Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS11340

Experiment: biofilm; Day2; NLDM;

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	biofilm; Day2; NLDM;
2,525,704	-		LRK53_RS11330	0.24	-0.3
2,525,704	-		LRK53_RS11330	0.24	-1.8
2,525,733	+		LRK53_RS11330	0.28	-1.4
2,525,733	+		LRK53_RS11330	0.28	-1.0
2,525,733	+		LRK53_RS11330	0.28	+0.7
2,525,733	+		LRK53_RS11330	0.28	-1.7
2,525,734	-		LRK53_RS11330	0.28	-0.2
2,525,735	+		LRK53_RS11330	0.28	-2.3
2,525,736	-		LRK53_RS11330	0.29	+1.3
2,526,081	-		LRK53_RS11330	0.79	-0.7
2,526,095	+		LRK53_RS11330	0.82	-1.4
2,526,269	+				-1.6
2,526,285	+				-0.4
2,526,285	+				-0.6
2,526,285	+				-1.6
2,526,285	+				+0.0
2,526,285	+				-0.6
2,526,285	+				-1.6
2,526,285	+				+1.2
2,526,285	+				-0.9
2,526,285	+				-1.0
2,526,285	+				-1.7
2,526,285	+				-0.2
2,526,285	+				-1.3
2,526,285	+				-0.5
2,526,285	+				-0.8
2,526,285	+				+0.6
2,526,285	+				-0.5
2,526,285	+				-2.0
2,526,286	-				+0.3
2,526,286	-				-0.9
2,526,286	-				-0.6
2,526,286	-				-0.8
2,526,286	-				+0.8
2,526,286	-				-1.4
2,526,286	-				+0.4
2,526,286	-				+0.8
2,526,286	-				+0.7
2,526,286	-				+0.2
2,526,286	-				-0.4
2,526,286	-				+1.6
2,526,286	-				-1.5
2,526,286	-				+0.3
2,526,286	-				-0.3
2,526,286	-				-0.9
2,526,286	-				-0.4
2,526,289	+				-1.1
2,526,289	+				+0.0
2,526,290	-				+0.4
2,526,290	-				-1.9
2,526,290	-				-0.5
2,526,330	+				-1.0
2,526,330	+				+0.1
2,526,330	+				-2.5
2,526,330	+				-0.3
2,526,330	+				-2.9
2,526,331	-				-1.7
2,526,331	-				-1.3
2,526,331	-				+0.1
2,526,331	-				-1.6
2,526,331	-				-0.8
2,526,421	+		LRK53_RS11335	0.35	-2.2
2,526,421	+		LRK53_RS11335	0.35	-1.0
2,526,430	+		LRK53_RS11335	0.38	-1.0
2,526,430	+		LRK53_RS11335	0.38	-2.0
2,526,431	-		LRK53_RS11335	0.39	+1.9
2,526,431	-		LRK53_RS11335	0.39	-0.8
2,526,431	-		LRK53_RS11335	0.39	-2.3
2,526,556	+		LRK53_RS11335	0.87	-0.2
2,526,556	+		LRK53_RS11335	0.87	-1.9
2,526,556	+		LRK53_RS11335	0.87	-0.8
2,526,556	+		LRK53_RS11335	0.87	+0.6
2,526,557	-		LRK53_RS11335	0.88	-1.3
2,526,557	-		LRK53_RS11335	0.88	-1.0
2,526,571	+				-1.5
2,526,571	+				-1.0
2,526,571	+				-0.4
2,526,571	+				-1.0
2,526,572	-				+0.1
2,526,572	-				-0.7
2,526,649	+				-0.1
2,526,683	+				+0.1
2,526,683	+				-2.6
2,526,785	+				-0.9
2,526,785	+				-0.0
2,526,785	+				+1.0
2,526,786	-				-2.0
2,526,790	+				-3.2
2,526,790	+				-0.2
2,526,790	+				-0.9
2,526,790	+				-1.4
2,526,790	+				+0.4
2,526,791	-				-1.3
2,526,791	-				-2.4
2,526,791	-				-0.2
2,526,803	+				+0.2
2,526,803	+				-0.7
2,526,803	+				+1.8
2,526,803	+				-0.6
2,526,967	+		LRK53_RS11340	0.14	-1.5
2,526,967	+		LRK53_RS11340	0.14	+0.7
2,526,967	+		LRK53_RS11340	0.14	-1.6
2,526,967	+		LRK53_RS11340	0.14	-1.2
2,526,967	+		LRK53_RS11340	0.14	-0.0
2,526,967	+		LRK53_RS11340	0.14	-1.6
2,526,967	+		LRK53_RS11340	0.14	+0.5
2,526,967	+		LRK53_RS11340	0.14	-1.2
2,526,968	-		LRK53_RS11340	0.14	-1.7
2,526,968	-		LRK53_RS11340	0.14	-1.6
2,526,968	-		LRK53_RS11340	0.14	+1.0
2,526,968	-		LRK53_RS11340	0.14	-1.9
2,526,968	-		LRK53_RS11340	0.14	-1.6
2,526,968	-		LRK53_RS11340	0.14	+0.1
2,526,968	-		LRK53_RS11340	0.14	-0.4
2,526,968	-		LRK53_RS11340	0.14	-2.4
2,526,999	-		LRK53_RS11340	0.16	-0.2
2,527,005	-		LRK53_RS11340	0.16	-2.6
2,527,005	-		LRK53_RS11340	0.16	-0.8
2,527,175	+		LRK53_RS11340	0.25	-0.3
2,527,175	+		LRK53_RS11340	0.25	-0.6
2,527,175	+		LRK53_RS11340	0.25	+0.8
2,527,175	+		LRK53_RS11340	0.25	+0.4
2,527,175	+		LRK53_RS11340	0.25	-0.4
2,527,176	-		LRK53_RS11340	0.25	-0.7
2,527,279	+		LRK53_RS11340	0.30	-2.4
2,527,280	-		LRK53_RS11340	0.30	-1.7
2,527,280	-		LRK53_RS11340	0.30	-0.1
2,527,280	-		LRK53_RS11340	0.30	-1.0
2,527,316	+		LRK53_RS11340	0.32	-1.6
2,527,316	+		LRK53_RS11340	0.32	-0.2
2,527,317	-		LRK53_RS11340	0.32	-1.0
2,527,317	-		LRK53_RS11340	0.32	-1.7
2,527,317	-		LRK53_RS11340	0.32	-1.6
2,527,919	+		LRK53_RS11340	0.62	-1.0
2,527,919	+		LRK53_RS11340	0.62	-0.7
2,527,919	+		LRK53_RS11340	0.62	+0.9
2,527,919	+		LRK53_RS11340	0.62	-2.2
2,527,919	+		LRK53_RS11340	0.62	-0.6
2,527,919	+		LRK53_RS11340	0.62	-0.9
2,527,920	-		LRK53_RS11340	0.62	+0.0
2,527,920	-		LRK53_RS11340	0.62	-0.4
2,527,920	-		LRK53_RS11340	0.62	-1.0
2,527,920	-		LRK53_RS11340	0.62	-0.4
2,527,967	+		LRK53_RS11340	0.64	-0.2
2,528,132	+		LRK53_RS11340	0.72	-0.4
2,528,413	-		LRK53_RS11340	0.86	-0.4
2,528,413	-		LRK53_RS11340	0.86	-0.6
2,528,465	+		LRK53_RS11340	0.89	-1.6
2,528,465	+		LRK53_RS11340	0.89	-0.8
2,528,466	-		LRK53_RS11340	0.89	-0.9
2,528,693	+				-0.9
2,528,694	-				-0.6
2,528,694	-				-1.0
2,528,694	-				-0.6
2,528,812	+				-1.4
2,528,812	+				-1.8
2,528,812	+				-0.5
2,528,812	+				-1.0
2,528,812	+				-0.4
2,528,812	+				-1.9
2,528,812	+				+0.6
2,528,812	+				+0.3
2,528,812	+				-1.2
2,528,812	+				-0.7
2,528,813	-				-1.7
2,528,813	-				-1.5
2,528,813	-				-0.9
2,528,813	-				-1.1
2,528,813	-				-0.7
2,528,813	-				-0.1
2,528,813	-				-0.6
2,528,813	-				-0.7
2,528,813	-				-0.1
2,528,813	-				-0.9
2,528,813	-				-0.7
2,528,813	-				-1.0
2,528,816	+				-1.2
2,528,816	+				+0.8
2,528,816	+				+0.1
2,528,816	+				-0.9
2,528,816	+				-3.7
2,528,816	+				-0.6
2,528,816	+				-1.2
2,528,816	+				-0.1
2,528,817	-				-0.3
2,528,884	+				-0.3
2,528,898	+				-0.9
2,528,898	+				-1.8
2,528,898	+				+0.5
2,528,908	-				-0.4
2,528,908	-				-0.6
2,528,911	-				-1.3
2,528,918	+				-0.9
2,528,930	+				-0.6
2,528,943	+				-0.3
2,528,943	+				-0.2
2,528,946	-				-1.2
2,528,965	+				-1.4
2,528,965	+				-2.3
2,528,965	+				-1.5
2,528,965	+				-1.7
2,528,965	+				-1.0
2,528,965	+				-0.1
2,528,965	+				-3.0
2,528,965	+				+0.4
2,528,965	+				-0.7
2,528,965	+				+0.5
2,528,965	+				-0.7
2,528,965	+				-1.2
2,528,965	+				+0.1
2,528,965	+				-0.7
2,528,965	+				-0.5
2,528,965	+				+1.0
2,528,965	+				-1.6
2,528,965	+				-1.0
2,528,965	+				-0.6
2,528,965	+				-0.5
2,528,965	+				-1.3
2,528,965	+				-0.6
2,528,966	-				-0.4
2,528,966	-				-0.9
2,528,966	-				+0.1
2,528,966	-				-0.7
2,528,970	+				+1.3
2,528,970	+				-0.9
2,528,970	+				-0.4
2,528,970	+				-0.7
2,528,970	+				+0.6
2,528,970	+				+1.2
2,528,970	+				-0.2
2,528,970	+				+0.2
2,528,970	+				-0.2
2,528,971	-				-2.4
2,528,971	-				-0.2
2,529,213	+		LRK53_RS11345	0.29	-1.0
2,529,214	-		LRK53_RS11345	0.29	-0.2
2,529,214	-		LRK53_RS11345	0.29	+1.3
2,529,237	+		LRK53_RS11345	0.32	-0.5
2,529,237	+		LRK53_RS11345	0.32	-0.2
2,529,237	+		LRK53_RS11345	0.32	-1.4
2,529,237	+		LRK53_RS11345	0.32	+1.3
2,529,237	+		LRK53_RS11345	0.32	-1.2
2,529,237	+		LRK53_RS11345	0.32	+1.3
2,529,237	+		LRK53_RS11345	0.32	+1.9
2,529,238	-		LRK53_RS11345	0.32	-0.3
2,529,238	-		LRK53_RS11345	0.32	-1.6
2,529,238	-		LRK53_RS11345	0.32	-0.3
2,529,333	+		LRK53_RS11345	0.43	+0.1
2,529,333	+		LRK53_RS11345	0.43	-0.0
2,529,333	+		LRK53_RS11345	0.43	-1.0
2,529,333	+		LRK53_RS11345	0.43	+0.2
2,529,333	+		LRK53_RS11345	0.43	-0.7
2,529,333	+		LRK53_RS11345	0.43	-1.3
2,529,333	+		LRK53_RS11345	0.43	-0.8
2,529,333	+		LRK53_RS11345	0.43	+0.4
2,529,333	+		LRK53_RS11345	0.43	+1.4
2,529,333	+		LRK53_RS11345	0.43	+2.4
2,529,333	+		LRK53_RS11345	0.43	+0.2
2,529,333	+		LRK53_RS11345	0.43	-2.8
2,529,333	+		LRK53_RS11345	0.43	-1.4
2,529,333	+		LRK53_RS11345	0.43	+0.6
2,529,333	+		LRK53_RS11345	0.43	-1.6
2,529,333	+		LRK53_RS11345	0.43	+0.1
2,529,333	+		LRK53_RS11345	0.43	-0.4
2,529,333	+		LRK53_RS11345	0.43	-0.3
2,529,334	-		LRK53_RS11345	0.43	-0.6
2,529,334	-		LRK53_RS11345	0.43	-0.0
2,529,334	-		LRK53_RS11345	0.43	-0.4
2,529,334	-		LRK53_RS11345	0.43	-1.8
2,529,334	-		LRK53_RS11345	0.43	-0.9
2,529,334	-		LRK53_RS11345	0.43	+0.9
2,529,334	-		LRK53_RS11345	0.43	-1.7
2,529,334	-		LRK53_RS11345	0.43	-0.6
2,529,334	-		LRK53_RS11345	0.43	-1.0
2,529,334	-		LRK53_RS11345	0.43	+0.6
2,529,567	+		LRK53_RS11345	0.68	-1.2
2,529,567	+		LRK53_RS11345	0.68	-0.9
2,529,567	+		LRK53_RS11345	0.68	-1.8
2,529,567	+		LRK53_RS11345	0.68	-2.0
2,529,567	+		LRK53_RS11345	0.68	-2.0
2,529,567	+		LRK53_RS11345	0.68	-0.2
2,529,567	+		LRK53_RS11345	0.68	-0.5
2,529,568	-		LRK53_RS11345	0.68	+0.7
2,529,568	-		LRK53_RS11345	0.68	-0.5
2,529,568	-		LRK53_RS11345	0.68	-0.5
2,529,568	-		LRK53_RS11345	0.68	-0.9
2,529,568	-		LRK53_RS11345	0.68	-1.4
2,529,568	-		LRK53_RS11345	0.68	-0.4