Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS08060

Experiment: biofilm; Day2; NLDM;

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	biofilm; Day2; NLDM;
1,808,660	-		LRK53_RS08055	0.43	+0.7
1,808,661	+		LRK53_RS08055	0.43	-0.8
1,808,661	+		LRK53_RS08055	0.43	-0.1
1,808,661	+		LRK53_RS08055	0.43	-0.5
1,808,661	+		LRK53_RS08055	0.43	+0.7
1,808,661	+		LRK53_RS08055	0.43	-0.2
1,808,661	+		LRK53_RS08055	0.43	-2.4
1,808,661	+		LRK53_RS08055	0.43	-0.6
1,808,661	+		LRK53_RS08055	0.43	-1.2
1,808,661	+		LRK53_RS08055	0.43	-1.0
1,808,661	+		LRK53_RS08055	0.43	-1.5
1,808,661	+		LRK53_RS08055	0.43	-0.5
1,808,661	+		LRK53_RS08055	0.43	-1.3
1,808,661	+		LRK53_RS08055	0.43	-0.6
1,808,661	+		LRK53_RS08055	0.43	-1.6
1,808,661	+		LRK53_RS08055	0.43	-0.1
1,808,661	+		LRK53_RS08055	0.43	-1.5
1,808,661	+		LRK53_RS08055	0.43	+1.9
1,808,661	+		LRK53_RS08055	0.43	+0.4
1,808,661	+		LRK53_RS08055	0.43	-0.5
1,808,662	-		LRK53_RS08055	0.43	+0.6
1,808,662	-		LRK53_RS08055	0.43	+0.4
1,808,662	-		LRK53_RS08055	0.43	-2.1
1,808,662	-		LRK53_RS08055	0.43	-0.7
1,808,662	-		LRK53_RS08055	0.43	-0.3
1,808,662	-		LRK53_RS08055	0.43	-0.3
1,808,662	-		LRK53_RS08055	0.43	-0.5
1,808,662	-		LRK53_RS08055	0.43	-3.1
1,808,662	-		LRK53_RS08055	0.43	-0.5
1,808,662	-		LRK53_RS08055	0.43	-1.9
1,808,662	-		LRK53_RS08055	0.43	+0.2
1,808,662	-		LRK53_RS08055	0.43	-0.3
1,808,662	-		LRK53_RS08055	0.43	+0.1
1,808,662	-		LRK53_RS08055	0.43	-1.7
1,808,662	-		LRK53_RS08055	0.43	-0.7
1,808,662	-		LRK53_RS08055	0.43	-0.6
1,808,662	-		LRK53_RS08055	0.43	+0.8
1,808,662	-		LRK53_RS08055	0.43	-0.1
1,808,662	-		LRK53_RS08055	0.43	-1.6
1,808,662	-		LRK53_RS08055	0.43	-1.8
1,808,665	+		LRK53_RS08055	0.43	-3.3
1,808,665	+		LRK53_RS08055	0.43	+1.8
1,808,665	+		LRK53_RS08055	0.43	-0.1
1,808,665	+		LRK53_RS08055	0.43	-0.6
1,808,665	+		LRK53_RS08055	0.43	-1.2
1,808,665	+		LRK53_RS08055	0.43	+0.8
1,808,665	+		LRK53_RS08055	0.43	-1.9
1,808,665	+		LRK53_RS08055	0.43	-0.3
1,808,665	+		LRK53_RS08055	0.43	-0.2
1,808,665	+		LRK53_RS08055	0.43	-0.5
1,808,665	+		LRK53_RS08055	0.43	+0.7
1,808,665	+		LRK53_RS08055	0.43	-0.6
1,808,665	+		LRK53_RS08055	0.43	+0.6
1,808,665	+		LRK53_RS08055	0.43	-0.1
1,808,665	+		LRK53_RS08055	0.43	-0.8
1,808,665	+		LRK53_RS08055	0.43	-0.5
1,808,665	+		LRK53_RS08055	0.43	-1.1
1,808,665	+		LRK53_RS08055	0.43	+0.4
1,808,665	+		LRK53_RS08055	0.43	-2.1
1,808,665	+		LRK53_RS08055	0.43	-1.1
1,808,665	+		LRK53_RS08055	0.43	-0.3
1,808,665	+		LRK53_RS08055	0.43	-0.8
1,808,665	+		LRK53_RS08055	0.43	-1.2
1,808,665	+		LRK53_RS08055	0.43	-0.6
1,808,665	+		LRK53_RS08055	0.43	+0.5
1,808,665	+		LRK53_RS08055	0.43	-1.9
1,808,665	+		LRK53_RS08055	0.43	-1.1
1,808,665	+		LRK53_RS08055	0.43	+1.7
1,808,665	+		LRK53_RS08055	0.43	+0.2
1,808,665	+		LRK53_RS08055	0.43	-0.0
1,808,665	+		LRK53_RS08055	0.43	-1.8
1,808,665	+		LRK53_RS08055	0.43	-1.8
1,808,665	+		LRK53_RS08055	0.43	+0.4
1,808,665	+		LRK53_RS08055	0.43	-0.6
1,808,665	+		LRK53_RS08055	0.43	-0.3
1,808,665	+		LRK53_RS08055	0.43	+1.5
1,808,665	+		LRK53_RS08055	0.43	+0.0
1,808,665	+		LRK53_RS08055	0.43	-1.1
1,808,665	+		LRK53_RS08055	0.43	+0.4
1,808,665	+		LRK53_RS08055	0.43	-1.6
1,808,665	+		LRK53_RS08055	0.43	+0.9
1,808,665	+		LRK53_RS08055	0.43	-1.5
1,808,666	-		LRK53_RS08055	0.43	-1.4
1,808,666	-		LRK53_RS08055	0.43	-2.9
1,808,666	-		LRK53_RS08055	0.43	-2.3
1,808,666	-		LRK53_RS08055	0.43	-0.4
1,808,666	-		LRK53_RS08055	0.43	+0.4
1,808,666	-		LRK53_RS08055	0.43	-1.4
1,808,666	-		LRK53_RS08055	0.43	-1.0
1,808,666	-		LRK53_RS08055	0.43	-1.6
1,808,666	-		LRK53_RS08055	0.43	-2.2
1,808,666	-		LRK53_RS08055	0.43	-0.6
1,808,666	-		LRK53_RS08055	0.43	-1.2
1,808,666	-		LRK53_RS08055	0.43	-1.2
1,808,666	-		LRK53_RS08055	0.43	-0.8
1,808,666	-		LRK53_RS08055	0.43	-0.3
1,808,666	-		LRK53_RS08055	0.43	-0.2
1,808,666	-		LRK53_RS08055	0.43	-2.5
1,808,666	-		LRK53_RS08055	0.43	+1.1
1,808,666	-		LRK53_RS08055	0.43	-0.1
1,808,666	-		LRK53_RS08055	0.43	+0.3
1,808,666	-		LRK53_RS08055	0.43	+0.9
1,808,666	-		LRK53_RS08055	0.43	-0.5
1,808,666	-		LRK53_RS08055	0.43	-0.8
1,808,666	-		LRK53_RS08055	0.43	-0.5
1,808,666	-		LRK53_RS08055	0.43	-1.4
1,808,666	-		LRK53_RS08055	0.43	-2.3
1,808,666	-		LRK53_RS08055	0.43	-0.3
1,808,666	-		LRK53_RS08055	0.43	-3.3
1,808,666	-		LRK53_RS08055	0.43	-2.8
1,808,666	-		LRK53_RS08055	0.43	-0.7
1,808,666	-		LRK53_RS08055	0.43	+0.2
1,808,666	-		LRK53_RS08055	0.43	+1.2
1,808,666	-		LRK53_RS08055	0.43	+0.1
1,808,666	-		LRK53_RS08055	0.43	-0.3
1,808,666	-		LRK53_RS08055	0.43	-1.4
1,808,666	-		LRK53_RS08055	0.43	-1.9
1,808,666	-		LRK53_RS08055	0.43	-0.6
1,808,666	-		LRK53_RS08055	0.43	+1.4
1,808,666	-		LRK53_RS08055	0.43	-0.4
1,808,666	-		LRK53_RS08055	0.43	+1.3
1,808,666	-		LRK53_RS08055	0.43	-1.7
1,808,667	+		LRK53_RS08055	0.43	+0.1
1,808,667	+		LRK53_RS08055	0.43	-2.5
1,808,667	+		LRK53_RS08055	0.43	-1.8
1,808,667	+		LRK53_RS08055	0.43	+2.1
1,808,667	+		LRK53_RS08055	0.43	-2.0
1,808,667	+		LRK53_RS08055	0.43	-0.1
1,808,667	+		LRK53_RS08055	0.43	-0.3
1,808,667	+		LRK53_RS08055	0.43	-1.7
1,808,667	+		LRK53_RS08055	0.43	-3.0
1,808,667	+		LRK53_RS08055	0.43	-0.3
1,808,667	+		LRK53_RS08055	0.43	-2.5
1,808,667	+		LRK53_RS08055	0.43	-0.7
1,808,667	+		LRK53_RS08055	0.43	-1.5
1,808,667	+		LRK53_RS08055	0.43	-1.7
1,808,668	-		LRK53_RS08055	0.43	+1.0
1,808,668	-		LRK53_RS08055	0.43	-1.5
1,808,668	-		LRK53_RS08055	0.43	-1.1
1,808,668	-		LRK53_RS08055	0.43	-0.6
1,808,668	-		LRK53_RS08055	0.43	-0.5
1,808,668	-		LRK53_RS08055	0.43	-0.9
1,808,668	-		LRK53_RS08055	0.43	-1.6
1,808,668	-		LRK53_RS08055	0.43	-0.6
1,808,668	-		LRK53_RS08055	0.43	+0.0
1,808,668	-		LRK53_RS08055	0.43	-1.9
1,808,668	-		LRK53_RS08055	0.43	-1.7
1,808,668	-		LRK53_RS08055	0.43	-0.5
1,808,668	-		LRK53_RS08055	0.43	-1.1
1,808,668	-		LRK53_RS08055	0.43	+0.4
1,808,668	-		LRK53_RS08055	0.43	-0.2
1,808,668	-		LRK53_RS08055	0.43	-1.7
1,808,668	-		LRK53_RS08055	0.43	-2.0
1,808,671	+		LRK53_RS08055	0.44	-0.6
1,808,671	+		LRK53_RS08055	0.44	+0.6
1,808,671	+		LRK53_RS08055	0.44	-0.9
1,808,671	+		LRK53_RS08055	0.44	+0.1
1,808,671	+		LRK53_RS08055	0.44	-1.0
1,808,672	-		LRK53_RS08055	0.44	+1.5
1,808,672	-		LRK53_RS08055	0.44	-0.3
1,808,672	-		LRK53_RS08055	0.44	-0.3
1,808,672	-		LRK53_RS08055	0.44	-0.6
1,808,672	-		LRK53_RS08055	0.44	-3.0
1,808,672	-		LRK53_RS08055	0.44	+1.4
1,808,672	-		LRK53_RS08055	0.44	-2.3
1,808,672	-		LRK53_RS08055	0.44	-2.7
1,808,672	-		LRK53_RS08055	0.44	-1.4
1,808,672	-		LRK53_RS08055	0.44	+1.7
1,808,831	+		LRK53_RS08055	0.53	+0.9
1,808,831	+		LRK53_RS08055	0.53	-1.0
1,808,831	+		LRK53_RS08055	0.53	+0.4
1,808,831	+		LRK53_RS08055	0.53	-1.1
1,808,831	+		LRK53_RS08055	0.53	-0.6
1,808,831	+		LRK53_RS08055	0.53	-0.6
1,808,831	+		LRK53_RS08055	0.53	-0.8
1,808,831	+		LRK53_RS08055	0.53	-0.3
1,808,831	+		LRK53_RS08055	0.53	-0.6
1,808,831	+		LRK53_RS08055	0.53	-2.7
1,808,831	+		LRK53_RS08055	0.53	-0.9
1,808,831	+		LRK53_RS08055	0.53	-0.6
1,808,831	+		LRK53_RS08055	0.53	+0.8
1,808,831	+		LRK53_RS08055	0.53	+0.9
1,808,832	-		LRK53_RS08055	0.53	-0.6
1,808,832	-		LRK53_RS08055	0.53	-1.9
1,808,832	-		LRK53_RS08055	0.53	-1.2
1,808,832	-		LRK53_RS08055	0.53	+0.6
1,808,832	-		LRK53_RS08055	0.53	-0.2
1,808,832	-		LRK53_RS08055	0.53	-0.6
1,808,832	-		LRK53_RS08055	0.53	-1.5
1,808,832	-		LRK53_RS08055	0.53	-0.3
1,808,832	-		LRK53_RS08055	0.53	+0.6
1,808,832	-		LRK53_RS08055	0.53	+0.5
1,808,832	-		LRK53_RS08055	0.53	-0.5
1,808,832	-		LRK53_RS08055	0.53	-1.5
1,808,832	-		LRK53_RS08055	0.53	-0.3
1,808,832	-		LRK53_RS08055	0.53	-0.6
1,808,878	+		LRK53_RS08055	0.55	-0.9
1,808,879	-		LRK53_RS08055	0.55	+0.8
1,808,879	-		LRK53_RS08055	0.55	-0.2
1,808,914	+		LRK53_RS08055	0.57	-2.5
1,808,914	+		LRK53_RS08055	0.57	-1.7
1,808,914	+		LRK53_RS08055	0.57	-0.5
1,808,914	+		LRK53_RS08055	0.57	-1.5
1,808,914	+		LRK53_RS08055	0.57	-1.4
1,808,915	-		LRK53_RS08055	0.57	-2.2
1,808,915	-		LRK53_RS08055	0.57	-0.2
1,808,915	-		LRK53_RS08055	0.57	+0.4
1,808,915	-		LRK53_RS08055	0.57	-2.2
1,809,170	-		LRK53_RS08055	0.72	-2.0
1,809,265	+		LRK53_RS08055	0.77	-0.1
1,809,265	+		LRK53_RS08055	0.77	-1.7
1,809,265	+		LRK53_RS08055	0.77	+0.9
1,809,265	+		LRK53_RS08055	0.77	+1.2
1,809,265	+		LRK53_RS08055	0.77	-2.1
1,809,265	+		LRK53_RS08055	0.77	-0.8
1,809,265	+		LRK53_RS08055	0.77	-1.1
1,809,266	-		LRK53_RS08055	0.77	-0.6
1,809,266	-		LRK53_RS08055	0.77	-0.6
1,809,266	-		LRK53_RS08055	0.77	-0.3
1,809,266	-		LRK53_RS08055	0.77	-1.5
1,809,266	-		LRK53_RS08055	0.77	-1.1
1,809,266	-		LRK53_RS08055	0.77	-0.2
1,809,266	-		LRK53_RS08055	0.77	-2.2
1,809,266	-		LRK53_RS08055	0.77	-0.8
1,809,266	-		LRK53_RS08055	0.77	+1.3
1,809,266	-		LRK53_RS08055	0.77	-1.7
1,809,382	+		LRK53_RS08055	0.84	-1.6
1,809,382	+		LRK53_RS08055	0.84	-1.3
1,809,382	+		LRK53_RS08055	0.84	+1.5
1,809,383	-		LRK53_RS08055	0.84	-1.2
1,809,383	-		LRK53_RS08055	0.84	-0.5
1,809,565	+				-0.5
1,809,565	+				-0.8
1,809,620	-				-0.8
1,809,620	-				-0.5
1,809,620	-				-1.0
1,809,620	-				+1.6
1,809,620	-				-0.2
1,809,620	-				-1.3
1,809,620	-				-1.5
1,809,620	-				-2.4
1,809,620	-				-0.5
1,809,620	-				+0.5
1,809,620	-				-2.1
1,809,620	-				-2.1
1,809,620	-				-0.8
1,809,620	-				-0.8
1,809,665	+				+0.5
1,809,665	+				+0.8
1,809,665	+				-1.2
1,809,665	+				-0.3
1,809,666	-				-1.9
1,809,666	-				-1.0
1,809,666	-				-2.0
1,809,666	-				-0.6
1,809,666	-				-3.8
1,810,218	+		LRK53_RS08060	0.45	+0.6
1,810,218	+		LRK53_RS08060	0.45	+0.5
1,810,359	+		LRK53_RS08060	0.56	-0.2
1,810,475	+		LRK53_RS08060	0.66	-1.9
1,810,475	+		LRK53_RS08060	0.66	-0.2
1,810,476	-		LRK53_RS08060	0.66	-1.0
1,810,476	-		LRK53_RS08060	0.66	-1.9
1,810,476	-		LRK53_RS08060	0.66	-1.6
1,810,584	+		LRK53_RS08060	0.75	-0.8
1,810,585	-		LRK53_RS08060	0.75	-1.6
1,810,585	-		LRK53_RS08060	0.75	-0.0
1,810,585	-		LRK53_RS08060	0.75	+1.0
1,810,629	+		LRK53_RS08060	0.78	-1.7
1,810,630	-		LRK53_RS08060	0.78	+0.5
1,810,630	-		LRK53_RS08060	0.78	-1.6
1,810,686	+		LRK53_RS08060	0.83	-1.3
1,810,759	-		LRK53_RS08060	0.89	-0.9
1,810,765	+		LRK53_RS08060	0.89	-0.7
1,810,765	+		LRK53_RS08060	0.89	-0.3
1,810,765	+		LRK53_RS08060	0.89	-1.0
1,810,765	+		LRK53_RS08060	0.89	+0.2
1,810,765	+		LRK53_RS08060	0.89	-1.9
1,810,765	+		LRK53_RS08060	0.89	-1.4
1,810,765	+		LRK53_RS08060	0.89	-1.0
1,810,766	-		LRK53_RS08060	0.89	-2.6
1,810,766	-		LRK53_RS08060	0.89	-1.9
1,810,766	-		LRK53_RS08060	0.89	-0.8
1,810,766	-		LRK53_RS08060	0.89	-2.1
1,810,785	+				+0.6
1,810,785	+				+1.4
1,810,785	+				-0.0
1,810,785	+				-2.7
1,810,785	+				-1.6
1,810,785	+				-0.4
1,810,785	+				-0.0
1,810,786	-				-2.7
1,810,786	-				-1.1
1,810,786	-				-0.0
1,810,786	-				-1.7
1,810,786	-				-1.3
1,810,795	+				-1.2
1,810,796	-				-0.8
1,810,989	+				-0.5
1,811,206	-		LRK53_RS08065	0.27	+0.7
1,811,382	+		LRK53_RS08065	0.43	-1.0
1,811,382	+		LRK53_RS08065	0.43	-1.3
1,811,382	+		LRK53_RS08065	0.43	-0.8
1,811,382	+		LRK53_RS08065	0.43	+0.2
1,811,383	-		LRK53_RS08065	0.43	-0.1
1,811,383	-		LRK53_RS08065	0.43	+0.3
1,811,383	-		LRK53_RS08065	0.43	-1.2
1,811,754	+		LRK53_RS08065	0.77	-0.4
1,811,754	+		LRK53_RS08065	0.77	-1.0
1,811,754	+		LRK53_RS08065	0.77	-0.9
1,811,754	+		LRK53_RS08065	0.77	+1.3
1,811,754	+		LRK53_RS08065	0.77	-2.3
1,811,754	+		LRK53_RS08065	0.77	+0.6
1,811,754	+		LRK53_RS08065	0.77	-0.8
1,811,755	-		LRK53_RS08065	0.78	-0.9
1,811,755	-		LRK53_RS08065	0.78	-2.0
1,811,755	-		LRK53_RS08065	0.78	+0.6
1,811,755	-		LRK53_RS08065	0.78	-0.9
1,811,755	-		LRK53_RS08065	0.78	+0.9
1,811,755	-		LRK53_RS08065	0.78	-0.7
1,811,755	-		LRK53_RS08065	0.78	+1.3