Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS12190

Experiment: biofilm; Day2; NLDM;

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	biofilm; Day2; NLDM;
2,711,601	+		LRK53_RS12180	0.89	-1.2
2,711,601	+		LRK53_RS12180	0.89	-0.5
2,711,601	+		LRK53_RS12180	0.89	-1.3
2,711,601	+		LRK53_RS12180	0.89	-0.1
2,711,601	+		LRK53_RS12180	0.89	+0.5
2,711,601	+		LRK53_RS12180	0.89	-1.5
2,711,601	+		LRK53_RS12180	0.89	+2.3
2,711,601	+		LRK53_RS12180	0.89	+0.6
2,711,601	+		LRK53_RS12180	0.89	-0.2
2,711,601	+		LRK53_RS12180	0.89	+0.7
2,711,602	-		LRK53_RS12180	0.89	-1.3
2,711,602	-		LRK53_RS12180	0.89	-1.2
2,711,602	-		LRK53_RS12180	0.89	+1.1
2,711,602	-		LRK53_RS12180	0.89	-1.3
2,711,602	-		LRK53_RS12180	0.89	+0.1
2,711,602	-		LRK53_RS12180	0.89	+1.2
2,711,622	+				-1.3
2,711,622	+				-0.7
2,711,622	+				-1.3
2,711,623	-				-1.5
2,711,702	-				-1.8
2,711,702	-				+1.6
2,711,705	+				-1.0
2,711,705	+				+2.2
2,711,705	+				-0.8
2,711,705	+				+0.3
2,711,705	+				+0.6
2,711,705	+				-1.1
2,711,705	+				-0.1
2,711,705	+				+1.2
2,711,705	+				-0.3
2,711,705	+				+0.9
2,711,705	+				-1.3
2,711,705	+				+0.7
2,711,705	+				-1.1
2,711,705	+				-1.7
2,711,705	+				+0.5
2,711,705	+				-1.2
2,711,705	+				-1.7
2,711,706	-				-1.6
2,711,706	-				+0.1
2,711,706	-				+1.5
2,711,706	-				+1.2
2,711,706	-				-0.8
2,711,706	-				-0.2
2,711,706	-				-1.9
2,711,706	-				-2.2
2,711,706	-				-0.0
2,711,706	-				-0.1
2,711,706	-				+0.0
2,711,706	-				+0.5
2,711,706	-				-0.6
2,711,706	-				+2.5
2,711,706	-				+3.0
2,711,706	-				-0.7
2,711,706	-				-1.3
2,711,706	-				-0.1
2,711,706	-				-0.8
2,711,706	-				-0.3
2,711,751	+				-0.8
2,711,751	+				-1.0
2,711,752	-				-0.0
2,711,797	+				-0.9
2,711,797	+				+0.2
2,711,797	+				+0.1
2,711,797	+				+0.2
2,711,797	+				+0.9
2,711,797	+				-0.2
2,711,797	+				+1.0
2,711,797	+				+0.0
2,711,797	+				-0.6
2,711,797	+				-0.1
2,711,797	+				-0.8
2,711,797	+				+0.3
2,711,797	+				-1.1
2,711,797	+				-1.4
2,711,797	+				-0.3
2,711,797	+				+1.4
2,711,797	+				-0.7
2,711,797	+				-2.7
2,711,797	+				+1.8
2,711,797	+				-0.9
2,711,797	+				-1.5
2,711,797	+				-1.6
2,711,797	+				-1.0
2,711,798	-				+0.0
2,711,798	-				+0.3
2,711,798	-				-0.1
2,711,798	-				-0.3
2,711,798	-				-1.7
2,711,798	-				-1.0
2,711,798	-				-1.3
2,711,798	-				-0.3
2,711,798	-				-2.1
2,711,798	-				-0.7
2,711,798	-				-1.0
2,711,798	-				-0.1
2,711,798	-				-1.2
2,711,798	-				-0.0
2,711,798	-				-0.4
2,711,799	+				+0.5
2,711,799	+				-1.6
2,711,799	+				+0.1
2,711,799	+				+0.1
2,711,799	+				+0.1
2,711,799	+				-2.8
2,711,799	+				-1.0
2,711,799	+				-0.8
2,711,799	+				+0.8
2,711,799	+				+0.7
2,711,800	-				-2.0
2,711,800	-				+1.0
2,711,800	-				-0.3
2,711,800	-				+0.5
2,711,800	-				-0.8
2,711,800	-				-1.3
2,711,800	-				+0.3
2,711,800	-				-1.2
2,711,800	-				-3.4
2,711,800	-				-0.5
2,711,800	-				-1.1
2,711,804	+				+0.2
2,711,805	-				-1.3
2,711,805	-				-2.0
2,711,813	-				+0.8
2,711,837	+				-0.2
2,711,838	-				-1.0
2,711,838	-				+0.4
2,712,096	+				+0.9
2,712,096	+				+0.2
2,712,096	+				-0.1
2,712,097	-				-0.1
2,712,097	-				-1.5
2,712,097	-				+0.4
2,712,097	-				-0.3
2,712,097	-				-1.3
2,712,117	+				+1.2
2,712,117	+				-0.2
2,712,117	+				+1.4
2,712,118	-				-0.9
2,712,118	-				-0.7
2,712,136	+				-0.5
2,712,136	+				-1.5
2,712,137	-				-2.8
2,712,137	-				-1.5
2,712,137	-				-1.7
2,712,194	+				+0.2
2,712,194	+				-1.8
2,712,194	+				+0.1
2,712,195	-				-1.1
2,712,195	-				-1.8
2,712,195	-				-1.8
2,712,207	-				-1.8
2,712,259	-				-1.2
2,712,286	+				-0.7
2,712,286	+				-0.8
2,712,286	+				-1.7
2,712,286	+				-0.7
2,712,286	+				-0.8
2,712,286	+				+1.8
2,712,286	+				-1.6
2,712,286	+				-1.2
2,712,286	+				-0.6
2,712,286	+				-0.5
2,712,286	+				+0.2
2,712,287	-				+0.2
2,712,287	-				+0.6
2,712,287	-				+0.3
2,712,287	-				-0.3
2,712,287	-				-1.9
2,712,287	-				-2.1
2,712,287	-				-0.3
2,712,287	-				-0.4
2,712,287	-				-1.7
2,712,287	-				-0.4
2,712,287	-				-0.6
2,712,287	-				+0.9
2,712,287	-				+0.6
2,712,287	-				+0.2
2,712,287	-				-0.8
2,712,287	-				-0.1
2,712,287	-				-1.5
2,712,288	+				-0.7
2,712,288	+				-0.5
2,712,288	+				-1.1
2,712,288	+				+0.2
2,712,288	+				-0.8
2,712,288	+				-0.0
2,712,288	+				-1.4
2,712,289	-				-1.3
2,712,289	-				+0.7
2,712,289	-				-1.6
2,712,289	-				-0.1
2,712,409	+				+0.3
2,712,428	-				+1.1
2,712,428	-				+1.4
2,712,428	-				-1.0
2,712,452	-				-2.3
2,712,475	+				+0.7
2,712,476	-				+1.7
2,712,484	+				-1.8
2,712,484	+				-1.9
2,712,484	+				-1.3
2,712,485	-				-1.4
2,712,514	+				-0.5
2,712,514	+				-1.4
2,712,525	+				-1.4
2,712,526	-				-1.3
2,712,527	+				+0.4
2,712,527	+				+0.7
2,712,528	-				-0.3
2,712,528	-				-0.9
2,712,528	-				-0.5
2,712,558	+				-0.2
2,712,607	-				-0.5
2,712,644	+				-1.2
2,712,644	+				-1.3
2,712,645	-				-2.7
2,712,689	+		LRK53_RS12190	0.13	-2.4
2,712,689	+		LRK53_RS12190	0.13	-1.1
2,712,690	-		LRK53_RS12190	0.13	-1.3
2,712,690	-		LRK53_RS12190	0.13	-0.7
2,712,701	+		LRK53_RS12190	0.15	+0.4
2,712,701	+		LRK53_RS12190	0.15	-0.6
2,712,701	+		LRK53_RS12190	0.15	-1.5
2,712,702	-		LRK53_RS12190	0.15	-1.3
2,712,702	-		LRK53_RS12190	0.15	+1.8
2,712,796	+		LRK53_RS12190	0.28	-1.3
2,712,796	+		LRK53_RS12190	0.28	+0.5
2,712,796	+		LRK53_RS12190	0.28	-0.6
2,712,797	-		LRK53_RS12190	0.28	-1.1
2,712,859	+		LRK53_RS12190	0.37	-0.3
2,712,859	+		LRK53_RS12190	0.37	+0.3
2,712,859	+		LRK53_RS12190	0.37	-1.7
2,712,859	+		LRK53_RS12190	0.37	-2.3
2,712,859	+		LRK53_RS12190	0.37	-1.2
2,712,859	+		LRK53_RS12190	0.37	-1.4
2,712,859	+		LRK53_RS12190	0.37	-0.3
2,712,860	-		LRK53_RS12190	0.37	-1.2
2,712,860	-		LRK53_RS12190	0.37	-0.1
2,712,984	-		LRK53_RS12190	0.54	-1.9
2,713,074	+		LRK53_RS12190	0.66	-1.7
2,713,074	+		LRK53_RS12190	0.66	+0.1
2,713,074	+		LRK53_RS12190	0.66	+0.0
2,713,074	+		LRK53_RS12190	0.66	+0.2
2,713,074	+		LRK53_RS12190	0.66	-2.2
2,713,075	-		LRK53_RS12190	0.66	-0.5
2,713,075	-		LRK53_RS12190	0.66	-1.1
2,713,075	-		LRK53_RS12190	0.66	-1.2
2,713,078	+		LRK53_RS12190	0.67	-1.3
2,713,079	-		LRK53_RS12190	0.67	-0.2
2,713,079	-		LRK53_RS12190	0.67	+1.9
2,713,107	+		LRK53_RS12190	0.71	-0.9
2,713,108	-		LRK53_RS12190	0.71	-1.2
2,713,114	+		LRK53_RS12190	0.72	-0.9
2,713,114	+		LRK53_RS12190	0.72	-0.9
2,713,151	-		LRK53_RS12190	0.77	-0.2
2,713,153	+		LRK53_RS12190	0.77	+0.1
2,713,153	+		LRK53_RS12190	0.77	-1.1
2,713,154	-		LRK53_RS12190	0.77	+0.1
2,713,154	-		LRK53_RS12190	0.77	-1.2
2,713,192	+		LRK53_RS12190	0.83	-0.7
2,713,192	+		LRK53_RS12190	0.83	-1.0
2,713,193	-		LRK53_RS12190	0.83	-1.7
2,713,201	+		LRK53_RS12190	0.84	-1.5
2,713,202	-		LRK53_RS12190	0.84	-1.8
2,713,316	-				-0.9
2,713,381	-				-0.5
2,713,389	-				-1.7
2,713,392	+				-0.8
2,713,395	+				-1.3
2,713,395	+				-0.4
2,713,415	-				-2.2
2,713,439	+				-0.7
2,713,439	+				-2.1
2,713,439	+				-2.1
2,713,440	-				+0.2
2,713,440	-				-0.4
2,713,527	-		LRK53_RS12195	0.12	-1.4
2,713,539	+		LRK53_RS12195	0.13	-1.8
2,713,581	+		LRK53_RS12195	0.16	-2.2
2,713,581	+		LRK53_RS12195	0.16	-1.1
2,713,582	-		LRK53_RS12195	0.17	+0.3
2,713,607	+		LRK53_RS12195	0.19	+0.6
2,713,663	+		LRK53_RS12195	0.24	+1.3
2,713,663	+		LRK53_RS12195	0.24	-1.0
2,713,663	+		LRK53_RS12195	0.24	-2.6
2,713,663	+		LRK53_RS12195	0.24	+1.3
2,713,663	+		LRK53_RS12195	0.24	-0.5
2,713,664	-		LRK53_RS12195	0.24	-1.4
2,713,664	-		LRK53_RS12195	0.24	-0.9
2,713,741	+		LRK53_RS12195	0.31	+0.5
2,713,741	+		LRK53_RS12195	0.31	+1.2
2,713,742	-		LRK53_RS12195	0.31	-0.6
2,713,853	+		LRK53_RS12195	0.40	+0.5
2,713,854	-		LRK53_RS12195	0.41	-1.3
2,713,911	+		LRK53_RS12195	0.46	-0.7
2,713,911	+		LRK53_RS12195	0.46	-2.2
2,713,912	-		LRK53_RS12195	0.46	-2.9
2,713,912	-		LRK53_RS12195	0.46	-2.9
2,713,946	+		LRK53_RS12195	0.49	-0.5
2,713,958	+		LRK53_RS12195	0.50	-0.1
2,713,958	+		LRK53_RS12195	0.50	+1.8
2,713,958	+		LRK53_RS12195	0.50	-0.9
2,713,959	-		LRK53_RS12195	0.50	-0.7
2,713,959	-		LRK53_RS12195	0.50	-0.0
2,713,959	-		LRK53_RS12195	0.50	-0.7
2,713,959	-		LRK53_RS12195	0.50	-0.8
2,713,959	-		LRK53_RS12195	0.50	-0.8
2,714,010	-		LRK53_RS12195	0.54	-0.5
2,714,047	+		LRK53_RS12195	0.58	-0.8
2,714,047	+		LRK53_RS12195	0.58	-0.6
2,714,047	+		LRK53_RS12195	0.58	-0.5
2,714,047	+		LRK53_RS12195	0.58	+0.8
2,714,048	-		LRK53_RS12195	0.58	-0.4
2,714,088	-		LRK53_RS12195	0.61	-0.4
2,714,088	-		LRK53_RS12195	0.61	-1.3
2,714,088	-		LRK53_RS12195	0.61	-0.5
2,714,154	+		LRK53_RS12195	0.67	-0.0
2,714,154	+		LRK53_RS12195	0.67	-0.3
2,714,155	-		LRK53_RS12195	0.67	+0.5
2,714,155	-		LRK53_RS12195	0.67	-2.5
2,714,155	-		LRK53_RS12195	0.67	+1.3
2,714,155	-		LRK53_RS12195	0.67	-0.1
2,714,240	+		LRK53_RS12195	0.75	-0.9
2,714,240	+		LRK53_RS12195	0.75	+0.6
2,714,240	+		LRK53_RS12195	0.75	-0.7
2,714,240	+		LRK53_RS12195	0.75	-0.3
2,714,240	+		LRK53_RS12195	0.75	-1.7
2,714,240	+		LRK53_RS12195	0.75	-0.6
2,714,241	-		LRK53_RS12195	0.75	+1.1
2,714,241	-		LRK53_RS12195	0.75	-0.7
2,714,241	-		LRK53_RS12195	0.75	-2.2
2,714,241	-		LRK53_RS12195	0.75	-0.2
2,714,241	-		LRK53_RS12195	0.75	-1.9