Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS16380

Experiment: biofilm; Day2; NLDM;

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	biofilm; Day2; NLDM;
3,604,432	+		LRK53_RS16375	0.30	+1.1
3,604,432	+		LRK53_RS16375	0.30	-0.3
3,604,432	+		LRK53_RS16375	0.30	-0.8
3,604,432	+		LRK53_RS16375	0.30	+0.3
3,604,432	+		LRK53_RS16375	0.30	-0.7
3,604,432	+		LRK53_RS16375	0.30	+0.7
3,604,432	+		LRK53_RS16375	0.30	-0.7
3,604,432	+		LRK53_RS16375	0.30	-1.6
3,604,432	+		LRK53_RS16375	0.30	-1.8
3,604,432	+		LRK53_RS16375	0.30	-0.7
3,604,432	+		LRK53_RS16375	0.30	+1.7
3,604,432	+		LRK53_RS16375	0.30	-0.5
3,604,433	-		LRK53_RS16375	0.30	-1.7
3,604,433	-		LRK53_RS16375	0.30	-0.5
3,604,433	-		LRK53_RS16375	0.30	-2.0
3,604,433	-		LRK53_RS16375	0.30	-0.4
3,604,433	-		LRK53_RS16375	0.30	-0.9
3,604,433	-		LRK53_RS16375	0.30	-2.5
3,604,433	-		LRK53_RS16375	0.30	-0.7
3,604,433	-		LRK53_RS16375	0.30	+0.5
3,604,433	-		LRK53_RS16375	0.30	-1.0
3,604,433	-		LRK53_RS16375	0.30	-0.4
3,604,433	-		LRK53_RS16375	0.30	-0.7
3,604,433	-		LRK53_RS16375	0.30	-0.7
3,604,433	-		LRK53_RS16375	0.30	-0.8
3,604,541	+		LRK53_RS16375	0.38	+0.3
3,604,541	+		LRK53_RS16375	0.38	-2.7
3,604,541	+		LRK53_RS16375	0.38	-0.6
3,604,541	+		LRK53_RS16375	0.38	-0.9
3,604,588	+		LRK53_RS16375	0.41	+2.3
3,604,588	+		LRK53_RS16375	0.41	-1.8
3,604,588	+		LRK53_RS16375	0.41	-0.3
3,604,588	+		LRK53_RS16375	0.41	-0.0
3,604,589	-		LRK53_RS16375	0.41	+0.3
3,604,589	-		LRK53_RS16375	0.41	+0.4
3,604,589	-		LRK53_RS16375	0.41	-0.3
3,604,589	-		LRK53_RS16375	0.41	+0.5
3,604,589	-		LRK53_RS16375	0.41	-0.8
3,604,624	+		LRK53_RS16375	0.44	-0.5
3,604,624	+		LRK53_RS16375	0.44	-0.2
3,604,663	+		LRK53_RS16375	0.47	-2.3
3,604,663	+		LRK53_RS16375	0.47	-2.3
3,604,663	+		LRK53_RS16375	0.47	-0.1
3,604,664	-		LRK53_RS16375	0.47	-0.9
3,604,664	-		LRK53_RS16375	0.47	-0.2
3,604,681	+		LRK53_RS16375	0.48	+0.3
3,604,681	+		LRK53_RS16375	0.48	-0.5
3,604,681	+		LRK53_RS16375	0.48	-0.5
3,604,681	+		LRK53_RS16375	0.48	-0.5
3,604,681	+		LRK53_RS16375	0.48	-0.9
3,604,682	-		LRK53_RS16375	0.48	-0.4
3,604,682	-		LRK53_RS16375	0.48	-1.7
3,604,682	-		LRK53_RS16375	0.48	-0.4
3,604,682	-		LRK53_RS16375	0.48	+0.8
3,604,682	-		LRK53_RS16375	0.48	-0.4
3,604,682	-		LRK53_RS16375	0.48	+0.1
3,604,703	-		LRK53_RS16375	0.49	+0.3
3,605,009	+		LRK53_RS16375	0.71	-2.0
3,605,009	+		LRK53_RS16375	0.71	+0.4
3,605,010	-		LRK53_RS16375	0.71	-1.2
3,605,082	+		LRK53_RS16375	0.76	-0.4
3,605,082	+		LRK53_RS16375	0.76	-0.5
3,605,082	+		LRK53_RS16375	0.76	-1.0
3,605,083	-		LRK53_RS16375	0.76	+1.4
3,605,083	-		LRK53_RS16375	0.76	+0.8
3,605,083	-		LRK53_RS16375	0.76	-2.1
3,605,083	-		LRK53_RS16375	0.76	-1.4
3,605,083	-		LRK53_RS16375	0.76	-0.1
3,605,083	-		LRK53_RS16375	0.76	-1.0
3,605,252	+		LRK53_RS16375	0.88	+0.7
3,605,252	+		LRK53_RS16375	0.88	-0.4
3,605,310	-				-0.8
3,605,310	-				-2.6
3,605,310	-				+1.1
3,605,310	-				+0.2
3,605,310	-				-0.2
3,605,310	-				+0.1
3,605,310	-				+0.8
3,605,338	+				+0.2
3,605,338	+				-0.5
3,605,338	+				-0.2
3,605,338	+				-1.7
3,605,339	-				-1.0
3,605,339	-				-0.9
3,605,399	-				-0.0
3,605,426	-				-0.9
3,605,426	-				-0.9
3,605,426	-				+0.8
3,605,426	-				-0.3
3,605,429	+				+0.2
3,605,429	+				-0.3
3,605,429	+				-0.7
3,605,429	+				+1.1
3,605,429	+				-1.4
3,605,429	+				-1.7
3,605,429	+				+0.3
3,605,429	+				-0.7
3,605,430	-				-1.7
3,605,430	-				-1.6
3,605,430	-				-1.2
3,605,430	-				-1.3
3,605,430	-				+0.2
3,605,430	-				-0.3
3,605,431	+				+0.8
3,605,446	+				-1.6
3,605,446	+				+0.0
3,605,446	+				-0.1
3,605,447	-				-2.1
3,605,447	-				-1.9
3,605,447	-				-0.3
3,605,447	-				-3.4
3,605,488	+		LRK53_RS16380	0.17	-0.2
3,605,488	+		LRK53_RS16380	0.17	-1.2
3,605,488	+		LRK53_RS16380	0.17	-0.8
3,605,488	+		LRK53_RS16380	0.17	+1.2
3,605,488	+		LRK53_RS16380	0.17	-0.2
3,605,488	+		LRK53_RS16380	0.17	+1.2
3,605,488	+		LRK53_RS16380	0.17	+0.5
3,605,489	-		LRK53_RS16380	0.18	+0.1
3,605,489	-		LRK53_RS16380	0.18	-3.1
3,605,489	-		LRK53_RS16380	0.18	-0.7
3,605,489	-		LRK53_RS16380	0.18	-0.0
3,605,489	-		LRK53_RS16380	0.18	-0.8
3,605,489	-		LRK53_RS16380	0.18	-2.1
3,605,489	-		LRK53_RS16380	0.18	-0.5
3,605,489	-		LRK53_RS16380	0.18	+0.3
3,605,489	-		LRK53_RS16380	0.18	+0.4
3,605,489	-		LRK53_RS16380	0.18	-0.4
3,605,489	-		LRK53_RS16380	0.18	-2.4
3,605,489	-		LRK53_RS16380	0.18	-0.5
3,605,665	+		LRK53_RS16380	0.66	+0.4
3,605,665	+		LRK53_RS16380	0.66	-1.4
3,605,665	+		LRK53_RS16380	0.66	+1.5
3,605,665	+		LRK53_RS16380	0.66	-1.4
3,605,665	+		LRK53_RS16380	0.66	-0.2
3,605,665	+		LRK53_RS16380	0.66	-0.3
3,605,665	+		LRK53_RS16380	0.66	-0.2
3,605,665	+		LRK53_RS16380	0.66	+1.0
3,605,666	-		LRK53_RS16380	0.66	-0.6
3,605,666	-		LRK53_RS16380	0.66	+0.4
3,605,666	-		LRK53_RS16380	0.66	+0.5
3,605,666	-		LRK53_RS16380	0.66	-0.4
3,605,666	-		LRK53_RS16380	0.66	-0.3
3,605,666	-		LRK53_RS16380	0.66	-1.8
3,605,762	+				-1.9
3,605,763	-				+1.1
3,605,763	-				-0.3
3,605,810	+				-0.1
3,605,810	+				-0.5
3,605,810	+				-2.9
3,605,810	+				-0.3
3,605,810	+				-0.4
3,605,810	+				-2.1
3,605,810	+				-1.4
3,605,810	+				-1.3
3,605,810	+				+0.9
3,605,811	-				-2.5
3,605,811	-				-0.0
3,605,811	-				-0.8
3,605,811	-				+0.0
3,605,811	-				+0.8
3,605,811	-				+0.2
3,605,884	+		LRK53_RS16385	0.21	+0.4
3,605,884	+		LRK53_RS16385	0.21	+0.8
3,605,884	+		LRK53_RS16385	0.21	+0.2
3,605,884	+		LRK53_RS16385	0.21	-0.9
3,605,884	+		LRK53_RS16385	0.21	-0.2
3,605,884	+		LRK53_RS16385	0.21	+0.9
3,605,885	-		LRK53_RS16385	0.21	+0.3
3,605,885	-		LRK53_RS16385	0.21	-0.3
3,605,885	-		LRK53_RS16385	0.21	-1.0
3,605,885	-		LRK53_RS16385	0.21	-1.3
3,605,944	-		LRK53_RS16385	0.31	-1.6
3,605,944	-		LRK53_RS16385	0.31	-0.0
3,605,984	+		LRK53_RS16385	0.38	-0.9
3,605,984	+		LRK53_RS16385	0.38	-0.3
3,605,984	+		LRK53_RS16385	0.38	-3.6
3,605,984	+		LRK53_RS16385	0.38	-1.8
3,605,984	+		LRK53_RS16385	0.38	+0.3
3,605,985	-		LRK53_RS16385	0.38	-0.7
3,605,985	-		LRK53_RS16385	0.38	-1.7
3,606,136	+		LRK53_RS16385	0.63	-0.5
3,606,136	+		LRK53_RS16385	0.63	-0.8
3,606,161	+		LRK53_RS16385	0.67	-1.4
3,606,161	+		LRK53_RS16385	0.67	-1.3
3,606,161	+		LRK53_RS16385	0.67	-0.2
3,606,161	+		LRK53_RS16385	0.67	-0.1
3,606,161	+		LRK53_RS16385	0.67	-0.7
3,606,161	+		LRK53_RS16385	0.67	-1.3
3,606,161	+		LRK53_RS16385	0.67	-0.9
3,606,161	+		LRK53_RS16385	0.67	+1.2
3,606,161	+		LRK53_RS16385	0.67	-1.3
3,606,161	+		LRK53_RS16385	0.67	-0.3
3,606,161	+		LRK53_RS16385	0.67	-0.8
3,606,161	+		LRK53_RS16385	0.67	-1.6
3,606,162	-		LRK53_RS16385	0.68	+0.9
3,606,162	-		LRK53_RS16385	0.68	-1.2
3,606,162	-		LRK53_RS16385	0.68	-0.9
3,606,162	-		LRK53_RS16385	0.68	-0.2
3,606,162	-		LRK53_RS16385	0.68	-0.3
3,606,162	-		LRK53_RS16385	0.68	-1.2
3,606,162	-		LRK53_RS16385	0.68	-0.0
3,606,162	-		LRK53_RS16385	0.68	-2.3
3,606,162	-		LRK53_RS16385	0.68	-0.5
3,606,162	-		LRK53_RS16385	0.68	+0.8
3,606,162	-		LRK53_RS16385	0.68	-0.8
3,606,176	+		LRK53_RS16385	0.70	+1.7
3,606,176	+		LRK53_RS16385	0.70	+0.7
3,606,177	-		LRK53_RS16385	0.70	+0.2
3,606,268	+		LRK53_RS16385	0.85	+0.6
3,606,279	+		LRK53_RS16385	0.87	+0.0
3,606,387	+				-1.7
3,606,511	-				-0.1
3,606,589	+		LRK53_RS16390	0.12	+0.2
3,606,589	+		LRK53_RS16390	0.12	+2.2
3,606,589	+		LRK53_RS16390	0.12	-2.5
3,606,589	+		LRK53_RS16390	0.12	+0.8
3,606,589	+		LRK53_RS16390	0.12	-0.2
3,606,589	+		LRK53_RS16390	0.12	-1.0
3,606,589	+		LRK53_RS16390	0.12	-0.6
3,606,589	+		LRK53_RS16390	0.12	-1.0
3,606,590	-		LRK53_RS16390	0.12	-1.0
3,606,590	-		LRK53_RS16390	0.12	-0.3
3,606,590	-		LRK53_RS16390	0.12	-0.6
3,606,590	-		LRK53_RS16390	0.12	+0.7
3,606,590	-		LRK53_RS16390	0.12	-1.6
3,606,590	-		LRK53_RS16390	0.12	-3.6
3,606,590	-		LRK53_RS16390	0.12	+0.2
3,606,590	-		LRK53_RS16390	0.12	-1.0
3,606,590	-		LRK53_RS16390	0.12	-1.3
3,606,590	-		LRK53_RS16390	0.12	+0.8
3,606,590	-		LRK53_RS16390	0.12	-1.7
3,606,590	-		LRK53_RS16390	0.12	+0.1
3,606,590	-		LRK53_RS16390	0.12	+1.3
3,606,590	-		LRK53_RS16390	0.12	+0.7
3,606,590	-		LRK53_RS16390	0.12	-2.0
3,606,590	-		LRK53_RS16390	0.12	-1.0
3,606,590	-		LRK53_RS16390	0.12	-1.3
3,606,590	-		LRK53_RS16390	0.12	+0.5
3,606,590	-		LRK53_RS16390	0.12	+0.0
3,606,590	-		LRK53_RS16390	0.12	+0.1
3,606,590	-		LRK53_RS16390	0.12	+0.4
3,606,590	-		LRK53_RS16390	0.12	-0.8
3,606,601	+		LRK53_RS16390	0.12	+0.5
3,606,601	+		LRK53_RS16390	0.12	-3.2
3,606,602	-		LRK53_RS16390	0.13	-0.9
3,606,602	-		LRK53_RS16390	0.13	-0.1
3,606,602	-		LRK53_RS16390	0.13	-1.0
3,606,602	-		LRK53_RS16390	0.13	+0.5
3,606,602	-		LRK53_RS16390	0.13	+1.0
3,606,602	-		LRK53_RS16390	0.13	-1.4
3,606,654	+		LRK53_RS16390	0.15	+0.2
3,606,655	-		LRK53_RS16390	0.15	-0.7
3,606,655	-		LRK53_RS16390	0.15	-0.6
3,606,662	+		LRK53_RS16390	0.16	+0.1
3,606,723	+		LRK53_RS16390	0.19	+1.3
3,606,753	+		LRK53_RS16390	0.21	-0.5
3,606,754	-		LRK53_RS16390	0.21	+0.1