Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS14690

Experiment: biofilm; Day2; NLDM;

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	biofilm; Day2; NLDM;
3,216,335	+		LRK53_RS14685	0.14	+0.5
3,216,336	-		LRK53_RS14685	0.14	-0.2
3,216,336	-		LRK53_RS14685	0.14	-0.6
3,216,336	-		LRK53_RS14685	0.14	+1.0
3,216,336	-		LRK53_RS14685	0.14	-1.6
3,216,651	-		LRK53_RS14685	0.57	-0.8
3,216,651	-		LRK53_RS14685	0.57	-1.0
3,216,978	+				+0.2
3,216,978	+				+0.1
3,216,979	-				+0.2
3,216,979	-				-1.6
3,216,981	+				-0.2
3,216,981	+				+0.1
3,216,981	+				-1.6
3,216,981	+				-2.6
3,216,981	+				+0.1
3,216,981	+				+2.0
3,216,981	+				-1.2
3,216,981	+				-1.1
3,216,982	-				-1.5
3,216,982	-				-0.0
3,216,982	-				-2.0
3,216,982	-				+1.9
3,216,982	-				+1.1
3,216,982	-				-1.2
3,216,982	-				-0.4
3,216,982	-				+0.5
3,216,982	-				+0.2
3,216,982	-				-0.7
3,217,009	+				-1.0
3,217,009	+				-1.8
3,217,009	+				-1.2
3,217,010	-				+1.0
3,217,010	-				-0.4
3,217,010	-				-0.4
3,217,062	+				+1.4
3,217,062	+				-1.5
3,217,062	+				-1.0
3,217,070	+				-1.9
3,217,070	+				-0.9
3,217,070	+				-1.4
3,217,131	+		LRK53_RS14690	0.12	-0.6
3,217,131	+		LRK53_RS14690	0.12	-0.8
3,217,131	+		LRK53_RS14690	0.12	-1.1
3,217,131	+		LRK53_RS14690	0.12	-0.4
3,217,132	-		LRK53_RS14690	0.12	-0.6
3,217,132	-		LRK53_RS14690	0.12	-0.4
3,217,176	+		LRK53_RS14690	0.19	+0.6
3,217,176	+		LRK53_RS14690	0.19	+0.2
3,217,176	+		LRK53_RS14690	0.19	-1.2
3,217,177	-		LRK53_RS14690	0.19	-0.5
3,217,177	-		LRK53_RS14690	0.19	-0.6
3,217,177	-		LRK53_RS14690	0.19	+0.4
3,217,177	-		LRK53_RS14690	0.19	-1.3
3,217,275	+		LRK53_RS14690	0.34	+1.0
3,217,275	+		LRK53_RS14690	0.34	+0.0
3,217,275	+		LRK53_RS14690	0.34	-0.5
3,217,275	+		LRK53_RS14690	0.34	-1.2
3,217,275	+		LRK53_RS14690	0.34	-0.9
3,217,275	+		LRK53_RS14690	0.34	+0.2
3,217,275	+		LRK53_RS14690	0.34	-0.8
3,217,275	+		LRK53_RS14690	0.34	-0.9
3,217,275	+		LRK53_RS14690	0.34	+0.6
3,217,275	+		LRK53_RS14690	0.34	-0.9
3,217,275	+		LRK53_RS14690	0.34	-0.8
3,217,275	+		LRK53_RS14690	0.34	-0.7
3,217,275	+		LRK53_RS14690	0.34	-0.6
3,217,275	+		LRK53_RS14690	0.34	-1.4
3,217,276	-		LRK53_RS14690	0.34	-1.0
3,217,276	-		LRK53_RS14690	0.34	+1.8
3,217,276	-		LRK53_RS14690	0.34	-0.1
3,217,276	-		LRK53_RS14690	0.34	-2.2
3,217,276	-		LRK53_RS14690	0.34	-0.4
3,217,276	-		LRK53_RS14690	0.34	-0.5
3,217,276	-		LRK53_RS14690	0.34	+0.3
3,217,276	-		LRK53_RS14690	0.34	-2.1
3,217,276	-		LRK53_RS14690	0.34	-0.8
3,217,276	-		LRK53_RS14690	0.34	-0.7
3,217,276	-		LRK53_RS14690	0.34	-1.1
3,217,411	+		LRK53_RS14690	0.54	-0.4
3,217,411	+		LRK53_RS14690	0.54	-1.2
3,217,411	+		LRK53_RS14690	0.54	-2.5
3,217,411	+		LRK53_RS14690	0.54	-1.4
3,217,411	+		LRK53_RS14690	0.54	-1.5
3,217,411	+		LRK53_RS14690	0.54	+0.0
3,217,411	+		LRK53_RS14690	0.54	-2.6
3,217,411	+		LRK53_RS14690	0.54	-1.3
3,217,411	+		LRK53_RS14690	0.54	-2.3
3,217,411	+		LRK53_RS14690	0.54	-0.3
3,217,411	+		LRK53_RS14690	0.54	+0.3
3,217,411	+		LRK53_RS14690	0.54	+1.0
3,217,412	-		LRK53_RS14690	0.55	+0.2
3,217,412	-		LRK53_RS14690	0.55	+0.8
3,217,412	-		LRK53_RS14690	0.55	-1.9
3,217,413	+		LRK53_RS14690	0.55	-1.2
3,217,413	+		LRK53_RS14690	0.55	-1.5
3,217,413	+		LRK53_RS14690	0.55	-1.9
3,217,413	+		LRK53_RS14690	0.55	-1.1
3,217,413	+		LRK53_RS14690	0.55	-2.3
3,217,413	+		LRK53_RS14690	0.55	-2.2
3,217,413	+		LRK53_RS14690	0.55	+0.4
3,217,413	+		LRK53_RS14690	0.55	+0.0
3,217,413	+		LRK53_RS14690	0.55	-1.1
3,217,413	+		LRK53_RS14690	0.55	-0.3
3,217,413	+		LRK53_RS14690	0.55	-0.9
3,217,413	+		LRK53_RS14690	0.55	+0.6
3,217,413	+		LRK53_RS14690	0.55	-0.5
3,217,413	+		LRK53_RS14690	0.55	-0.4
3,217,413	+		LRK53_RS14690	0.55	+2.3
3,217,413	+		LRK53_RS14690	0.55	-0.3
3,217,414	-		LRK53_RS14690	0.55	-1.5
3,217,414	-		LRK53_RS14690	0.55	-0.9
3,217,414	-		LRK53_RS14690	0.55	+0.1
3,217,414	-		LRK53_RS14690	0.55	-1.0
3,217,414	-		LRK53_RS14690	0.55	+0.0
3,217,414	-		LRK53_RS14690	0.55	-2.2
3,217,414	-		LRK53_RS14690	0.55	-0.7
3,217,414	-		LRK53_RS14690	0.55	+2.2
3,217,414	-		LRK53_RS14690	0.55	-2.1
3,217,414	-		LRK53_RS14690	0.55	-1.5
3,217,414	-		LRK53_RS14690	0.55	-1.4
3,217,414	-		LRK53_RS14690	0.55	+1.0
3,217,414	-		LRK53_RS14690	0.55	-1.7
3,217,414	-		LRK53_RS14690	0.55	-0.8
3,217,414	-		LRK53_RS14690	0.55	-2.5
3,217,414	-		LRK53_RS14690	0.55	+0.6
3,217,414	-		LRK53_RS14690	0.55	+1.6
3,217,414	-		LRK53_RS14690	0.55	-0.7
3,217,414	-		LRK53_RS14690	0.55	-0.7
3,217,414	-		LRK53_RS14690	0.55	-1.7
3,217,414	-		LRK53_RS14690	0.55	-1.3
3,217,434	+		LRK53_RS14690	0.58	-0.4
3,217,434	+		LRK53_RS14690	0.58	-1.9
3,217,434	+		LRK53_RS14690	0.58	+0.4
3,217,434	+		LRK53_RS14690	0.58	-0.6
3,217,434	+		LRK53_RS14690	0.58	-0.9
3,217,434	+		LRK53_RS14690	0.58	-0.6
3,217,434	+		LRK53_RS14690	0.58	-0.6
3,217,435	-		LRK53_RS14690	0.58	-1.7
3,217,435	-		LRK53_RS14690	0.58	-1.6
3,217,435	-		LRK53_RS14690	0.58	-0.2
3,217,435	-		LRK53_RS14690	0.58	-1.6
3,217,435	-		LRK53_RS14690	0.58	+0.2
3,217,435	-		LRK53_RS14690	0.58	-1.8
3,217,435	-		LRK53_RS14690	0.58	+0.0
3,217,497	+		LRK53_RS14690	0.67	-0.4
3,217,497	+		LRK53_RS14690	0.67	-0.8
3,217,497	+		LRK53_RS14690	0.67	-0.9
3,217,497	+		LRK53_RS14690	0.67	+1.0
3,217,497	+		LRK53_RS14690	0.67	+1.0
3,217,497	+		LRK53_RS14690	0.67	-0.5
3,217,498	-		LRK53_RS14690	0.68	-0.2
3,217,498	-		LRK53_RS14690	0.68	-0.2
3,217,498	-		LRK53_RS14690	0.68	-0.7
3,217,498	-		LRK53_RS14690	0.68	-1.0
3,217,498	-		LRK53_RS14690	0.68	-1.0
3,217,498	-		LRK53_RS14690	0.68	-1.1
3,217,498	-		LRK53_RS14690	0.68	+1.0
3,217,515	+		LRK53_RS14690	0.70	-0.4
3,217,515	+		LRK53_RS14690	0.70	+2.3
3,217,515	+		LRK53_RS14690	0.70	-0.9
3,217,515	+		LRK53_RS14690	0.70	-0.4
3,217,515	+		LRK53_RS14690	0.70	-1.3
3,217,515	+		LRK53_RS14690	0.70	-0.6
3,217,515	+		LRK53_RS14690	0.70	+0.6
3,217,515	+		LRK53_RS14690	0.70	-0.8
3,217,515	+		LRK53_RS14690	0.70	-1.4
3,217,516	-		LRK53_RS14690	0.70	+1.5
3,217,516	-		LRK53_RS14690	0.70	-1.3
3,217,516	-		LRK53_RS14690	0.70	-0.9
3,217,516	-		LRK53_RS14690	0.70	+0.3
3,217,516	-		LRK53_RS14690	0.70	-0.4
3,217,516	-		LRK53_RS14690	0.70	+0.3
3,217,516	-		LRK53_RS14690	0.70	-1.0
3,217,516	-		LRK53_RS14690	0.70	-0.6
3,217,516	-		LRK53_RS14690	0.70	-1.9
3,217,516	-		LRK53_RS14690	0.70	-0.1
3,217,516	-		LRK53_RS14690	0.70	-1.3
3,217,916	+		LRK53_RS14695	0.15	-1.1
3,217,916	+		LRK53_RS14695	0.15	-0.2
3,217,916	+		LRK53_RS14695	0.15	+0.0
3,217,916	+		LRK53_RS14695	0.15	-0.9
3,217,916	+		LRK53_RS14695	0.15	-2.8
3,217,916	+		LRK53_RS14695	0.15	-2.2
3,217,916	+		LRK53_RS14695	0.15	-1.4
3,217,916	+		LRK53_RS14695	0.15	+0.0
3,217,916	+		LRK53_RS14695	0.15	-1.0
3,217,916	+		LRK53_RS14695	0.15	-1.5
3,217,916	+		LRK53_RS14695	0.15	-0.6
3,217,917	-		LRK53_RS14695	0.15	-0.7
3,217,917	-		LRK53_RS14695	0.15	-0.1
3,217,917	-		LRK53_RS14695	0.15	-1.1
3,217,917	-		LRK53_RS14695	0.15	+1.0
3,217,917	-		LRK53_RS14695	0.15	-2.3
3,217,917	-		LRK53_RS14695	0.15	+0.0
3,217,917	-		LRK53_RS14695	0.15	-0.4
3,217,917	-		LRK53_RS14695	0.15	-1.3
3,217,917	-		LRK53_RS14695	0.15	-1.1
3,217,917	-		LRK53_RS14695	0.15	-1.0
3,217,917	-		LRK53_RS14695	0.15	-0.2
3,217,917	-		LRK53_RS14695	0.15	-1.1
3,217,917	-		LRK53_RS14695	0.15	-0.5
3,217,917	-		LRK53_RS14695	0.15	-2.7
3,218,069	+		LRK53_RS14695	0.28	+0.0
3,218,069	+		LRK53_RS14695	0.28	-0.7
3,218,069	+		LRK53_RS14695	0.28	+0.0
3,218,069	+		LRK53_RS14695	0.28	+1.1
3,218,070	-		LRK53_RS14695	0.28	-1.3
3,218,070	-		LRK53_RS14695	0.28	-2.1
3,218,070	-		LRK53_RS14695	0.28	-0.9
3,218,070	-		LRK53_RS14695	0.28	-0.5
3,218,070	-		LRK53_RS14695	0.28	-0.5
3,218,070	-		LRK53_RS14695	0.28	+1.1
3,218,070	-		LRK53_RS14695	0.28	+0.1
3,218,171	+		LRK53_RS14695	0.36	-0.4
3,218,222	+		LRK53_RS14695	0.40	-1.5
3,218,222	+		LRK53_RS14695	0.40	+0.6
3,218,222	+		LRK53_RS14695	0.40	-0.6
3,218,222	+		LRK53_RS14695	0.40	-1.3
3,218,222	+		LRK53_RS14695	0.40	-0.9
3,218,222	+		LRK53_RS14695	0.40	-0.6
3,218,222	+		LRK53_RS14695	0.40	-1.6
3,218,222	+		LRK53_RS14695	0.40	-0.7
3,218,223	-		LRK53_RS14695	0.40	-0.4
3,218,223	-		LRK53_RS14695	0.40	-0.8
3,218,223	-		LRK53_RS14695	0.40	-0.8
3,218,223	-		LRK53_RS14695	0.40	+0.1
3,218,223	-		LRK53_RS14695	0.40	+0.1
3,218,223	-		LRK53_RS14695	0.40	-1.9
3,218,223	-		LRK53_RS14695	0.40	-1.0
3,218,223	-		LRK53_RS14695	0.40	-1.9
3,218,223	-		LRK53_RS14695	0.40	-1.5
3,218,285	+		LRK53_RS14695	0.45	+1.0
3,218,285	+		LRK53_RS14695	0.45	-0.3
3,218,286	-		LRK53_RS14695	0.46	-1.3
3,218,318	+		LRK53_RS14695	0.48	+1.0
3,218,318	+		LRK53_RS14695	0.48	-0.6
3,218,318	+		LRK53_RS14695	0.48	+0.1
3,218,318	+		LRK53_RS14695	0.48	-1.3
3,218,318	+		LRK53_RS14695	0.48	+1.3
3,218,318	+		LRK53_RS14695	0.48	+0.3
3,218,318	+		LRK53_RS14695	0.48	-2.1
3,218,318	+		LRK53_RS14695	0.48	-1.5
3,218,318	+		LRK53_RS14695	0.48	-1.1
3,218,318	+		LRK53_RS14695	0.48	+0.0
3,218,318	+		LRK53_RS14695	0.48	-1.7
3,218,318	+		LRK53_RS14695	0.48	+0.3
3,218,318	+		LRK53_RS14695	0.48	-1.0
3,218,319	-		LRK53_RS14695	0.48	-2.1
3,218,319	-		LRK53_RS14695	0.48	-1.5
3,218,319	-		LRK53_RS14695	0.48	-0.9
3,218,319	-		LRK53_RS14695	0.48	-1.2
3,218,319	-		LRK53_RS14695	0.48	-2.1
3,218,319	-		LRK53_RS14695	0.48	-0.4
3,218,319	-		LRK53_RS14695	0.48	-3.2
3,218,319	-		LRK53_RS14695	0.48	-0.6
3,218,480	+		LRK53_RS14695	0.62	-1.1
3,218,480	+		LRK53_RS14695	0.62	-0.1
3,218,480	+		LRK53_RS14695	0.62	-1.6
3,218,480	+		LRK53_RS14695	0.62	-1.4
3,218,480	+		LRK53_RS14695	0.62	-0.4
3,218,480	+		LRK53_RS14695	0.62	-0.3
3,218,480	+		LRK53_RS14695	0.62	+1.4
3,218,480	+		LRK53_RS14695	0.62	-0.8
3,218,480	+		LRK53_RS14695	0.62	-2.7
3,218,480	+		LRK53_RS14695	0.62	-1.5
3,218,480	+		LRK53_RS14695	0.62	-1.1
3,218,481	-		LRK53_RS14695	0.62	-2.3
3,218,481	-		LRK53_RS14695	0.62	-0.9
3,218,481	-		LRK53_RS14695	0.62	-0.3
3,218,481	-		LRK53_RS14695	0.62	-1.5
3,218,481	-		LRK53_RS14695	0.62	-0.2
3,218,481	-		LRK53_RS14695	0.62	-1.6
3,218,481	-		LRK53_RS14695	0.62	+0.4
3,218,481	-		LRK53_RS14695	0.62	+0.0
3,218,481	-		LRK53_RS14695	0.62	-2.0
3,218,481	-		LRK53_RS14695	0.62	-1.5
3,218,481	-		LRK53_RS14695	0.62	-0.3
3,218,517	+		LRK53_RS14695	0.65	-1.4
3,218,518	-		LRK53_RS14695	0.65	-0.2
3,218,555	+		LRK53_RS14695	0.68	+0.7
3,218,555	+		LRK53_RS14695	0.68	+0.6
3,218,555	+		LRK53_RS14695	0.68	+0.3
3,218,555	+		LRK53_RS14695	0.68	-2.0
3,218,555	+		LRK53_RS14695	0.68	-1.1
3,218,555	+		LRK53_RS14695	0.68	-1.7
3,218,555	+		LRK53_RS14695	0.68	+1.3
3,218,555	+		LRK53_RS14695	0.68	-0.5
3,218,555	+		LRK53_RS14695	0.68	+0.1
3,218,555	+		LRK53_RS14695	0.68	-0.2
3,218,555	+		LRK53_RS14695	0.68	-1.0
3,218,555	+		LRK53_RS14695	0.68	-1.5
3,218,555	+		LRK53_RS14695	0.68	-1.5
3,218,555	+		LRK53_RS14695	0.68	-1.1
3,218,555	+		LRK53_RS14695	0.68	-0.9
3,218,555	+		LRK53_RS14695	0.68	-0.7
3,218,555	+		LRK53_RS14695	0.68	-1.8
3,218,555	+		LRK53_RS14695	0.68	-0.2
3,218,555	+		LRK53_RS14695	0.68	-1.6
3,218,555	+		LRK53_RS14695	0.68	-0.6
3,218,555	+		LRK53_RS14695	0.68	-0.9
3,218,556	-		LRK53_RS14695	0.68	+0.3
3,218,556	-		LRK53_RS14695	0.68	-1.7
3,218,556	-		LRK53_RS14695	0.68	-0.2
3,218,556	-		LRK53_RS14695	0.68	+0.3
3,218,556	-		LRK53_RS14695	0.68	-1.6
3,218,556	-		LRK53_RS14695	0.68	+0.1
3,218,556	-		LRK53_RS14695	0.68	-0.4
3,218,556	-		LRK53_RS14695	0.68	-2.3
3,218,556	-		LRK53_RS14695	0.68	+0.7
3,218,556	-		LRK53_RS14695	0.68	-0.2
3,218,556	-		LRK53_RS14695	0.68	-0.7
3,218,556	-		LRK53_RS14695	0.68	-4.1
3,218,556	-		LRK53_RS14695	0.68	+0.3
3,218,556	-		LRK53_RS14695	0.68	-0.4
3,218,556	-		LRK53_RS14695	0.68	-1.9
3,218,556	-		LRK53_RS14695	0.68	-0.7
3,218,556	-		LRK53_RS14695	0.68	-1.3
3,218,556	-		LRK53_RS14695	0.68	-0.4
3,218,556	-		LRK53_RS14695	0.68	-1.1
3,218,556	-		LRK53_RS14695	0.68	-0.9
3,218,556	-		LRK53_RS14695	0.68	-1.0
3,218,556	-		LRK53_RS14695	0.68	+0.8
3,218,556	-		LRK53_RS14695	0.68	-0.6
3,218,556	-		LRK53_RS14695	0.68	-0.4
3,218,556	-		LRK53_RS14695	0.68	+2.0
3,218,556	-		LRK53_RS14695	0.68	-1.5
3,218,556	-		LRK53_RS14695	0.68	-0.5
3,218,556	-		LRK53_RS14695	0.68	-1.5
3,218,556	-		LRK53_RS14695	0.68	-2.1
3,218,556	-		LRK53_RS14695	0.68	-1.6