Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS12170

Experiment: biofilm; Day2; NLDM;

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	biofilm; Day2; NLDM;
2,708,123	+		LRK53_RS12165	0.20	+0.5
2,708,198	+		LRK53_RS12165	0.26	+0.4
2,708,198	+		LRK53_RS12165	0.26	-2.1
2,708,198	+		LRK53_RS12165	0.26	+0.7
2,708,198	+		LRK53_RS12165	0.26	-0.9
2,708,198	+		LRK53_RS12165	0.26	-0.7
2,708,199	-		LRK53_RS12165	0.27	-2.5
2,708,199	-		LRK53_RS12165	0.27	-1.5
2,708,199	-		LRK53_RS12165	0.27	+0.0
2,708,199	-		LRK53_RS12165	0.27	-0.4
2,708,199	-		LRK53_RS12165	0.27	+0.6
2,708,199	-		LRK53_RS12165	0.27	-1.8
2,708,217	-		LRK53_RS12165	0.28	-1.3
2,708,345	+		LRK53_RS12165	0.40	-1.8
2,708,345	+		LRK53_RS12165	0.40	-1.1
2,708,345	+		LRK53_RS12165	0.40	-1.0
2,708,345	+		LRK53_RS12165	0.40	+1.6
2,708,345	+		LRK53_RS12165	0.40	-1.7
2,708,345	+		LRK53_RS12165	0.40	-1.2
2,708,345	+		LRK53_RS12165	0.40	+1.1
2,708,345	+		LRK53_RS12165	0.40	+0.8
2,708,345	+		LRK53_RS12165	0.40	-0.5
2,708,345	+		LRK53_RS12165	0.40	+0.4
2,708,346	-		LRK53_RS12165	0.40	+0.6
2,708,346	-		LRK53_RS12165	0.40	-0.5
2,708,346	-		LRK53_RS12165	0.40	-1.9
2,708,346	-		LRK53_RS12165	0.40	-0.8
2,708,346	-		LRK53_RS12165	0.40	-0.8
2,708,346	-		LRK53_RS12165	0.40	-1.2
2,708,346	-		LRK53_RS12165	0.40	+1.3
2,708,346	-		LRK53_RS12165	0.40	-0.4
2,708,346	-		LRK53_RS12165	0.40	-1.4
2,708,392	+		LRK53_RS12165	0.44	+2.2
2,708,392	+		LRK53_RS12165	0.44	-1.0
2,708,393	-		LRK53_RS12165	0.44	-1.1
2,708,393	-		LRK53_RS12165	0.44	+0.3
2,708,771	+		LRK53_RS12165	0.78	-1.0
2,708,771	+		LRK53_RS12165	0.78	-1.2
2,708,772	-		LRK53_RS12165	0.78	-1.1
2,708,782	+		LRK53_RS12165	0.79	+1.0
2,708,783	-		LRK53_RS12165	0.79	-2.3
2,708,783	-		LRK53_RS12165	0.79	+2.0
2,708,783	-		LRK53_RS12165	0.79	-0.2
2,708,783	-		LRK53_RS12165	0.79	-0.1
2,708,783	-		LRK53_RS12165	0.79	-1.0
2,709,010	+				-2.1
2,709,010	+				-0.8
2,709,010	+				-0.9
2,709,011	-				-1.6
2,709,152	+		LRK53_RS12170	0.14	+0.6
2,709,152	+		LRK53_RS12170	0.14	-1.2
2,709,152	+		LRK53_RS12170	0.14	+0.7
2,709,152	+		LRK53_RS12170	0.14	-1.8
2,709,152	+		LRK53_RS12170	0.14	+0.3
2,709,152	+		LRK53_RS12170	0.14	-2.8
2,709,152	+		LRK53_RS12170	0.14	+0.8
2,709,152	+		LRK53_RS12170	0.14	+1.9
2,709,152	+		LRK53_RS12170	0.14	+0.5
2,709,152	+		LRK53_RS12170	0.14	-0.2
2,709,152	+		LRK53_RS12170	0.14	-1.0
2,709,153	-		LRK53_RS12170	0.14	-2.3
2,709,153	-		LRK53_RS12170	0.14	-0.0
2,709,153	-		LRK53_RS12170	0.14	-0.3
2,709,153	-		LRK53_RS12170	0.14	-1.2
2,709,158	+		LRK53_RS12170	0.15	-2.0
2,709,158	+		LRK53_RS12170	0.15	-0.9
2,709,158	+		LRK53_RS12170	0.15	-0.9
2,709,158	+		LRK53_RS12170	0.15	-0.9
2,709,158	+		LRK53_RS12170	0.15	-0.2
2,709,158	+		LRK53_RS12170	0.15	-2.8
2,709,159	-		LRK53_RS12170	0.15	-0.2
2,709,159	-		LRK53_RS12170	0.15	+0.9
2,709,159	-		LRK53_RS12170	0.15	-0.3
2,709,159	-		LRK53_RS12170	0.15	+1.5
2,709,159	-		LRK53_RS12170	0.15	-0.1
2,709,159	-		LRK53_RS12170	0.15	+2.5
2,709,159	-		LRK53_RS12170	0.15	-0.6
2,709,159	-		LRK53_RS12170	0.15	+0.4
2,709,159	-		LRK53_RS12170	0.15	-0.8
2,709,167	+		LRK53_RS12170	0.16	-0.8
2,709,168	-		LRK53_RS12170	0.16	+0.4
2,709,168	-		LRK53_RS12170	0.16	-1.2
2,709,168	-		LRK53_RS12170	0.16	-0.5
2,709,213	+		LRK53_RS12170	0.21	-1.0
2,709,214	-		LRK53_RS12170	0.22	+1.0
2,709,214	-		LRK53_RS12170	0.22	-0.9
2,709,274	+		LRK53_RS12170	0.28	+0.6
2,709,274	+		LRK53_RS12170	0.28	+0.1
2,709,274	+		LRK53_RS12170	0.28	-1.1
2,709,274	+		LRK53_RS12170	0.28	-0.7
2,709,274	+		LRK53_RS12170	0.28	-0.7
2,709,274	+		LRK53_RS12170	0.28	+0.5
2,709,274	+		LRK53_RS12170	0.28	-1.0
2,709,274	+		LRK53_RS12170	0.28	-0.8
2,709,275	-		LRK53_RS12170	0.29	+2.2
2,709,275	-		LRK53_RS12170	0.29	-0.0
2,709,275	-		LRK53_RS12170	0.29	-2.3
2,709,275	-		LRK53_RS12170	0.29	-3.7
2,709,281	+		LRK53_RS12170	0.29	+1.9
2,709,282	-		LRK53_RS12170	0.29	-0.8
2,709,319	+		LRK53_RS12170	0.34	+0.0
2,709,319	+		LRK53_RS12170	0.34	-0.3
2,709,320	-		LRK53_RS12170	0.34	+0.9
2,709,320	-		LRK53_RS12170	0.34	+0.1
2,709,346	+		LRK53_RS12170	0.37	+0.8
2,709,346	+		LRK53_RS12170	0.37	+0.9
2,709,346	+		LRK53_RS12170	0.37	-2.4
2,709,346	+		LRK53_RS12170	0.37	-0.8
2,709,346	+		LRK53_RS12170	0.37	-0.7
2,709,346	+		LRK53_RS12170	0.37	+0.3
2,709,346	+		LRK53_RS12170	0.37	+0.3
2,709,346	+		LRK53_RS12170	0.37	-1.1
2,709,346	+		LRK53_RS12170	0.37	-0.3
2,709,346	+		LRK53_RS12170	0.37	-0.7
2,709,346	+		LRK53_RS12170	0.37	-0.6
2,709,346	+		LRK53_RS12170	0.37	+1.1
2,709,347	-		LRK53_RS12170	0.37	-0.1
2,709,347	-		LRK53_RS12170	0.37	-1.1
2,709,347	-		LRK53_RS12170	0.37	-0.8
2,709,347	-		LRK53_RS12170	0.37	-0.3
2,709,347	-		LRK53_RS12170	0.37	-2.1
2,709,533	+		LRK53_RS12170	0.58	-1.0
2,709,533	+		LRK53_RS12170	0.58	+0.5
2,709,533	+		LRK53_RS12170	0.58	-0.3
2,709,533	+		LRK53_RS12170	0.58	-0.3
2,709,533	+		LRK53_RS12170	0.58	+0.2
2,709,533	+		LRK53_RS12170	0.58	-0.4
2,709,533	+		LRK53_RS12170	0.58	-1.3
2,709,533	+		LRK53_RS12170	0.58	+0.3
2,709,533	+		LRK53_RS12170	0.58	-2.1
2,709,533	+		LRK53_RS12170	0.58	+0.0
2,709,533	+		LRK53_RS12170	0.58	-0.6
2,709,533	+		LRK53_RS12170	0.58	-1.6
2,709,533	+		LRK53_RS12170	0.58	-0.1
2,709,533	+		LRK53_RS12170	0.58	-0.8
2,709,533	+		LRK53_RS12170	0.58	-0.7
2,709,533	+		LRK53_RS12170	0.58	+0.4
2,709,533	+		LRK53_RS12170	0.58	+0.7
2,709,533	+		LRK53_RS12170	0.58	-1.6
2,709,533	+		LRK53_RS12170	0.58	-0.2
2,709,533	+		LRK53_RS12170	0.58	-0.6
2,709,533	+		LRK53_RS12170	0.58	+1.2
2,709,533	+		LRK53_RS12170	0.58	-0.5
2,709,533	+		LRK53_RS12170	0.58	+0.2
2,709,533	+		LRK53_RS12170	0.58	-1.4
2,709,533	+		LRK53_RS12170	0.58	-0.5
2,709,533	+		LRK53_RS12170	0.58	-0.1
2,709,533	+		LRK53_RS12170	0.58	-2.1
2,709,533	+		LRK53_RS12170	0.58	-0.8
2,709,533	+		LRK53_RS12170	0.58	+1.5
2,709,533	+		LRK53_RS12170	0.58	+0.2
2,709,533	+		LRK53_RS12170	0.58	-3.3
2,709,533	+		LRK53_RS12170	0.58	+0.1
2,709,533	+		LRK53_RS12170	0.58	-1.0
2,709,533	+		LRK53_RS12170	0.58	-0.3
2,709,534	-		LRK53_RS12170	0.59	+2.0
2,709,534	-		LRK53_RS12170	0.59	+1.6
2,709,534	-		LRK53_RS12170	0.59	-1.0
2,709,534	-		LRK53_RS12170	0.59	-0.5
2,709,534	-		LRK53_RS12170	0.59	-2.1
2,709,534	-		LRK53_RS12170	0.59	-1.7
2,709,534	-		LRK53_RS12170	0.59	-0.4
2,709,534	-		LRK53_RS12170	0.59	-0.8
2,709,534	-		LRK53_RS12170	0.59	+0.9
2,709,534	-		LRK53_RS12170	0.59	-1.6
2,709,534	-		LRK53_RS12170	0.59	+2.3
2,709,534	-		LRK53_RS12170	0.59	+0.7
2,709,534	-		LRK53_RS12170	0.59	-0.1
2,709,534	-		LRK53_RS12170	0.59	+0.1
2,709,534	-		LRK53_RS12170	0.59	-1.7
2,709,534	-		LRK53_RS12170	0.59	+0.8
2,709,534	-		LRK53_RS12170	0.59	-0.9
2,709,534	-		LRK53_RS12170	0.59	-1.2
2,709,534	-		LRK53_RS12170	0.59	-0.8
2,709,534	-		LRK53_RS12170	0.59	+0.7
2,709,534	-		LRK53_RS12170	0.59	-0.1
2,709,737	+		LRK53_RS12170	0.82	-1.3
2,709,737	+		LRK53_RS12170	0.82	-0.8
2,709,737	+		LRK53_RS12170	0.82	+0.2
2,709,793	+		LRK53_RS12170	0.89	-0.3
2,709,793	+		LRK53_RS12170	0.89	-0.7
2,709,793	+		LRK53_RS12170	0.89	-1.7
2,709,794	-		LRK53_RS12170	0.89	-0.9
2,709,794	-		LRK53_RS12170	0.89	-1.5
2,709,794	-		LRK53_RS12170	0.89	-0.2
2,709,811	+				-1.7
2,709,811	+				-0.7
2,709,811	+				-2.3
2,709,811	+				+0.8
2,709,812	-				-2.6
2,709,812	-				+0.3
2,709,812	-				-1.7
2,709,828	+				-0.1
2,709,828	+				+1.4
2,709,828	+				-0.1
2,709,828	+				-2.2
2,709,828	+				-1.1
2,709,828	+				-1.5
2,709,828	+				-1.1
2,709,828	+				-1.1
2,709,829	-				-0.9
2,709,829	-				-0.5
2,709,829	-				-0.6
2,709,829	-				-1.1
2,709,829	-				-1.0
2,709,829	-				+0.9
2,709,829	-				-0.0
2,709,829	-				+0.9
2,709,829	-				-0.7
2,709,829	-				-1.1
2,709,829	-				+0.9
2,709,829	-				-1.4
2,709,829	-				+0.8
2,709,873	+				-1.5
2,709,873	+				-0.1
2,709,873	+				-1.2
2,709,873	+				+0.6
2,709,873	+				-0.7
2,709,874	-				+0.2
2,709,874	-				+0.8
2,709,930	+				-1.2
2,710,000	+		LRK53_RS12175	0.13	-0.8
2,710,039	-		LRK53_RS12175	0.18	-0.2
2,710,055	+		LRK53_RS12175	0.20	-0.8
2,710,055	+		LRK53_RS12175	0.20	-1.1
2,710,055	+		LRK53_RS12175	0.20	-0.7
2,710,056	-		LRK53_RS12175	0.20	-1.7
2,710,056	-		LRK53_RS12175	0.20	+0.1
2,710,056	-		LRK53_RS12175	0.20	+0.7
2,710,090	+		LRK53_RS12175	0.24	-0.4
2,710,091	-		LRK53_RS12175	0.24	-0.7
2,710,143	+		LRK53_RS12175	0.31	-1.0
2,710,143	+		LRK53_RS12175	0.31	-1.4
2,710,144	-		LRK53_RS12175	0.31	-1.1
2,710,144	-		LRK53_RS12175	0.31	-2.1
2,710,296	+		LRK53_RS12175	0.49	-0.3
2,710,296	+		LRK53_RS12175	0.49	+2.6
2,710,296	+		LRK53_RS12175	0.49	-0.7
2,710,296	+		LRK53_RS12175	0.49	-0.8
2,710,296	+		LRK53_RS12175	0.49	-0.8
2,710,297	-		LRK53_RS12175	0.49	-1.2
2,710,297	-		LRK53_RS12175	0.49	-1.4
2,710,297	-		LRK53_RS12175	0.49	-1.7
2,710,297	-		LRK53_RS12175	0.49	-2.0
2,710,297	-		LRK53_RS12175	0.49	+0.8
2,710,297	-		LRK53_RS12175	0.49	+0.5
2,710,312	+		LRK53_RS12175	0.51	-0.1
2,710,312	+		LRK53_RS12175	0.51	-2.9
2,710,312	+		LRK53_RS12175	0.51	-0.7
2,710,312	+		LRK53_RS12175	0.51	-1.6
2,710,313	-		LRK53_RS12175	0.51	+0.2
2,710,369	+		LRK53_RS12175	0.58	+1.2
2,710,369	+		LRK53_RS12175	0.58	+0.2
2,710,369	+		LRK53_RS12175	0.58	+0.7
2,710,370	-		LRK53_RS12175	0.58	+0.9
2,710,617	+		LRK53_RS12175	0.88	+0.2
2,710,617	+		LRK53_RS12175	0.88	-0.3
2,710,618	-		LRK53_RS12175	0.88	+0.5
2,710,657	+				-0.6
2,710,658	-				-1.1
2,710,658	-				-1.1
2,710,658	-				-2.3
2,710,817	+		LRK53_RS12180	0.10	+1.1
2,710,817	+		LRK53_RS12180	0.10	+0.2
2,710,817	+		LRK53_RS12180	0.10	+1.5
2,710,817	+		LRK53_RS12180	0.10	-0.5
2,710,818	-		LRK53_RS12180	0.10	-0.8
2,710,818	-		LRK53_RS12180	0.10	-2.1
2,710,818	-		LRK53_RS12180	0.10	-1.4
2,710,818	-		LRK53_RS12180	0.10	-0.9
2,710,818	-		LRK53_RS12180	0.10	-0.6
2,710,839	+		LRK53_RS12180	0.12	-1.3
2,710,839	+		LRK53_RS12180	0.12	-0.6
2,710,839	+		LRK53_RS12180	0.12	+0.7
2,710,839	+		LRK53_RS12180	0.12	-0.5
2,710,840	-		LRK53_RS12180	0.13	-0.3
2,710,840	-		LRK53_RS12180	0.13	-0.4
2,710,840	-		LRK53_RS12180	0.13	-0.8
2,710,840	-		LRK53_RS12180	0.13	-1.9
2,710,840	-		LRK53_RS12180	0.13	-1.3
2,710,872	+		LRK53_RS12180	0.16	-1.1
2,710,872	+		LRK53_RS12180	0.16	-0.5
2,710,872	+		LRK53_RS12180	0.16	+0.9
2,710,873	-		LRK53_RS12180	0.16	-0.1
2,710,873	-		LRK53_RS12180	0.16	-2.1