Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS15200

Experiment: biofilm; Day2; NLDM;

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	biofilm; Day2; NLDM;
3,316,048	+		LRK53_RS15190	0.21	-1.3
3,316,049	-		LRK53_RS15190	0.21	-0.2
3,316,150	+		LRK53_RS15190	0.35	-1.6
3,316,151	-		LRK53_RS15190	0.35	-0.6
3,316,151	-		LRK53_RS15190	0.35	+1.2
3,316,151	-		LRK53_RS15190	0.35	-2.5
3,316,151	-		LRK53_RS15190	0.35	+0.3
3,316,345	+		LRK53_RS15190	0.62	+0.2
3,316,345	+		LRK53_RS15190	0.62	+1.9
3,316,346	-		LRK53_RS15190	0.62	+0.0
3,316,346	-		LRK53_RS15190	0.62	-1.9
3,316,346	-		LRK53_RS15190	0.62	-1.0
3,316,346	-		LRK53_RS15190	0.62	-0.6
3,316,346	-		LRK53_RS15190	0.62	-2.2
3,316,496	+		LRK53_RS15190	0.82	-0.8
3,316,496	+		LRK53_RS15190	0.82	-0.7
3,316,696	+				-0.6
3,316,697	-				-1.4
3,316,732	+				-0.8
3,316,732	+				+0.3
3,316,732	+				+0.7
3,316,732	+				-0.4
3,316,732	+				-0.4
3,316,732	+				-2.1
3,316,732	+				-1.3
3,316,733	-				-0.2
3,316,733	-				-1.5
3,316,973	+		LRK53_RS15195	0.76	-0.2
3,316,973	+		LRK53_RS15195	0.76	-0.4
3,316,973	+		LRK53_RS15195	0.76	-1.3
3,316,973	+		LRK53_RS15195	0.76	-1.8
3,316,973	+		LRK53_RS15195	0.76	-1.9
3,316,973	+		LRK53_RS15195	0.76	-0.7
3,316,973	+		LRK53_RS15195	0.76	-0.4
3,316,973	+		LRK53_RS15195	0.76	-2.1
3,316,974	-		LRK53_RS15195	0.76	+2.6
3,316,974	-		LRK53_RS15195	0.76	-1.0
3,316,974	-		LRK53_RS15195	0.76	-3.1
3,316,974	-		LRK53_RS15195	0.76	-0.1
3,316,974	-		LRK53_RS15195	0.76	-0.7
3,316,974	-		LRK53_RS15195	0.76	-0.1
3,316,974	-		LRK53_RS15195	0.76	+1.0
3,316,974	-		LRK53_RS15195	0.76	-0.7
3,317,326	+		LRK53_RS15200	0.62	-0.8
3,317,327	-		LRK53_RS15200	0.63	-2.6
3,317,434	+		LRK53_RS15200	0.87	-1.1
3,317,489	+				-0.8
3,317,489	+				-1.1
3,317,490	-				-0.7
3,318,177	+		LRK53_RS15205	0.45	-0.9
3,318,177	+		LRK53_RS15205	0.45	-1.5
3,318,177	+		LRK53_RS15205	0.45	-0.2
3,318,177	+		LRK53_RS15205	0.45	+0.3
3,318,178	-		LRK53_RS15205	0.45	+0.6
3,318,178	-		LRK53_RS15205	0.45	-0.1
3,318,222	+		LRK53_RS15205	0.48	-0.4
3,318,358	+		LRK53_RS15205	0.59	-0.4
3,318,358	+		LRK53_RS15205	0.59	+1.6
3,318,359	-		LRK53_RS15205	0.59	-1.1
3,318,366	+		LRK53_RS15205	0.60	-1.0
3,318,366	+		LRK53_RS15205	0.60	-0.1
3,318,366	+		LRK53_RS15205	0.60	-0.8
3,318,366	+		LRK53_RS15205	0.60	-0.5
3,318,366	+		LRK53_RS15205	0.60	+0.8
3,318,366	+		LRK53_RS15205	0.60	-0.4
3,318,367	-		LRK53_RS15205	0.60	-0.7
3,318,367	-		LRK53_RS15205	0.60	-1.4
3,318,367	-		LRK53_RS15205	0.60	+0.6
3,318,367	-		LRK53_RS15205	0.60	-0.5
3,318,367	-		LRK53_RS15205	0.60	-2.1
3,318,367	-		LRK53_RS15205	0.60	-1.7
3,318,367	-		LRK53_RS15205	0.60	+1.0
3,318,367	-		LRK53_RS15205	0.60	-1.4
3,318,367	-		LRK53_RS15205	0.60	+0.3
3,318,367	-		LRK53_RS15205	0.60	-0.9
3,318,367	-		LRK53_RS15205	0.60	+0.3
3,318,396	+		LRK53_RS15205	0.62	-0.3
3,318,396	+		LRK53_RS15205	0.62	+0.5
3,318,397	-		LRK53_RS15205	0.62	+0.2
3,318,397	-		LRK53_RS15205	0.62	-1.8