Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS10055

Experiment: biofilm; Day2; NLDM;

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	biofilm; Day2; NLDM;
2,248,178	+		LRK53_RS10045	0.82	-0.2
2,248,178	+		LRK53_RS10045	0.82	-3.7
2,248,178	+		LRK53_RS10045	0.82	+0.1
2,248,178	+		LRK53_RS10045	0.82	-1.3
2,248,179	-		LRK53_RS10045	0.83	+1.7
2,248,179	-		LRK53_RS10045	0.83	-0.9
2,248,179	-		LRK53_RS10045	0.83	-1.6
2,248,179	-		LRK53_RS10045	0.83	+1.1
2,248,179	-		LRK53_RS10045	0.83	+0.8
2,248,190	-		LRK53_RS10045	0.84	+0.0
2,248,430	+		LRK53_RS10050	0.16	-1.6
2,248,430	+		LRK53_RS10050	0.16	-1.9
2,248,431	-		LRK53_RS10050	0.16	-0.9
2,248,634	+		LRK53_RS10050	0.42	-1.3
2,248,634	+		LRK53_RS10050	0.42	-1.7
2,248,635	-		LRK53_RS10050	0.42	+3.2
2,248,635	-		LRK53_RS10050	0.42	-1.0
2,248,881	+		LRK53_RS10050	0.73	-1.3
2,248,881	+		LRK53_RS10050	0.73	-0.1
2,248,881	+		LRK53_RS10050	0.73	-0.9
2,248,881	+		LRK53_RS10050	0.73	-1.2
2,248,882	-		LRK53_RS10050	0.74	-1.0
2,249,117	-				-1.3
2,249,117	-				-0.4
2,249,117	-				-0.4
2,249,119	+				-1.8
2,249,238	+		LRK53_RS10055	0.29	-1.6
2,249,238	+		LRK53_RS10055	0.29	-0.7
2,249,239	-		LRK53_RS10055	0.29	+0.7
2,249,239	-		LRK53_RS10055	0.29	+0.9
2,249,239	-		LRK53_RS10055	0.29	-0.9
2,249,239	-		LRK53_RS10055	0.29	-2.5
2,249,245	+		LRK53_RS10055	0.30	-2.3
2,249,245	+		LRK53_RS10055	0.30	-0.2
2,249,245	+		LRK53_RS10055	0.30	-1.0
2,249,245	+		LRK53_RS10055	0.30	-0.6
2,249,245	+		LRK53_RS10055	0.30	-1.5
2,249,246	-		LRK53_RS10055	0.31	-1.4
2,249,246	-		LRK53_RS10055	0.31	-0.4
2,249,246	-		LRK53_RS10055	0.31	-0.9
2,249,246	-		LRK53_RS10055	0.31	+1.0
2,249,246	-		LRK53_RS10055	0.31	-1.2
2,249,246	-		LRK53_RS10055	0.31	-2.0
2,249,246	-		LRK53_RS10055	0.31	+1.6
2,249,246	-		LRK53_RS10055	0.31	-1.5
2,249,246	-		LRK53_RS10055	0.31	-1.5
2,249,246	-		LRK53_RS10055	0.31	-1.5
2,249,246	-		LRK53_RS10055	0.31	-1.9
2,249,246	-		LRK53_RS10055	0.31	-1.4
2,249,246	-		LRK53_RS10055	0.31	-1.3
2,249,246	-		LRK53_RS10055	0.31	-1.0
2,249,264	-		LRK53_RS10055	0.34	-2.5
2,249,264	-		LRK53_RS10055	0.34	-1.6
2,249,264	-		LRK53_RS10055	0.34	-2.8
2,249,264	-		LRK53_RS10055	0.34	+0.4
2,249,270	+		LRK53_RS10055	0.35	+0.1
2,249,270	+		LRK53_RS10055	0.35	-1.5
2,249,270	+		LRK53_RS10055	0.35	-0.6
2,249,270	+		LRK53_RS10055	0.35	+0.0
2,249,270	+		LRK53_RS10055	0.35	-1.0
2,249,270	+		LRK53_RS10055	0.35	-0.6
2,249,271	-		LRK53_RS10055	0.35	+1.9
2,249,271	-		LRK53_RS10055	0.35	+0.1
2,249,271	-		LRK53_RS10055	0.35	-1.1
2,249,271	-		LRK53_RS10055	0.35	-2.2
2,249,271	-		LRK53_RS10055	0.35	+1.4
2,249,386	+		LRK53_RS10055	0.57	-1.2
2,249,386	+		LRK53_RS10055	0.57	-2.4
2,249,386	+		LRK53_RS10055	0.57	-2.9
2,249,386	+		LRK53_RS10055	0.57	+1.4
2,249,386	+		LRK53_RS10055	0.57	+0.7
2,249,386	+		LRK53_RS10055	0.57	-0.7
2,249,386	+		LRK53_RS10055	0.57	-1.1
2,249,386	+		LRK53_RS10055	0.57	+0.6
2,249,386	+		LRK53_RS10055	0.57	-1.0
2,249,386	+		LRK53_RS10055	0.57	+0.3
2,249,386	+		LRK53_RS10055	0.57	-1.7
2,249,387	-		LRK53_RS10055	0.58	-1.3
2,249,387	-		LRK53_RS10055	0.58	-0.7
2,249,387	-		LRK53_RS10055	0.58	+0.1
2,249,387	-		LRK53_RS10055	0.58	-1.0
2,249,387	-		LRK53_RS10055	0.58	+0.9
2,249,387	-		LRK53_RS10055	0.58	-1.7
2,249,387	-		LRK53_RS10055	0.58	-0.7
2,249,387	-		LRK53_RS10055	0.58	-1.0
2,249,387	-		LRK53_RS10055	0.58	-0.2
2,249,387	-		LRK53_RS10055	0.58	-0.6
2,249,387	-		LRK53_RS10055	0.58	-0.5
2,249,410	+		LRK53_RS10055	0.62	-1.8
2,249,538	+		LRK53_RS10055	0.87	+0.7
2,249,538	+		LRK53_RS10055	0.87	-1.7
2,249,539	-		LRK53_RS10055	0.87	-0.9
2,249,539	-		LRK53_RS10055	0.87	+0.3
2,249,587	-				-0.9
2,249,658	+				+0.7
2,249,659	-				-1.9
2,249,888	+		LRK53_RS10060	0.43	-0.5
2,249,888	+		LRK53_RS10060	0.43	+2.4
2,249,889	-		LRK53_RS10060	0.43	+0.3
2,249,889	-		LRK53_RS10060	0.43	-1.5
2,249,889	-		LRK53_RS10060	0.43	-1.3
2,250,029	+		LRK53_RS10060	0.66	+0.1
2,250,029	+		LRK53_RS10060	0.66	-0.1
2,250,029	+		LRK53_RS10060	0.66	-0.3
2,250,029	+		LRK53_RS10060	0.66	-1.9
2,250,030	-		LRK53_RS10060	0.66	-1.0
2,250,093	-		LRK53_RS10060	0.77	-3.0
2,250,128	+		LRK53_RS10060	0.83	-1.3
2,250,128	+		LRK53_RS10060	0.83	-0.7
2,250,128	+		LRK53_RS10060	0.83	-1.8
2,250,128	+		LRK53_RS10060	0.83	-0.2
2,250,128	+		LRK53_RS10060	0.83	-0.1
2,250,128	+		LRK53_RS10060	0.83	-1.4
2,250,129	-		LRK53_RS10060	0.83	+0.8
2,250,218	+				-0.4
2,250,218	+				+0.1
2,250,218	+				+0.2
2,250,218	+				-1.3
2,250,218	+				-1.3
2,250,219	-				-0.7
2,250,219	-				-1.0
2,250,219	-				+0.4
2,250,219	-				-1.2
2,250,219	-				-1.2
2,250,219	-				-1.5
2,250,219	-				-0.9
2,250,219	-				-0.7
2,250,219	-				+0.3
2,250,219	-				-1.0
2,250,219	-				+1.2
2,250,444	+				-0.8
2,250,444	+				-0.6
2,250,444	+				-0.6
2,250,444	+				-0.8
2,250,444	+				-0.9
2,250,444	+				-1.6
2,250,444	+				+1.1
2,250,444	+				+2.2
2,250,444	+				-0.6
2,250,444	+				-0.5
2,250,444	+				-1.0
2,250,444	+				-1.5
2,250,444	+				-5.0
2,250,444	+				+0.1
2,250,444	+				+0.6
2,250,444	+				-0.2
2,250,444	+				-1.3
2,250,444	+				-0.7
2,250,444	+				+0.3
2,250,444	+				+0.4
2,250,444	+				+0.3
2,250,444	+				-0.4
2,250,444	+				+0.0
2,250,444	+				-1.9
2,250,444	+				-1.6
2,250,444	+				-0.6
2,250,444	+				-0.9
2,250,444	+				-1.4
2,250,444	+				-0.3
2,250,444	+				+0.3
2,250,444	+				-1.6
2,250,444	+				+0.1
2,250,444	+				-1.0
2,250,444	+				-1.3
2,250,444	+				-0.2
2,250,444	+				+0.5
2,250,444	+				-1.2
2,250,444	+				-1.5
2,250,444	+				-0.6
2,250,444	+				+0.1
2,250,445	-				-0.6
2,250,445	-				-0.9
2,250,445	-				-0.1
2,250,445	-				-1.1
2,250,445	-				-1.8
2,250,445	-				-1.2
2,250,445	-				+0.5
2,250,445	-				-0.5
2,250,445	-				-0.5
2,250,445	-				-2.4
2,250,445	-				-1.2
2,250,445	-				-1.4
2,250,445	-				-0.8
2,250,445	-				-0.6
2,250,445	-				-0.1
2,250,445	-				-1.0
2,250,445	-				-0.4
2,250,445	-				-1.0
2,250,445	-				-1.8
2,250,445	-				-1.6
2,250,445	-				-0.7
2,250,445	-				-0.7
2,250,445	-				-1.8
2,250,445	-				+0.9
2,250,445	-				-1.3
2,250,445	-				-0.8
2,250,445	-				-1.7
2,250,527	+		LRK53_RS10065	0.13	+0.2
2,250,527	+		LRK53_RS10065	0.13	-0.2
2,250,527	+		LRK53_RS10065	0.13	+0.8
2,250,527	+		LRK53_RS10065	0.13	-0.2
2,250,527	+		LRK53_RS10065	0.13	-1.3
2,250,527	+		LRK53_RS10065	0.13	+1.3
2,250,527	+		LRK53_RS10065	0.13	-0.6
2,250,527	+		LRK53_RS10065	0.13	-1.0
2,250,527	+		LRK53_RS10065	0.13	-1.5
2,250,527	+		LRK53_RS10065	0.13	-0.5
2,250,528	-		LRK53_RS10065	0.13	-0.7
2,250,528	-		LRK53_RS10065	0.13	+0.7
2,250,528	-		LRK53_RS10065	0.13	-1.2
2,250,528	-		LRK53_RS10065	0.13	-0.5
2,250,528	-		LRK53_RS10065	0.13	-0.3