Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS09950

Experiment: biofilm; Day2; NLDM;

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	biofilm; Day2; NLDM;
2,232,648	+		LRK53_RS09945	0.45	-1.7
2,232,648	+		LRK53_RS09945	0.45	-0.8
2,232,649	-		LRK53_RS09945	0.45	-3.1
2,232,859	+		LRK53_RS09945	0.58	+1.3
2,232,860	-		LRK53_RS09945	0.58	-1.6
2,232,860	-		LRK53_RS09945	0.58	-0.2
2,232,860	-		LRK53_RS09945	0.58	-2.7
2,232,860	-		LRK53_RS09945	0.58	+1.1
2,232,860	-		LRK53_RS09945	0.58	-0.1
2,232,867	+		LRK53_RS09945	0.58	-1.6
2,232,868	-		LRK53_RS09945	0.58	-0.8
2,232,891	+		LRK53_RS09945	0.60	-0.4
2,232,891	+		LRK53_RS09945	0.60	+0.0
2,232,892	-		LRK53_RS09945	0.60	-0.8
2,232,910	+		LRK53_RS09945	0.61	-1.6
2,232,910	+		LRK53_RS09945	0.61	-1.7
2,232,911	-		LRK53_RS09945	0.61	-1.3
2,232,911	-		LRK53_RS09945	0.61	-1.4
2,233,017	-		LRK53_RS09945	0.67	-0.4
2,233,074	+		LRK53_RS09945	0.71	+0.6
2,233,074	+		LRK53_RS09945	0.71	+0.2
2,233,074	+		LRK53_RS09945	0.71	+0.2
2,233,074	+		LRK53_RS09945	0.71	-1.6
2,233,074	+		LRK53_RS09945	0.71	-2.4
2,233,074	+		LRK53_RS09945	0.71	-1.3
2,233,074	+		LRK53_RS09945	0.71	-0.1
2,233,074	+		LRK53_RS09945	0.71	-0.5
2,233,074	+		LRK53_RS09945	0.71	-0.1
2,233,074	+		LRK53_RS09945	0.71	-1.6
2,233,075	-		LRK53_RS09945	0.71	-1.7
2,233,075	-		LRK53_RS09945	0.71	-2.8
2,233,075	-		LRK53_RS09945	0.71	+0.6
2,233,075	-		LRK53_RS09945	0.71	-2.4
2,233,075	-		LRK53_RS09945	0.71	-0.3
2,233,075	-		LRK53_RS09945	0.71	+0.1
2,233,075	-		LRK53_RS09945	0.71	-2.3
2,233,075	-		LRK53_RS09945	0.71	+0.6
2,233,113	+		LRK53_RS09945	0.73	+0.1
2,233,113	+		LRK53_RS09945	0.73	-0.6
2,233,113	+		LRK53_RS09945	0.73	-2.2
2,233,114	-		LRK53_RS09945	0.73	-2.0
2,233,201	+		LRK53_RS09945	0.78	-0.1
2,233,201	+		LRK53_RS09945	0.78	+1.1
2,233,202	-		LRK53_RS09945	0.78	+0.3
2,233,202	-		LRK53_RS09945	0.78	-0.6
2,233,202	-		LRK53_RS09945	0.78	-1.5
2,233,202	-		LRK53_RS09945	0.78	-2.5
2,233,337	+		LRK53_RS09945	0.86	-2.5
2,233,340	-		LRK53_RS09945	0.86	-0.1
2,233,340	-		LRK53_RS09945	0.86	-2.6
2,233,453	+				+1.1
2,233,453	+				-2.2
2,233,454	-				+0.0
2,233,482	+				-0.0
2,233,668	+		LRK53_RS09950	0.14	-0.5
2,233,668	+		LRK53_RS09950	0.14	-0.4
2,233,668	+		LRK53_RS09950	0.14	-1.9
2,233,668	+		LRK53_RS09950	0.14	+0.1
2,233,668	+		LRK53_RS09950	0.14	-2.3
2,233,668	+		LRK53_RS09950	0.14	-1.8
2,233,668	+		LRK53_RS09950	0.14	-1.0
2,233,669	-		LRK53_RS09950	0.14	-0.7
2,233,669	-		LRK53_RS09950	0.14	-1.6
2,233,669	-		LRK53_RS09950	0.14	-0.6
2,233,669	-		LRK53_RS09950	0.14	-0.6
2,233,669	-		LRK53_RS09950	0.14	-0.4
2,233,669	-		LRK53_RS09950	0.14	-2.2
2,233,669	-		LRK53_RS09950	0.14	+0.3
2,233,669	-		LRK53_RS09950	0.14	+0.7
2,233,844	+		LRK53_RS09950	0.53	-0.4
2,233,845	-		LRK53_RS09950	0.53	-1.1
2,233,845	-		LRK53_RS09950	0.53	-3.0
2,233,845	-		LRK53_RS09950	0.53	+0.1
2,233,845	-		LRK53_RS09950	0.53	-0.9
2,233,845	-		LRK53_RS09950	0.53	-0.5
2,233,845	-		LRK53_RS09950	0.53	+0.7
2,233,845	-		LRK53_RS09950	0.53	+0.1
2,233,845	-		LRK53_RS09950	0.53	-0.6
2,233,935	+		LRK53_RS09950	0.73	-0.3
2,233,935	+		LRK53_RS09950	0.73	-0.3
2,233,935	+		LRK53_RS09950	0.73	-0.9
2,233,935	+		LRK53_RS09950	0.73	-1.0
2,233,935	+		LRK53_RS09950	0.73	+2.7
2,233,936	-		LRK53_RS09950	0.73	-1.4
2,233,936	-		LRK53_RS09950	0.73	-2.4
2,233,936	-		LRK53_RS09950	0.73	-2.1
2,233,936	-		LRK53_RS09950	0.73	-1.2
2,233,936	-		LRK53_RS09950	0.73	-0.6
2,233,936	-		LRK53_RS09950	0.73	+0.3
2,233,992	+		LRK53_RS09950	0.85	-0.6
2,233,992	+		LRK53_RS09950	0.85	-1.5
2,233,992	+		LRK53_RS09950	0.85	-0.7
2,233,992	+		LRK53_RS09950	0.85	+0.4
2,233,992	+		LRK53_RS09950	0.85	+0.1
2,233,992	+		LRK53_RS09950	0.85	-1.3
2,233,993	-		LRK53_RS09950	0.85	-1.4
2,233,993	-		LRK53_RS09950	0.85	-2.7
2,233,995	+		LRK53_RS09950	0.86	-0.5
2,233,995	+		LRK53_RS09950	0.86	-0.9
2,233,995	+		LRK53_RS09950	0.86	-1.5
2,233,995	+		LRK53_RS09950	0.86	-1.4
2,233,996	+		LRK53_RS09950	0.86	-0.1
2,233,996	-		LRK53_RS09950	0.86	-1.7
2,234,005	+		LRK53_RS09950	0.88	-0.9
2,234,005	+		LRK53_RS09950	0.88	+0.1
2,234,006	-		LRK53_RS09950	0.88	-2.1
2,234,006	-		LRK53_RS09950	0.88	-0.7
2,234,167	+		LRK53_RS09955	0.70	-2.2
2,234,167	+		LRK53_RS09955	0.70	-0.4
2,234,167	+		LRK53_RS09955	0.70	+0.1
2,234,167	+		LRK53_RS09955	0.70	-1.9
2,234,168	-		LRK53_RS09955	0.70	-0.9
2,234,268	-				-1.9
2,234,276	+				-1.6
2,234,276	+				-0.9
2,234,276	+				-0.0
2,234,276	+				-1.8
2,234,276	+				-0.1
2,234,276	+				-0.6
2,234,276	+				-0.7
2,234,276	+				-0.3
2,234,276	+				-0.1
2,234,276	+				-1.3
2,234,276	+				+2.1
2,234,276	+				-2.0
2,234,276	+				-0.6
2,234,276	+				-1.5
2,234,277	-				-2.1
2,234,277	-				-1.0
2,234,277	-				+1.0
2,234,277	-				-0.6
2,234,277	-				-0.4
2,234,277	-				-1.4
2,234,277	-				+2.4
2,234,277	-				-2.3
2,234,277	-				-0.1
2,234,277	-				-1.0
2,234,277	-				-2.3
2,234,277	-				-1.3
2,234,277	-				+0.2
2,234,277	-				-1.0
2,234,277	-				+0.3
2,234,277	-				-3.3
2,234,277	-				-1.6
2,234,277	-				-3.4
2,234,277	-				-0.3
2,234,277	-				-0.3
2,234,277	-				+1.7
2,234,279	+				+1.1
2,234,280	-				-0.9
2,234,280	-				+1.8
2,234,280	-				-1.7
2,234,317	+				-2.7
2,234,317	+				-0.5
2,234,317	+				-1.3
2,234,317	+				-2.5
2,234,318	-				-0.1
2,234,318	-				-2.4
2,234,344	-				-1.3
2,234,726	+				-0.7
2,234,727	-				-0.4
2,234,778	+		LRK53_RS09960	0.13	+0.0
2,234,778	+		LRK53_RS09960	0.13	-0.3
2,234,778	+		LRK53_RS09960	0.13	-1.0
2,234,778	+		LRK53_RS09960	0.13	+0.4
2,234,778	+		LRK53_RS09960	0.13	-1.0
2,234,778	+		LRK53_RS09960	0.13	-3.3
2,234,778	+		LRK53_RS09960	0.13	+0.1
2,234,778	+		LRK53_RS09960	0.13	-0.9
2,234,778	+		LRK53_RS09960	0.13	-0.8
2,234,778	+		LRK53_RS09960	0.13	-0.1
2,234,778	+		LRK53_RS09960	0.13	-0.9
2,234,778	+		LRK53_RS09960	0.13	-3.2
2,234,779	-		LRK53_RS09960	0.13	-0.6
2,234,779	-		LRK53_RS09960	0.13	+0.6
2,234,779	-		LRK53_RS09960	0.13	+0.1
2,234,779	-		LRK53_RS09960	0.13	+0.4
2,234,779	-		LRK53_RS09960	0.13	+0.6
2,234,779	-		LRK53_RS09960	0.13	-1.3
2,234,779	-		LRK53_RS09960	0.13	-0.7
2,234,779	-		LRK53_RS09960	0.13	-1.1
2,234,779	-		LRK53_RS09960	0.13	+1.4
2,234,779	-		LRK53_RS09960	0.13	-0.6
2,234,779	-		LRK53_RS09960	0.13	-1.3
2,234,814	-		LRK53_RS09960	0.17	+0.7
2,234,854	-		LRK53_RS09960	0.22	-2.5
2,234,854	-		LRK53_RS09960	0.22	-0.4
2,234,854	-		LRK53_RS09960	0.22	-0.1
2,234,915	+		LRK53_RS09960	0.29	-1.0
2,234,916	-		LRK53_RS09960	0.29	-0.7
2,234,916	-		LRK53_RS09960	0.29	-2.1
2,234,916	-		LRK53_RS09960	0.29	+1.4
2,234,986	-		LRK53_RS09960	0.37	-0.0
2,234,986	-		LRK53_RS09960	0.37	-0.6
2,234,987	+		LRK53_RS09960	0.37	-1.8
2,234,987	+		LRK53_RS09960	0.37	-0.4
2,234,988	-		LRK53_RS09960	0.37	-1.6
2,234,988	-		LRK53_RS09960	0.37	-1.3
2,234,988	-		LRK53_RS09960	0.37	-2.7
2,234,988	-		LRK53_RS09960	0.37	+0.9
2,234,989	-		LRK53_RS09960	0.37	-0.9
2,235,005	+		LRK53_RS09960	0.39	-0.9
2,235,005	+		LRK53_RS09960	0.39	-0.0
2,235,005	+		LRK53_RS09960	0.39	-3.2