Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS08525

Experiment: biofilm; Day2; NLDM;

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	biofilm; Day2; NLDM;
1,911,951	+		LRK53_RS08520	0.56	-1.2
1,911,951	+		LRK53_RS08520	0.56	+0.5
1,911,951	+		LRK53_RS08520	0.56	-0.5
1,911,951	+		LRK53_RS08520	0.56	-4.5
1,911,951	+		LRK53_RS08520	0.56	-0.3
1,911,951	+		LRK53_RS08520	0.56	-0.3
1,911,952	-		LRK53_RS08520	0.56	-0.3
1,911,952	-		LRK53_RS08520	0.56	-2.4
1,911,979	+		LRK53_RS08520	0.58	+0.2
1,911,979	+		LRK53_RS08520	0.58	+0.7
1,912,044	+		LRK53_RS08520	0.62	+1.1
1,912,044	+		LRK53_RS08520	0.62	-1.8
1,912,044	+		LRK53_RS08520	0.62	-0.8
1,912,044	+		LRK53_RS08520	0.62	-2.5
1,912,044	+		LRK53_RS08520	0.62	+0.1
1,912,044	+		LRK53_RS08520	0.62	-0.3
1,912,044	+		LRK53_RS08520	0.62	-1.6
1,912,044	+		LRK53_RS08520	0.62	-0.7
1,912,044	+		LRK53_RS08520	0.62	+0.0
1,912,044	+		LRK53_RS08520	0.62	-1.4
1,912,044	+		LRK53_RS08520	0.62	-0.2
1,912,044	+		LRK53_RS08520	0.62	-0.9
1,912,044	+		LRK53_RS08520	0.62	-1.9
1,912,044	+		LRK53_RS08520	0.62	+0.2
1,912,045	-		LRK53_RS08520	0.62	-1.4
1,912,045	-		LRK53_RS08520	0.62	-1.0
1,912,045	-		LRK53_RS08520	0.62	-2.5
1,912,045	-		LRK53_RS08520	0.62	-1.8
1,912,045	-		LRK53_RS08520	0.62	-0.8
1,912,045	-		LRK53_RS08520	0.62	+0.7
1,912,045	-		LRK53_RS08520	0.62	-1.2
1,912,045	-		LRK53_RS08520	0.62	-0.1
1,912,045	-		LRK53_RS08520	0.62	-1.4
1,912,195	+		LRK53_RS08520	0.72	-1.0
1,912,195	+		LRK53_RS08520	0.72	-1.1
1,912,218	+		LRK53_RS08520	0.74	-1.0
1,912,218	+		LRK53_RS08520	0.74	+0.1
1,912,218	+		LRK53_RS08520	0.74	-1.4
1,912,219	-		LRK53_RS08520	0.74	-0.6
1,912,219	-		LRK53_RS08520	0.74	-0.6
1,912,219	-		LRK53_RS08520	0.74	-1.9
1,912,219	-		LRK53_RS08520	0.74	-0.3
1,912,260	+		LRK53_RS08520	0.77	+0.1
1,912,261	-		LRK53_RS08520	0.77	-0.8
1,912,261	-		LRK53_RS08520	0.77	-0.5
1,912,268	+		LRK53_RS08520	0.77	+0.1
1,912,269	-		LRK53_RS08520	0.77	+0.6
1,912,269	-		LRK53_RS08520	0.77	-1.6
1,912,269	-		LRK53_RS08520	0.77	+0.3
1,912,317	+		LRK53_RS08520	0.80	+1.2
1,912,317	+		LRK53_RS08520	0.80	-2.4
1,912,317	+		LRK53_RS08520	0.80	-1.6
1,912,318	-		LRK53_RS08520	0.81	-0.6
1,912,318	-		LRK53_RS08520	0.81	+1.2
1,912,318	-		LRK53_RS08520	0.81	-0.8
1,912,323	+		LRK53_RS08520	0.81	-2.3
1,912,323	+		LRK53_RS08520	0.81	-0.3
1,912,323	+		LRK53_RS08520	0.81	-0.9
1,912,324	-		LRK53_RS08520	0.81	+0.1
1,912,329	+		LRK53_RS08520	0.81	-1.1
1,912,329	+		LRK53_RS08520	0.81	-0.8
1,912,329	+		LRK53_RS08520	0.81	-2.6
1,912,330	-		LRK53_RS08520	0.81	+1.5
1,912,330	-		LRK53_RS08520	0.81	-1.3
1,912,330	-		LRK53_RS08520	0.81	-0.1
1,912,330	-		LRK53_RS08520	0.81	-0.8
1,912,330	-		LRK53_RS08520	0.81	-1.6
1,912,371	+		LRK53_RS08520	0.84	-0.8
1,912,371	+		LRK53_RS08520	0.84	+0.4
1,912,371	+		LRK53_RS08520	0.84	-0.4
1,912,371	+		LRK53_RS08520	0.84	-1.0
1,912,372	-		LRK53_RS08520	0.84	-0.8
1,912,544	-				+2.5
1,912,632	+				-0.8
1,912,632	+				-1.2
1,912,632	+				+0.0
1,912,632	+				-3.2
1,912,632	+				-1.6
1,912,632	+				-1.0
1,912,632	+				+1.2
1,912,632	+				-3.0
1,912,632	+				-1.3
1,912,632	+				-2.2
1,912,632	+				-0.2
1,912,632	+				+1.1
1,912,632	+				+0.4
1,912,632	+				-0.1
1,912,632	+				-0.0
1,912,632	+				-3.5
1,912,632	+				-0.1
1,912,632	+				-2.2
1,912,632	+				+0.8
1,912,632	+				-0.2
1,912,632	+				+0.2
1,912,632	+				+0.3
1,912,632	+				+0.5
1,912,632	+				-2.1
1,912,632	+				-0.3
1,912,632	+				+0.3
1,912,632	+				-2.0
1,912,632	+				-1.3
1,912,632	+				-0.8
1,912,632	+				-0.3
1,912,632	+				+0.5
1,912,633	-				-0.6
1,912,633	-				-2.1
1,912,633	-				-0.7
1,912,633	-				-1.2
1,912,633	-				-0.1
1,912,633	-				-1.8
1,912,633	-				+0.5
1,912,633	-				-0.9
1,912,633	-				-0.3
1,912,633	-				-0.3
1,912,633	-				-0.9
1,912,633	-				-1.5
1,912,633	-				-2.3
1,912,633	-				-1.3
1,912,633	-				-0.8
1,912,633	-				+0.2
1,912,633	-				-1.6
1,912,633	-				-2.5
1,912,633	-				-1.3
1,912,633	-				+0.1
1,912,633	-				-0.8
1,912,633	-				-0.9
1,912,633	-				-1.1
1,912,633	-				+0.7
1,912,633	-				+0.8
1,912,633	-				-1.6
1,912,633	-				-0.7
1,912,633	-				-0.1
1,912,633	-				-0.6
1,912,633	-				-1.5
1,912,633	-				-1.0
1,912,633	-				-2.0
1,912,633	-				-2.3
1,912,633	-				-0.3
1,912,634	+				-2.6
1,912,634	+				-1.2
1,912,634	+				-1.4
1,912,634	+				-1.2
1,912,634	+				+0.3
1,912,634	+				-1.0
1,912,634	+				-0.7
1,912,634	+				-0.1
1,912,634	+				-1.6
1,912,634	+				+1.3
1,912,635	-				-0.6
1,912,635	-				+0.4
1,912,635	-				-1.6
1,912,635	-				+0.5
1,912,635	-				-1.3
1,912,635	-				-2.4
1,912,708	+				+1.2
1,912,708	+				+1.1
1,912,883	+				-0.1
1,912,883	+				-3.1
1,912,883	+				+1.5
1,912,883	+				-2.3
1,912,883	+				-2.9
1,912,883	+				-1.0
1,912,883	+				-2.5
1,912,883	+				-1.6
1,912,883	+				-0.9
1,912,883	+				+0.6
1,912,883	+				-0.2
1,912,883	+				-3.9
1,912,883	+				-0.3
1,912,883	+				+0.5
1,912,883	+				-0.5
1,912,883	+				-1.0
1,912,883	+				-0.3
1,912,883	+				-1.7
1,912,883	+				-0.7
1,912,883	+				-1.3
1,912,883	+				-1.8
1,912,884	-				-2.6
1,912,884	-				+0.6
1,912,884	-				-1.2
1,912,884	-				+1.5
1,912,884	-				-1.4
1,912,884	-				+1.5
1,912,884	-				-0.3
1,912,884	-				-2.9
1,912,884	-				+0.4
1,912,925	-				-1.1
1,912,996	+				-1.5
1,912,996	+				-1.3
1,912,996	+				-1.1
1,912,997	-				-1.1
1,913,002	+				-0.6
1,913,002	+				-1.3
1,913,002	+				+0.7
1,913,002	+				-3.3
1,913,002	+				-1.7
1,913,002	+				-2.0
1,913,002	+				-1.6
1,913,002	+				-0.8
1,913,002	+				-0.5
1,913,002	+				-1.7
1,913,002	+				-0.0
1,913,002	+				-1.3
1,913,002	+				-0.1
1,913,002	+				+0.2
1,913,002	+				-1.8
1,913,002	+				-1.3
1,913,002	+				+0.3
1,913,002	+				-0.4
1,913,002	+				-0.9
1,913,003	-				-0.8
1,913,003	-				+0.3
1,913,003	-				+0.7
1,913,003	-				-0.6
1,913,003	-				-1.2
1,913,003	-				+0.5
1,913,003	-				-0.3
1,913,003	-				-1.1
1,913,003	-				-2.1
1,913,003	-				-3.1
1,913,003	-				-0.5
1,913,003	-				-1.3
1,913,003	-				-1.6
1,913,003	-				-4.1
1,913,003	-				+0.7
1,913,003	-				-1.3
1,913,003	-				-2.0
1,913,003	-				+0.4
1,913,005	+				-0.3
1,913,005	+				-1.2
1,913,005	+				+0.2
1,913,005	+				+0.0
1,913,005	+				-1.1
1,913,005	+				-0.1
1,913,005	+				-1.7
1,913,005	+				-1.3
1,913,005	+				+1.0
1,913,005	+				+0.2
1,913,005	+				-2.8
1,913,005	+				-0.0
1,913,005	+				-3.5
1,913,005	+				-1.3
1,913,005	+				-2.0
1,913,005	+				-1.4
1,913,005	+				-0.1
1,913,005	+				-2.1
1,913,006	-				-1.2
1,913,006	-				-3.0
1,913,006	-				-1.5
1,913,006	-				-1.4
1,913,006	-				-3.9
1,913,006	-				-1.7
1,913,006	-				-0.9
1,913,006	-				+0.9
1,913,006	-				-0.7
1,913,006	-				-2.8
1,913,006	-				+1.9
1,913,006	-				-0.8
1,913,006	-				-0.9
1,913,006	-				-0.8
1,913,006	-				-2.3
1,913,006	-				-0.4
1,913,283	+		LRK53_RS08525	0.22	-1.2
1,913,283	+		LRK53_RS08525	0.22	-1.5
1,913,283	+		LRK53_RS08525	0.22	-0.5
1,913,284	-		LRK53_RS08525	0.22	-0.8
1,913,284	-		LRK53_RS08525	0.22	+0.1
1,913,292	+		LRK53_RS08525	0.23	-2.9
1,913,292	+		LRK53_RS08525	0.23	+0.4
1,913,292	+		LRK53_RS08525	0.23	-0.7
1,913,292	+		LRK53_RS08525	0.23	-1.9
1,913,292	+		LRK53_RS08525	0.23	-0.2
1,913,292	+		LRK53_RS08525	0.23	-0.9
1,913,292	+		LRK53_RS08525	0.23	-0.5
1,913,292	+		LRK53_RS08525	0.23	-1.3
1,913,292	+		LRK53_RS08525	0.23	-0.3
1,913,292	+		LRK53_RS08525	0.23	-0.7
1,913,292	+		LRK53_RS08525	0.23	-1.0
1,913,292	+		LRK53_RS08525	0.23	-1.7
1,913,292	+		LRK53_RS08525	0.23	+0.1
1,913,292	+		LRK53_RS08525	0.23	+0.9
1,913,292	+		LRK53_RS08525	0.23	+0.2
1,913,292	+		LRK53_RS08525	0.23	-0.8
1,913,292	+		LRK53_RS08525	0.23	-3.1
1,913,292	+		LRK53_RS08525	0.23	-0.9
1,913,292	+		LRK53_RS08525	0.23	-2.4
1,913,293	-		LRK53_RS08525	0.23	-0.8
1,913,293	-		LRK53_RS08525	0.23	-1.2
1,913,293	-		LRK53_RS08525	0.23	-0.7
1,913,293	-		LRK53_RS08525	0.23	-2.5
1,913,293	-		LRK53_RS08525	0.23	-0.8
1,913,293	-		LRK53_RS08525	0.23	-0.8
1,913,293	-		LRK53_RS08525	0.23	-0.5
1,913,293	-		LRK53_RS08525	0.23	-0.8
1,913,293	-		LRK53_RS08525	0.23	-1.3
1,913,293	-		LRK53_RS08525	0.23	-0.9
1,913,293	-		LRK53_RS08525	0.23	-2.3
1,913,293	-		LRK53_RS08525	0.23	-0.8
1,913,293	-		LRK53_RS08525	0.23	-2.3
1,913,293	-		LRK53_RS08525	0.23	-1.1
1,913,293	-		LRK53_RS08525	0.23	-0.4
1,913,293	-		LRK53_RS08525	0.23	-0.4
1,913,293	-		LRK53_RS08525	0.23	+1.5
1,913,293	-		LRK53_RS08525	0.23	-2.1
1,913,293	-		LRK53_RS08525	0.23	-1.6
1,913,293	-		LRK53_RS08525	0.23	-1.5
1,913,293	-		LRK53_RS08525	0.23	-1.4
1,913,293	-		LRK53_RS08525	0.23	+0.7
1,913,386	+		LRK53_RS08525	0.29	-2.1
1,913,386	+		LRK53_RS08525	0.29	-1.2
1,913,386	+		LRK53_RS08525	0.29	-1.6
1,913,386	+		LRK53_RS08525	0.29	-1.5
1,913,386	+		LRK53_RS08525	0.29	-0.7
1,913,386	+		LRK53_RS08525	0.29	-1.2
1,913,386	+		LRK53_RS08525	0.29	-0.6
1,913,387	-		LRK53_RS08525	0.29	-0.5
1,913,387	-		LRK53_RS08525	0.29	-0.4
1,913,387	-		LRK53_RS08525	0.29	-1.8
1,913,387	-		LRK53_RS08525	0.29	-4.5
1,913,387	-		LRK53_RS08525	0.29	+0.1
1,913,387	-		LRK53_RS08525	0.29	-2.6
1,913,387	-		LRK53_RS08525	0.29	-1.2
1,913,387	-		LRK53_RS08525	0.29	-1.0
1,913,451	-		LRK53_RS08525	0.34	-0.7
1,913,451	-		LRK53_RS08525	0.34	-0.3
1,913,458	+		LRK53_RS08525	0.34	+0.1
1,913,458	+		LRK53_RS08525	0.34	-1.8
1,913,459	-		LRK53_RS08525	0.34	-0.7
1,913,459	-		LRK53_RS08525	0.34	-1.3
1,913,614	+		LRK53_RS08525	0.45	+0.1
1,913,614	+		LRK53_RS08525	0.45	-1.5
1,913,614	+		LRK53_RS08525	0.45	-1.5
1,913,614	+		LRK53_RS08525	0.45	-0.1
1,913,614	+		LRK53_RS08525	0.45	+1.8
1,913,614	+		LRK53_RS08525	0.45	-0.3
1,913,614	+		LRK53_RS08525	0.45	+0.5
1,913,614	+		LRK53_RS08525	0.45	-0.1
1,913,614	+		LRK53_RS08525	0.45	-1.1
1,913,615	-		LRK53_RS08525	0.45	-1.2
1,913,615	-		LRK53_RS08525	0.45	-2.4
1,913,615	-		LRK53_RS08525	0.45	+0.3
1,913,615	-		LRK53_RS08525	0.45	-1.5
1,913,615	-		LRK53_RS08525	0.45	-1.2
1,913,615	-		LRK53_RS08525	0.45	-1.0
1,913,615	-		LRK53_RS08525	0.45	-1.2
1,913,615	-		LRK53_RS08525	0.45	-0.6
1,913,615	-		LRK53_RS08525	0.45	-1.9
1,913,615	-		LRK53_RS08525	0.45	-1.1
1,913,629	+		LRK53_RS08525	0.46	-0.4
1,913,629	+		LRK53_RS08525	0.46	-3.3
1,913,629	+		LRK53_RS08525	0.46	-1.5
1,913,629	+		LRK53_RS08525	0.46	-2.1
1,913,629	+		LRK53_RS08525	0.46	-1.3
1,913,629	+		LRK53_RS08525	0.46	-0.1
1,913,629	+		LRK53_RS08525	0.46	-2.1
1,913,629	+		LRK53_RS08525	0.46	-2.7
1,913,629	+		LRK53_RS08525	0.46	-0.6
1,913,629	+		LRK53_RS08525	0.46	+1.5
1,913,629	+		LRK53_RS08525	0.46	-2.0
1,913,629	+		LRK53_RS08525	0.46	-1.2
1,913,630	-		LRK53_RS08525	0.46	-1.2
1,913,630	-		LRK53_RS08525	0.46	-0.1
1,913,630	-		LRK53_RS08525	0.46	-0.0
1,913,630	-		LRK53_RS08525	0.46	+0.9
1,913,630	-		LRK53_RS08525	0.46	-2.0
1,913,630	-		LRK53_RS08525	0.46	-0.4
1,913,630	-		LRK53_RS08525	0.46	-0.5
1,913,630	-		LRK53_RS08525	0.46	-0.4
1,913,630	-		LRK53_RS08525	0.46	-1.7
1,913,630	-		LRK53_RS08525	0.46	-1.5
1,913,630	-		LRK53_RS08525	0.46	-1.2
1,913,630	-		LRK53_RS08525	0.46	-2.3
1,913,630	-		LRK53_RS08525	0.46	-1.4
1,913,630	-		LRK53_RS08525	0.46	-1.8
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1,913,632	+		LRK53_RS08525	0.46	-2.1
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1,913,633	-		LRK53_RS08525	0.46	-1.1
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1,913,633	-		LRK53_RS08525	0.46	-2.6
1,913,633	-		LRK53_RS08525	0.46	-0.5
1,913,633	-		LRK53_RS08525	0.46	+0.3
1,913,633	-		LRK53_RS08525	0.46	-2.7
1,913,734	+		LRK53_RS08525	0.53	-1.3
1,913,734	+		LRK53_RS08525	0.53	+1.1
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1,913,892	+		LRK53_RS08525	0.63	-3.0
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1,913,892	+		LRK53_RS08525	0.63	-1.1
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1,913,893	-		LRK53_RS08525	0.64	-2.1
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1,914,000	+		LRK53_RS08525	0.71	-2.5
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1,914,038	+		LRK53_RS08525	0.73	-4.2
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1,914,039	-		LRK53_RS08525	0.73	-1.2
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1,914,039	-		LRK53_RS08525	0.73	-1.1
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1,914,055	+		LRK53_RS08525	0.74	-1.3
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1,914,056	-		LRK53_RS08525	0.74	-0.8
1,914,097	+		LRK53_RS08525	0.77	-3.0
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1,914,097	+		LRK53_RS08525	0.77	-1.4
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1,914,097	+		LRK53_RS08525	0.77	-3.4
1,914,097	+		LRK53_RS08525	0.77	-1.3
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1,914,097	+		LRK53_RS08525	0.77	-1.8
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1,914,098	-		LRK53_RS08525	0.77	-2.2
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1,914,098	-		LRK53_RS08525	0.77	-0.9
1,914,098	-		LRK53_RS08525	0.77	-2.1
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1,914,098	-		LRK53_RS08525	0.77	-1.3
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1,914,098	-		LRK53_RS08525	0.77	-3.7
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1,914,098	-		LRK53_RS08525	0.77	-1.9
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1,914,154	+		LRK53_RS08525	0.81	-0.3
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1,914,154	+		LRK53_RS08525	0.81	-2.0
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1,914,155	-		LRK53_RS08525	0.81	-1.9
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1,914,155	-		LRK53_RS08525	0.81	-2.1
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1,914,155	-		LRK53_RS08525	0.81	-2.1
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1,914,155	-		LRK53_RS08525	0.81	-0.8
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1,914,160	+		LRK53_RS08525	0.81	-1.2
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1,914,160	+		LRK53_RS08525	0.81	-1.0
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1,914,160	+		LRK53_RS08525	0.81	-1.1
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1,914,160	+		LRK53_RS08525	0.81	-3.1
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1,914,160	+		LRK53_RS08525	0.81	-1.2
1,914,160	+		LRK53_RS08525	0.81	-1.1
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1,914,160	+		LRK53_RS08525	0.81	-0.3
1,914,160	+		LRK53_RS08525	0.81	-1.1
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1,914,161	-		LRK53_RS08525	0.82	-1.0
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1,914,161	-		LRK53_RS08525	0.82	-1.1
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1,914,161	-		LRK53_RS08525	0.82	-1.6
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1,914,161	-		LRK53_RS08525	0.82	-2.0
1,914,161	-		LRK53_RS08525	0.82	-1.1
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1,914,161	-		LRK53_RS08525	0.82	-1.1
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1,914,161	-		LRK53_RS08525	0.82	-1.0
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1,914,161	-		LRK53_RS08525	0.82	-1.0
1,914,161	-		LRK53_RS08525	0.82	-2.1
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1,914,161	-		LRK53_RS08525	0.82	-2.1
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1,914,161	-		LRK53_RS08525	0.82	-1.4
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1,914,167	-		LRK53_RS08525	0.82	-1.1
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1,914,167	-		LRK53_RS08525	0.82	-1.3
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1,914,544	+				+0.7
1,914,544	+				-2.6
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1,914,544	+				-1.5
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1,914,987	+		LRK53_RS08530	0.70	-1.1
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1,914,987	+		LRK53_RS08530	0.70	-1.1
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1,915,175	+				-1.4
1,915,175	+				-1.6
1,915,175	+				-2.8
1,915,176	-				+0.0
1,915,176	-				+0.6
1,915,176	-				+0.5
1,915,176	-				+0.0
1,915,176	-				-0.8
1,915,176	-				-0.2
1,915,212	+				-1.2
1,915,233	+				+0.6
1,915,234	-				-1.9
1,915,239	+				-0.4
1,915,239	+				-1.1
1,915,239	+				-1.6
1,915,239	+				-1.3
1,915,240	-				-0.8
1,915,240	-				-1.0
1,915,240	-				-1.4
1,915,240	-				+0.5
1,915,240	-				+0.7
1,915,240	-				-0.1
1,915,302	+		LRK53_RS08535	0.13	+0.1
1,915,302	+		LRK53_RS08535	0.13	-0.7
1,915,302	+		LRK53_RS08535	0.13	-1.2
1,915,302	+		LRK53_RS08535	0.13	+0.0
1,915,303	-		LRK53_RS08535	0.14	-0.8
1,915,303	-		LRK53_RS08535	0.14	-0.0
1,915,303	-		LRK53_RS08535	0.14	-0.8
1,915,303	-		LRK53_RS08535	0.14	-0.2
1,915,356	+		LRK53_RS08535	0.24	-1.6
1,915,356	+		LRK53_RS08535	0.24	-1.5
1,915,356	+		LRK53_RS08535	0.24	-1.4
1,915,356	+		LRK53_RS08535	0.24	+0.3
1,915,356	+		LRK53_RS08535	0.24	+0.7
1,915,356	+		LRK53_RS08535	0.24	-0.8
1,915,357	-		LRK53_RS08535	0.24	-0.2
1,915,357	-		LRK53_RS08535	0.24	-1.3
1,915,357	-		LRK53_RS08535	0.24	-1.0
1,915,357	-		LRK53_RS08535	0.24	+0.3
1,915,357	-		LRK53_RS08535	0.24	-1.4
1,915,357	-		LRK53_RS08535	0.24	-1.5
1,915,365	+		LRK53_RS08535	0.25	-1.4
1,915,365	+		LRK53_RS08535	0.25	-1.3
1,915,365	+		LRK53_RS08535	0.25	-0.7
1,915,366	-		LRK53_RS08535	0.26	-1.3