3,948,034	-		LRK53_RS17970	0.82	+1.9
3,948,034	-		LRK53_RS17970	0.82	-0.8
3,948,034	-		LRK53_RS17970	0.82	-0.8
3,948,034	-		LRK53_RS17970	0.82	-1.5
3,948,034	-		LRK53_RS17970	0.82	-0.7
3,948,072	+		LRK53_RS17970	0.88	-0.1
3,948,072	+		LRK53_RS17970	0.88	-1.9
3,948,073	-		LRK53_RS17970	0.88	-0.1
3,948,073	-		LRK53_RS17970	0.88	-1.7
3,948,449	-		LRK53_RS17975	0.52	-0.5
3,948,749	+				-1.3
3,948,750	-				+0.4
3,948,801	+				+0.1
3,948,801	+				-1.7
3,948,802	-				+1.5
3,948,802	-				+0.1
3,948,802	-				-0.6
3,948,802	-				-0.5
3,949,068	+		LRK53_RS17980	0.16	-0.8
3,949,069	-		LRK53_RS17980	0.16	+0.0
3,949,069	-		LRK53_RS17980	0.16	+1.1
3,949,069	-		LRK53_RS17980	0.16	-2.6
3,949,069	-		LRK53_RS17980	0.16	+0.4
3,949,076	+		LRK53_RS17980	0.17	-1.8
3,949,076	+		LRK53_RS17980	0.17	-0.6
3,949,076	+		LRK53_RS17980	0.17	-0.8
3,949,076	+		LRK53_RS17980	0.17	-0.1
3,949,076	+		LRK53_RS17980	0.17	-1.0
3,949,076	+		LRK53_RS17980	0.17	+0.2
3,949,076	+		LRK53_RS17980	0.17	-0.3
3,949,076	+		LRK53_RS17980	0.17	+0.1
3,949,076	+		LRK53_RS17980	0.17	-1.4
3,949,077	-		LRK53_RS17980	0.17	-0.7
3,949,077	-		LRK53_RS17980	0.17	-0.2
3,949,077	-		LRK53_RS17980	0.17	+1.9
3,949,077	-		LRK53_RS17980	0.17	+0.3
3,949,077	-		LRK53_RS17980	0.17	+1.1
3,949,077	-		LRK53_RS17980	0.17	+0.5
3,949,077	-		LRK53_RS17980	0.17	-1.0