Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS12925

Experiment: biofilm; Day2; NLDM;

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	biofilm; Day2; NLDM;
2,859,369	+		LRK53_RS12920	0.65	+1.4
2,859,369	+		LRK53_RS12920	0.65	-0.6
2,859,369	+		LRK53_RS12920	0.65	+1.1
2,859,370	-		LRK53_RS12920	0.65	+1.6
2,859,370	-		LRK53_RS12920	0.65	-1.0
2,859,370	-		LRK53_RS12920	0.65	-0.2
2,859,370	-		LRK53_RS12920	0.65	-0.7
2,859,370	-		LRK53_RS12920	0.65	-0.5
2,859,370	-		LRK53_RS12920	0.65	-0.4
2,859,376	-		LRK53_RS12920	0.66	-0.5
2,859,376	-		LRK53_RS12920	0.66	-0.8
2,859,391	-		LRK53_RS12920	0.66	-0.6
2,859,665	-		LRK53_RS12920	0.83	-1.4
2,859,995	-				-1.3
2,859,995	-				-0.1
2,860,068	+				-1.4
2,860,103	+				-1.1
2,860,103	+				-1.7
2,860,103	+				+0.6
2,860,103	+				+0.9
2,860,104	-				-1.3
2,860,104	-				+0.0
2,860,142	+				-0.7
2,860,142	+				+1.2
2,860,142	+				-0.1
2,860,142	+				-0.2
2,860,142	+				+1.5
2,860,143	-				-2.3
2,860,143	-				-1.5
2,860,143	-				-1.1
2,860,275	+		LRK53_RS12925	0.11	+1.1
2,860,275	+		LRK53_RS12925	0.11	-2.9
2,860,276	-		LRK53_RS12925	0.11	-2.1
2,860,276	-		LRK53_RS12925	0.11	+2.2
2,860,276	-		LRK53_RS12925	0.11	-0.8
2,860,427	-		LRK53_RS12925	0.20	-0.1
2,860,515	-		LRK53_RS12925	0.25	-0.6
2,860,515	-		LRK53_RS12925	0.25	-0.7
2,860,651	+		LRK53_RS12925	0.33	-0.7
2,860,652	-		LRK53_RS12925	0.33	-0.2
2,860,652	-		LRK53_RS12925	0.33	-0.8
2,860,672	-		LRK53_RS12925	0.34	-2.0
2,860,672	-		LRK53_RS12925	0.34	-0.1
2,860,672	-		LRK53_RS12925	0.34	+2.1
2,860,673	+		LRK53_RS12925	0.34	-0.7
2,860,673	+		LRK53_RS12925	0.34	+0.5
2,860,673	+		LRK53_RS12925	0.34	-0.3
2,860,673	+		LRK53_RS12925	0.34	-1.0
2,860,673	+		LRK53_RS12925	0.34	-0.7
2,860,673	+		LRK53_RS12925	0.34	-1.6
2,860,673	+		LRK53_RS12925	0.34	-1.5
2,860,674	-		LRK53_RS12925	0.34	-2.4
2,860,674	-		LRK53_RS12925	0.34	-1.0
2,860,674	-		LRK53_RS12925	0.34	-1.0
2,860,674	-		LRK53_RS12925	0.34	-0.7
2,860,674	-		LRK53_RS12925	0.34	-0.0
2,860,674	-		LRK53_RS12925	0.34	+0.1
2,860,674	-		LRK53_RS12925	0.34	-0.7
2,860,722	+		LRK53_RS12925	0.37	-2.5
2,860,723	-		LRK53_RS12925	0.37	-1.5
2,860,723	-		LRK53_RS12925	0.37	-0.8
2,860,774	+		LRK53_RS12925	0.40	-0.2
2,860,774	+		LRK53_RS12925	0.40	+0.3
2,860,774	+		LRK53_RS12925	0.40	-2.4
2,860,774	+		LRK53_RS12925	0.40	-2.2
2,860,775	-		LRK53_RS12925	0.40	-1.9
2,860,775	-		LRK53_RS12925	0.40	-1.6
2,860,796	+		LRK53_RS12925	0.41	+0.7
2,860,850	+		LRK53_RS12925	0.44	-0.5
2,860,850	+		LRK53_RS12925	0.44	-0.1
2,860,850	+		LRK53_RS12925	0.44	-0.5
2,860,851	-		LRK53_RS12925	0.44	-3.2
2,860,851	-		LRK53_RS12925	0.44	-1.3
2,860,851	-		LRK53_RS12925	0.44	-2.3
2,860,851	-		LRK53_RS12925	0.44	+0.3
2,860,851	-		LRK53_RS12925	0.44	+0.2
2,860,851	-		LRK53_RS12925	0.44	-1.5
2,860,851	-		LRK53_RS12925	0.44	-0.8
2,860,907	+		LRK53_RS12925	0.48	-0.7
2,860,907	+		LRK53_RS12925	0.48	-1.6
2,860,908	-		LRK53_RS12925	0.48	-0.8
2,860,943	+		LRK53_RS12925	0.50	+0.7
2,860,943	+		LRK53_RS12925	0.50	-0.8
2,860,943	+		LRK53_RS12925	0.50	+0.5
2,860,944	-		LRK53_RS12925	0.50	-2.3
2,860,944	-		LRK53_RS12925	0.50	-0.4
2,860,944	-		LRK53_RS12925	0.50	-1.6
2,860,944	-		LRK53_RS12925	0.50	-0.2
2,860,945	+		LRK53_RS12925	0.50	-1.8
2,860,945	+		LRK53_RS12925	0.50	-0.6
2,860,946	-		LRK53_RS12925	0.50	-1.3
2,860,990	+		LRK53_RS12925	0.52	+0.0
2,861,093	+		LRK53_RS12925	0.58	+0.2
2,861,188	-		LRK53_RS12925	0.64	+0.6
2,861,188	-		LRK53_RS12925	0.64	-0.3
2,861,279	+		LRK53_RS12925	0.69	+0.2
2,861,279	+		LRK53_RS12925	0.69	-0.7
2,861,279	+		LRK53_RS12925	0.69	-0.3
2,861,280	-		LRK53_RS12925	0.69	+1.0
2,861,282	+		LRK53_RS12925	0.69	-0.9
2,861,282	+		LRK53_RS12925	0.69	+0.1
2,861,283	-		LRK53_RS12925	0.69	+0.3
2,861,283	-		LRK53_RS12925	0.69	-0.6
2,861,283	-		LRK53_RS12925	0.69	-0.1
2,861,283	-		LRK53_RS12925	0.69	-1.5
2,861,339	+		LRK53_RS12925	0.73	-1.5
2,861,357	+		LRK53_RS12925	0.74	+1.1
2,861,357	+		LRK53_RS12925	0.74	-0.8
2,861,376	-		LRK53_RS12925	0.75	-0.8
2,861,376	-		LRK53_RS12925	0.75	+0.4
2,861,376	-		LRK53_RS12925	0.75	-0.5
2,861,376	-		LRK53_RS12925	0.75	-0.6
2,861,404	+		LRK53_RS12925	0.76	-0.4
2,861,404	+		LRK53_RS12925	0.76	-0.6
2,861,404	+		LRK53_RS12925	0.76	-1.3
2,861,404	+		LRK53_RS12925	0.76	+0.1
2,861,404	+		LRK53_RS12925	0.76	-0.7
2,861,405	-		LRK53_RS12925	0.76	-1.4
2,861,405	-		LRK53_RS12925	0.76	-2.3
2,861,405	-		LRK53_RS12925	0.76	+0.5
2,861,503	+		LRK53_RS12925	0.82	-1.4
2,861,503	+		LRK53_RS12925	0.82	+0.6
2,861,503	+		LRK53_RS12925	0.82	+0.4
2,861,503	+		LRK53_RS12925	0.82	-2.3
2,861,504	-		LRK53_RS12925	0.82	-0.2
2,861,504	-		LRK53_RS12925	0.82	-0.7
2,861,504	-		LRK53_RS12925	0.82	-0.7
2,861,504	-		LRK53_RS12925	0.82	-0.7
2,861,504	-		LRK53_RS12925	0.82	+1.4
2,861,624	+		LRK53_RS12925	0.89	-2.3
2,861,624	+		LRK53_RS12925	0.89	-0.3
2,861,625	-		LRK53_RS12925	0.89	-0.9
2,861,625	-		LRK53_RS12925	0.89	-2.0
2,861,709	+				+0.1
2,861,818	+				-1.1
2,861,819	-				-2.5
2,861,828	-				-1.3
2,861,904	+				-0.5
2,861,905	-				-0.3
2,861,906	+				-1.2
2,861,906	+				-1.3
2,861,906	+				-0.4
2,861,907	-				+0.4
2,861,907	-				-0.8
2,861,998	+		LRK53_RS12930	0.28	-0.3
2,861,998	+		LRK53_RS12930	0.28	-0.6
2,861,998	+		LRK53_RS12930	0.28	+0.9
2,862,034	+		LRK53_RS12930	0.39	+1.5
2,862,034	+		LRK53_RS12930	0.39	-1.5
2,862,034	+		LRK53_RS12930	0.39	-1.3
2,862,034	+		LRK53_RS12930	0.39	-1.9
2,862,034	+		LRK53_RS12930	0.39	-0.4
2,862,035	-		LRK53_RS12930	0.40	+0.3
2,862,035	-		LRK53_RS12930	0.40	-0.7
2,862,035	-		LRK53_RS12930	0.40	-1.0
2,862,036	+		LRK53_RS12930	0.40	-0.5
2,862,036	+		LRK53_RS12930	0.40	-0.8
2,862,037	-		LRK53_RS12930	0.40	+0.5
2,862,037	-		LRK53_RS12930	0.40	+1.9
2,862,037	-		LRK53_RS12930	0.40	-1.4
2,862,252	+				+0.9
2,862,252	+				-0.1
2,862,354	+				+1.1
2,862,354	+				-4.0
2,862,354	+				-0.8
2,862,354	+				+1.5
2,862,354	+				+0.5
2,862,354	+				-0.5
2,862,354	+				+1.1
2,862,354	+				-1.2
2,862,355	-				-1.1
2,862,355	-				-0.3
2,862,355	-				-1.5
2,862,355	-				-0.5
2,862,355	-				+0.3
2,862,395	+				-1.7
2,862,395	+				-1.2
2,862,395	+				-0.6
2,862,396	-				-0.8
2,862,442	+				-0.5
2,862,442	+				-0.0
2,862,442	+				-1.0
2,862,442	+				+0.1
2,862,442	+				-1.0
2,862,442	+				-0.5
2,862,442	+				-2.0
2,862,442	+				-2.1
2,862,442	+				-1.3
2,862,442	+				-1.2
2,862,442	+				-0.7
2,862,442	+				+0.3
2,862,442	+				-2.1
2,862,442	+				-1.2
2,862,442	+				-0.3
2,862,442	+				-0.3
2,862,443	-				-1.4
2,862,443	-				+0.5
2,862,443	-				-0.7
2,862,443	-				-0.8
2,862,443	-				+1.3
2,862,443	-				-1.1
2,862,443	-				+0.3
2,862,443	-				+0.2
2,862,443	-				-2.2
2,862,541	+				+0.2
2,862,541	+				+0.3
2,862,541	+				-0.4
2,862,541	+				+0.3
2,862,541	+				-1.0
2,862,542	-				-1.4
2,862,542	-				+0.3
2,862,542	-				-0.8
2,862,542	-				-2.2
2,862,542	-				-0.1
2,862,542	-				+1.1