Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS10355

Experiment: biofilm; Day2; NLDM;

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	biofilm; Day2; NLDM;
2,317,060	+		LRK53_RS10350	0.78	+1.0
2,317,060	+		LRK53_RS10350	0.78	+0.2
2,317,060	+		LRK53_RS10350	0.78	+1.0
2,317,061	-		LRK53_RS10350	0.78	-3.0
2,317,061	-		LRK53_RS10350	0.78	-0.6
2,317,061	-		LRK53_RS10350	0.78	+0.3
2,317,249	+		LRK53_RS10350	0.85	-0.8
2,317,249	+		LRK53_RS10350	0.85	+0.4
2,317,249	+		LRK53_RS10350	0.85	-0.9
2,317,250	-		LRK53_RS10350	0.85	-0.5
2,317,250	-		LRK53_RS10350	0.85	+1.2
2,317,250	-		LRK53_RS10350	0.85	-0.6
2,317,334	+		LRK53_RS10350	0.88	-1.0
2,317,335	-		LRK53_RS10350	0.88	-0.3
2,317,341	+		LRK53_RS10350	0.88	-2.2
2,317,341	+		LRK53_RS10350	0.88	-0.8
2,317,342	-		LRK53_RS10350	0.88	-0.9
2,317,342	-		LRK53_RS10350	0.88	+0.0
2,317,566	+				+0.4
2,317,590	+				-0.9
2,317,590	+				-0.7
2,317,590	+				-0.9
2,317,591	-				-0.8
2,317,591	-				+0.1
2,317,591	-				+0.1
2,317,591	-				-0.3
2,317,593	+				-1.6
2,317,593	+				+0.7
2,317,594	-				+0.3
2,317,594	-				+1.3
2,317,613	+				-0.7
2,317,613	+				-1.6
2,317,614	-				-0.1
2,317,630	+				-0.7
2,317,630	+				-1.8
2,317,630	+				-0.2
2,317,630	+				-1.9
2,317,630	+				-1.1
2,317,630	+				-0.5
2,317,630	+				-1.1
2,317,630	+				+1.0
2,317,630	+				-0.5
2,317,631	-				-0.2
2,317,631	-				-2.2
2,317,631	-				-0.3
2,317,631	-				-1.9
2,317,631	-				-2.9
2,317,631	-				+0.4
2,317,632	+				-0.4
2,317,632	+				-0.8
2,317,632	+				+0.7
2,317,632	+				-0.9
2,317,632	+				-0.9
2,317,632	+				-1.1
2,317,632	+				-1.1
2,317,632	+				-0.1
2,317,632	+				-3.2
2,317,632	+				-2.2
2,317,632	+				-0.8
2,317,632	+				-1.0
2,317,632	+				+0.3
2,317,632	+				+0.6
2,317,633	-				-1.3
2,317,633	-				-0.3
2,317,633	-				+0.0
2,317,633	-				-1.3
2,317,633	-				-0.9
2,317,633	-				-0.5
2,317,633	-				-0.3
2,317,633	-				-1.8
2,317,633	-				+0.4
2,317,633	-				-1.9
2,317,720	-				+0.6
2,317,723	+				-0.5
2,317,723	+				-1.1
2,317,723	+				+0.2
2,317,723	+				-1.1
2,317,724	-				-0.6
2,317,724	-				-0.9
2,317,724	-				-0.9
2,317,724	-				+0.9
2,317,724	-				-0.6
2,317,724	-				+0.2
2,317,755	+				-0.9
2,317,755	+				-0.2
2,317,755	+				+0.2
2,317,755	+				+0.2
2,317,755	+				-0.7
2,317,755	+				-3.5
2,317,755	+				+0.7
2,317,755	+				-0.2
2,317,755	+				+0.1
2,317,755	+				-3.1
2,317,755	+				+0.5
2,317,755	+				-0.5
2,317,756	-				-0.5
2,317,756	-				-1.7
2,317,756	-				-0.2
2,317,756	-				+0.0
2,317,756	-				-0.4
2,317,756	-				-1.2
2,317,756	-				+1.5
2,317,787	+				-2.4
2,317,787	+				+0.7
2,317,787	+				-1.3
2,317,788	-				+1.2
2,317,794	+				-0.7
2,317,794	+				-0.2
2,317,794	+				-1.3
2,317,794	+				-0.6
2,317,794	+				-0.9
2,317,794	+				+0.7
2,317,795	-				+0.7
2,317,795	-				-0.7
2,317,795	-				+1.1
2,317,819	+				-0.3
2,317,819	+				-0.2
2,317,824	+				+0.3
2,317,849	+				-1.5
2,317,849	+				-1.9
2,317,899	+				+1.4
2,317,899	+				-0.9
2,317,900	-				+0.3
2,317,960	+				+0.1
2,317,960	+				-0.5
2,317,960	+				-2.3
2,317,964	+				-0.0
2,317,964	+				-0.2
2,317,964	+				-0.5
2,317,964	+				+1.4
2,317,964	+				-0.6
2,317,964	+				+0.3
2,317,964	+				-0.0
2,317,964	+				-0.3
2,317,964	+				-0.3
2,317,964	+				+0.1
2,317,964	+				-1.0
2,317,964	+				-0.5
2,317,964	+				-1.6
2,317,964	+				+0.9
2,317,964	+				-1.3
2,317,964	+				-0.3
2,317,964	+				+0.2
2,317,964	+				-1.2
2,317,964	+				-0.1
2,317,964	+				+0.6
2,317,964	+				-0.2
2,317,964	+				-1.1
2,317,964	+				-1.0
2,317,964	+				+0.0
2,317,964	+				-0.6
2,317,964	+				-0.6
2,317,964	+				-1.1
2,317,964	+				-1.1
2,317,964	+				-1.1
2,317,964	+				-2.1
2,317,964	+				-0.4
2,317,964	+				-0.6
2,317,964	+				-1.2
2,317,964	+				-0.1
2,317,964	+				-0.6
2,317,964	+				-1.6
2,317,965	-				-2.1
2,317,965	-				+0.3
2,317,965	-				-1.1
2,317,965	-				-0.6
2,317,965	-				+1.4
2,317,965	-				-0.6
2,317,965	-				-1.6
2,317,965	-				-0.8
2,317,965	-				-1.6
2,317,965	-				-0.1
2,317,965	-				-2.2
2,317,965	-				-1.8
2,317,965	-				-0.9
2,317,965	-				-0.8
2,317,965	-				-0.8
2,317,965	-				-2.3
2,317,965	-				-0.0
2,317,965	-				-0.2
2,317,965	-				-0.3
2,317,965	-				-0.3
2,317,965	-				+1.6
2,317,965	-				+0.2
2,317,965	-				-1.0
2,317,965	-				-1.8
2,317,965	-				+0.7
2,317,965	-				+0.4
2,317,965	-				-1.2
2,317,965	-				-1.5
2,317,965	-				-0.9
2,317,965	-				-0.3
2,317,968	+				+1.4
2,317,968	+				-1.5
2,317,968	+				-1.8
2,317,968	+				+0.8
2,317,968	+				-0.2
2,317,968	+				-0.1
2,317,968	+				-0.8
2,317,968	+				-2.4
2,317,968	+				-1.6
2,317,968	+				-2.1
2,317,968	+				-1.4
2,317,968	+				-1.2
2,317,968	+				+0.4
2,317,968	+				-1.3
2,317,968	+				+0.5
2,317,968	+				-1.1
2,317,968	+				-1.3
2,317,968	+				-1.2
2,317,968	+				-1.4
2,317,968	+				-0.6
2,317,968	+				-0.6
2,317,968	+				+0.2
2,317,968	+				-0.4
2,317,968	+				-1.2
2,317,968	+				+0.4
2,317,968	+				-0.9
2,317,968	+				+1.2
2,317,968	+				-0.9
2,317,968	+				-0.7
2,317,968	+				-2.5
2,317,968	+				-0.5
2,317,968	+				-1.0
2,317,968	+				-0.9
2,317,968	+				+0.4
2,317,969	-				-0.8
2,317,969	-				-0.2
2,317,969	-				-3.2
2,317,969	-				+0.8
2,317,969	-				-0.3
2,317,969	-				-1.7
2,317,969	-				+1.4
2,317,969	-				+0.2
2,317,969	-				+0.1
2,317,969	-				-1.1
2,317,969	-				-0.2
2,317,969	-				-0.2
2,317,969	-				+0.3
2,317,969	-				+0.4
2,317,969	-				-0.3
2,317,969	-				-1.2
2,317,969	-				-1.5
2,317,969	-				-0.8
2,317,969	-				-1.5
2,317,969	-				+0.5
2,317,969	-				+0.1
2,317,969	-				-1.7
2,317,969	-				-1.6
2,317,969	-				+1.6
2,317,969	-				+0.5
2,317,969	-				-0.6
2,317,969	-				-0.5
2,317,969	-				-1.1
2,317,969	-				-0.2
2,317,969	-				-0.4
2,317,969	-				-1.2
2,317,969	-				-1.1
2,317,969	-				+0.0
2,317,969	-				+0.2
2,317,992	+				-0.5
2,317,992	+				-2.4
2,317,992	+				-0.1
2,317,992	+				+1.2
2,317,993	-				-1.2
2,317,993	-				-1.7
2,317,993	-				+0.0
2,318,034	+				-0.7
2,318,034	+				+0.7
2,318,035	-				-0.1
2,318,035	-				-0.3
2,318,035	-				-0.2
2,318,059	+				-0.8
2,318,059	+				-2.2
2,318,059	+				-0.2
2,318,060	-				-0.3
2,318,060	-				-2.9
2,318,060	-				-0.8
2,318,060	-				+0.8
2,318,060	-				-0.9
2,318,065	+				-1.5
2,318,065	+				-0.1
2,318,065	+				-1.0
2,318,065	+				-0.5
2,318,065	+				-1.1
2,318,065	+				-0.5
2,318,065	+				-0.7
2,318,065	+				+0.7
2,318,065	+				-1.2
2,318,065	+				+3.6
2,318,066	-				-1.5
2,318,066	-				-0.8
2,318,066	-				-0.1
2,318,066	-				-0.0
2,318,066	-				-1.3
2,318,066	-				+0.4
2,318,066	-				-0.8
2,318,066	-				-1.0
2,318,066	-				-0.7
2,318,066	-				-0.6
2,318,066	-				-3.1
2,318,066	-				-0.2
2,318,066	-				+0.3
2,318,066	-				-1.6
2,318,066	-				+0.0
2,318,083	+				-0.3
2,318,083	+				-1.1
2,318,083	+				-1.5
2,318,083	+				-0.3
2,318,083	+				+0.8
2,318,083	+				+1.0
2,318,083	+				-0.9
2,318,083	+				-0.5
2,318,084	-				-0.3
2,318,084	-				-1.4
2,318,360	+		LRK53_RS10355	0.12	+0.2
2,318,360	+		LRK53_RS10355	0.12	-1.6
2,318,360	+		LRK53_RS10355	0.12	-2.2
2,318,361	-		LRK53_RS10355	0.12	-1.1
2,318,458	+		LRK53_RS10355	0.15	-0.7
2,318,458	+		LRK53_RS10355	0.15	+0.8
2,318,458	+		LRK53_RS10355	0.15	-0.5
2,318,458	+		LRK53_RS10355	0.15	-0.8
2,318,458	+		LRK53_RS10355	0.15	-1.3
2,318,458	+		LRK53_RS10355	0.15	-0.7
2,318,458	+		LRK53_RS10355	0.15	-0.1
2,318,458	+		LRK53_RS10355	0.15	-0.8
2,318,458	+		LRK53_RS10355	0.15	-0.0
2,318,458	+		LRK53_RS10355	0.15	-0.8
2,318,458	+		LRK53_RS10355	0.15	-2.7
2,318,459	-		LRK53_RS10355	0.15	-1.8
2,318,459	-		LRK53_RS10355	0.15	-0.9
2,318,459	-		LRK53_RS10355	0.15	+0.3
2,318,459	-		LRK53_RS10355	0.15	+1.0
2,318,459	-		LRK53_RS10355	0.15	-1.2
2,318,459	-		LRK53_RS10355	0.15	-0.5
2,318,459	-		LRK53_RS10355	0.15	-1.9
2,318,467	+		LRK53_RS10355	0.15	-0.2
2,318,488	+		LRK53_RS10355	0.16	-2.3
2,318,488	+		LRK53_RS10355	0.16	-0.8
2,318,488	+		LRK53_RS10355	0.16	-0.2
2,318,488	+		LRK53_RS10355	0.16	-2.2
2,318,488	+		LRK53_RS10355	0.16	-1.9
2,318,488	+		LRK53_RS10355	0.16	-1.2
2,318,488	+		LRK53_RS10355	0.16	-1.3
2,318,488	+		LRK53_RS10355	0.16	-1.1
2,318,488	+		LRK53_RS10355	0.16	-2.6
2,318,488	+		LRK53_RS10355	0.16	-0.6
2,318,488	+		LRK53_RS10355	0.16	+0.8
2,318,489	-		LRK53_RS10355	0.16	-1.0
2,318,489	-		LRK53_RS10355	0.16	-1.1
2,318,489	-		LRK53_RS10355	0.16	-0.8
2,318,489	-		LRK53_RS10355	0.16	-2.3
2,318,489	-		LRK53_RS10355	0.16	-0.3
2,318,489	-		LRK53_RS10355	0.16	-0.5
2,318,489	-		LRK53_RS10355	0.16	-0.0
2,318,489	-		LRK53_RS10355	0.16	-1.1
2,318,489	-		LRK53_RS10355	0.16	+0.2
2,318,782	+		LRK53_RS10355	0.25	-0.4
2,318,782	+		LRK53_RS10355	0.25	+1.3
2,318,782	+		LRK53_RS10355	0.25	-2.8
2,318,783	-		LRK53_RS10355	0.25	-3.4
2,318,845	+		LRK53_RS10355	0.27	+0.8
2,318,845	+		LRK53_RS10355	0.27	-0.5
2,318,846	-		LRK53_RS10355	0.27	-1.7
2,318,846	-		LRK53_RS10355	0.27	-0.9
2,318,846	-		LRK53_RS10355	0.27	-2.6
2,318,866	+		LRK53_RS10355	0.28	-0.9
2,318,866	+		LRK53_RS10355	0.28	-0.5
2,318,866	+		LRK53_RS10355	0.28	-0.9
2,318,866	+		LRK53_RS10355	0.28	-1.5
2,318,867	-		LRK53_RS10355	0.28	-1.0
2,318,867	-		LRK53_RS10355	0.28	+0.6
2,318,867	-		LRK53_RS10355	0.28	-0.3
2,319,101	-		LRK53_RS10355	0.36	-2.4
2,319,101	-		LRK53_RS10355	0.36	-1.2
2,319,256	+		LRK53_RS10355	0.41	+0.9
2,319,257	-		LRK53_RS10355	0.41	-0.1
2,319,435	-		LRK53_RS10355	0.46	-1.7
2,319,435	-		LRK53_RS10355	0.46	-1.7
2,319,543	-		LRK53_RS10355	0.50	+1.5
2,319,594	-		LRK53_RS10355	0.51	+0.4
2,319,871	+		LRK53_RS10355	0.60	-1.5
2,319,871	+		LRK53_RS10355	0.60	-1.0
2,319,871	+		LRK53_RS10355	0.60	+1.2
2,319,871	+		LRK53_RS10355	0.60	-1.2
2,319,871	+		LRK53_RS10355	0.60	-1.0
2,319,871	+		LRK53_RS10355	0.60	-1.5
2,319,872	-		LRK53_RS10355	0.60	-1.3
2,319,872	-		LRK53_RS10355	0.60	+0.4
2,319,872	-		LRK53_RS10355	0.60	+0.7
2,320,101	+		LRK53_RS10355	0.68	-0.8
2,320,101	+		LRK53_RS10355	0.68	-1.3
2,320,101	+		LRK53_RS10355	0.68	-0.9
2,320,101	+		LRK53_RS10355	0.68	+0.2
2,320,101	+		LRK53_RS10355	0.68	+0.4
2,320,102	-		LRK53_RS10355	0.68	-1.9
2,320,102	-		LRK53_RS10355	0.68	-1.2
2,320,102	-		LRK53_RS10355	0.68	-0.2
2,320,148	+		LRK53_RS10355	0.69	-0.1
2,320,148	+		LRK53_RS10355	0.69	-0.9
2,320,148	+		LRK53_RS10355	0.69	-2.1
2,320,148	+		LRK53_RS10355	0.69	+0.1
2,320,148	+		LRK53_RS10355	0.69	-0.2
2,320,148	+		LRK53_RS10355	0.69	-1.5
2,320,148	+		LRK53_RS10355	0.69	-2.8
2,320,148	+		LRK53_RS10355	0.69	-1.6
2,320,149	-		LRK53_RS10355	0.69	-2.5
2,320,149	-		LRK53_RS10355	0.69	-1.0
2,320,149	-		LRK53_RS10355	0.69	-0.8
2,320,149	-		LRK53_RS10355	0.69	-0.4
2,320,149	-		LRK53_RS10355	0.69	-1.0
2,320,205	+		LRK53_RS10355	0.71	-0.2
2,320,212	+		LRK53_RS10355	0.71	-1.8
2,320,280	-		LRK53_RS10355	0.74	-0.2
2,320,280	-		LRK53_RS10355	0.74	-0.8
2,320,282	+		LRK53_RS10355	0.74	-0.7
2,320,282	+		LRK53_RS10355	0.74	-1.7
2,320,282	+		LRK53_RS10355	0.74	-2.2
2,320,282	+		LRK53_RS10355	0.74	-0.0
2,320,423	+		LRK53_RS10355	0.78	-1.3
2,320,423	+		LRK53_RS10355	0.78	-1.8
2,320,424	-		LRK53_RS10355	0.78	-1.7
2,320,681	-		LRK53_RS10355	0.86	+1.2
2,321,218	+				-1.2
2,321,218	+				-1.9
2,321,218	+				-2.5
2,321,218	+				+0.2
2,321,218	+				-2.1
2,321,218	+				-0.4
2,321,218	+				+0.6
2,321,218	+				-0.4
2,321,219	-				-1.3
2,321,219	-				+0.6
2,321,219	-				+0.4
2,321,219	-				-1.7
2,321,219	-				-0.5
2,321,219	-				-0.8
2,321,219	-				-1.2
2,321,219	-				+0.6
2,321,219	-				+1.2
2,321,219	-				-1.8
2,321,219	-				-2.3
2,321,219	-				-1.6
2,321,219	-				+0.2
2,321,219	-				-2.8
2,321,219	-				-1.4
2,321,219	-				-2.3
2,321,219	-				+1.8
2,321,219	-				-1.7
2,321,219	-				+0.8
2,321,219	-				+0.2
2,321,260	+				-1.8
2,321,260	+				+0.2
2,321,282	+				-0.9
2,321,283	-				-0.1
2,321,495	-		LRK53_RS10360	0.20	-0.5
2,321,749	+		LRK53_RS10360	0.49	-0.2
2,321,750	-		LRK53_RS10360	0.49	-0.8
2,321,750	-		LRK53_RS10360	0.49	-1.5
2,321,790	-		LRK53_RS10360	0.53	-1.9
2,321,790	-		LRK53_RS10360	0.53	+0.7
2,321,790	-		LRK53_RS10360	0.53	-1.9
2,321,790	-		LRK53_RS10360	0.53	-0.9
2,322,007	+		LRK53_RS10360	0.77	-0.7
2,322,007	+		LRK53_RS10360	0.77	-1.7
2,322,007	+		LRK53_RS10360	0.77	-2.2
2,322,007	+		LRK53_RS10360	0.77	+0.6
2,322,007	+		LRK53_RS10360	0.77	-1.9
2,322,008	-		LRK53_RS10360	0.77	-0.6
2,322,008	-		LRK53_RS10360	0.77	-1.8
2,322,008	-		LRK53_RS10360	0.77	-0.9
2,322,008	-		LRK53_RS10360	0.77	-1.1
2,322,008	-		LRK53_RS10360	0.77	-0.3
2,322,070	+		LRK53_RS10360	0.84	+0.1
2,322,082	+		LRK53_RS10360	0.86	-1.3
2,322,082	+		LRK53_RS10360	0.86	-0.2
2,322,082	+		LRK53_RS10360	0.86	-1.2
2,322,082	+		LRK53_RS10360	0.86	-1.8
2,322,083	-		LRK53_RS10360	0.86	-0.5
2,322,083	-		LRK53_RS10360	0.86	-2.1
2,322,083	-		LRK53_RS10360	0.86	-0.5