Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS07205

Experiment: biofilm; Day2; NLDM;

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	biofilm; Day2; NLDM;
1,620,452	-		LRK53_RS07190	0.82	+0.2
1,620,452	-		LRK53_RS07190	0.82	-1.9
1,620,641	-				-1.3
1,621,109	+				-1.4
1,621,109	+				+0.2
1,621,109	+				+1.7
1,621,109	+				-3.0
1,621,194	+		LRK53_RS07200	0.20	+0.8
1,621,195	-		LRK53_RS07200	0.21	-1.7
1,621,262	+		LRK53_RS07200	0.43	-0.6
1,621,263	-		LRK53_RS07200	0.43	-0.5
1,621,263	-		LRK53_RS07200	0.43	-1.3
1,621,263	-		LRK53_RS07200	0.43	-0.5
1,621,263	-		LRK53_RS07200	0.43	-0.1
1,621,372	-		LRK53_RS07200	0.80	-1.6
1,621,372	-		LRK53_RS07200	0.80	+0.7
1,621,438	+				+0.0
1,621,478	-				+0.3
1,621,483	+				-1.6
1,621,483	+				-3.0
1,621,483	+				-0.8
1,621,483	+				-0.9
1,621,484	-				-1.4
1,621,486	+				-0.1
1,621,486	+				-1.9
1,621,486	+				-0.6
1,621,486	+				-0.9
1,621,486	+				-1.1
1,621,486	+				+1.2
1,621,486	+				-1.5
1,621,487	-				-1.0
1,621,487	-				+0.7
1,621,487	-				+0.9
1,621,487	-				-1.3
1,621,495	+				-0.2
1,621,495	+				-0.1
1,621,495	+				-1.2
1,621,518	+				-1.4
1,621,519	+				-0.6
1,621,519	+				+0.2
1,621,519	+				+1.4
1,621,519	+				+0.2
1,621,519	+				-1.9
1,621,519	+				+0.1
1,621,519	+				-1.6
1,621,520	-				-0.9
1,621,520	-				+0.5
1,621,520	-				+0.4
1,621,520	-				-1.3
1,621,520	-				-0.9
1,621,520	-				-0.3
1,621,520	-				+0.1
1,621,520	-				+1.9
1,621,520	-				+0.2
1,621,520	-				-0.9
1,621,520	-				-0.5
1,621,520	-				-1.4
1,621,520	-				+1.9
1,621,520	-				-2.2
1,621,576	+				-1.9
1,621,577	-				+0.5
1,621,603	+				-1.5
1,621,603	+				-2.2
1,621,603	+				+0.1
1,621,603	+				-1.2
1,621,603	+				-0.8
1,621,603	+				-0.4
1,621,604	-				+1.1
1,621,604	-				-0.7
1,621,604	-				-2.5
1,621,604	-				-0.8
1,621,604	-				-0.8
1,621,627	+				-1.3
1,621,627	+				-1.3
1,621,627	+				-0.8
1,621,628	-				-1.4
1,621,628	-				-1.6
1,621,628	-				-1.1
1,621,628	-				-0.2
1,621,628	-				+0.0
1,621,628	-				-1.0
1,621,639	+				-1.8
1,621,639	+				-1.6
1,621,639	+				-1.8
1,621,654	+		LRK53_RS07205	0.10	-0.8
1,621,655	-		LRK53_RS07205	0.10	+0.8
1,621,708	+		LRK53_RS07205	0.13	-0.6
1,621,708	+		LRK53_RS07205	0.13	+0.8
1,621,709	-		LRK53_RS07205	0.13	-1.9
1,621,709	-		LRK53_RS07205	0.13	-0.2
1,621,709	-		LRK53_RS07205	0.13	-2.4
1,621,709	-		LRK53_RS07205	0.13	+0.2
1,621,709	-		LRK53_RS07205	0.13	-1.7
1,621,709	-		LRK53_RS07205	0.13	-1.9
1,621,804	+		LRK53_RS07205	0.17	-0.9
1,621,804	+		LRK53_RS07205	0.17	-1.1
1,621,804	+		LRK53_RS07205	0.17	+0.5
1,621,804	+		LRK53_RS07205	0.17	-0.9
1,621,804	+		LRK53_RS07205	0.17	+0.8
1,621,805	-		LRK53_RS07205	0.17	+1.2
1,621,805	-		LRK53_RS07205	0.17	-1.1
1,621,805	-		LRK53_RS07205	0.17	-2.0
1,621,805	-		LRK53_RS07205	0.17	+0.3
1,621,805	-		LRK53_RS07205	0.17	-0.1
1,621,805	-		LRK53_RS07205	0.17	-1.7
1,621,805	-		LRK53_RS07205	0.17	+0.2
1,621,805	-		LRK53_RS07205	0.17	-0.7
1,621,810	+		LRK53_RS07205	0.17	-1.3
1,621,810	+		LRK53_RS07205	0.17	+0.1
1,621,810	+		LRK53_RS07205	0.17	-0.6
1,621,811	-		LRK53_RS07205	0.17	+0.6
1,621,811	-		LRK53_RS07205	0.17	-1.9
1,621,811	-		LRK53_RS07205	0.17	-1.0
1,621,811	-		LRK53_RS07205	0.17	-0.5
1,621,811	-		LRK53_RS07205	0.17	-0.0
1,621,900	+		LRK53_RS07205	0.21	-0.2
1,621,900	+		LRK53_RS07205	0.21	-0.7
1,621,901	-		LRK53_RS07205	0.21	+0.5
1,621,901	-		LRK53_RS07205	0.21	-1.0
1,621,901	-		LRK53_RS07205	0.21	-0.6
1,621,901	-		LRK53_RS07205	0.21	+0.4
1,621,901	-		LRK53_RS07205	0.21	-0.9
1,621,901	-		LRK53_RS07205	0.21	-1.6
1,621,901	-		LRK53_RS07205	0.21	-0.8
1,621,901	-		LRK53_RS07205	0.21	-1.5
1,621,951	+		LRK53_RS07205	0.24	-2.1
1,621,951	+		LRK53_RS07205	0.24	+0.0
1,621,951	+		LRK53_RS07205	0.24	-2.2
1,621,951	+		LRK53_RS07205	0.24	-0.5
1,621,952	-		LRK53_RS07205	0.24	-0.9
1,621,952	-		LRK53_RS07205	0.24	-1.3
1,621,952	-		LRK53_RS07205	0.24	-1.5
1,621,952	-		LRK53_RS07205	0.24	-1.1
1,621,952	-		LRK53_RS07205	0.24	+0.5
1,621,952	-		LRK53_RS07205	0.24	-1.1
1,621,952	-		LRK53_RS07205	0.24	+0.6
1,621,952	-		LRK53_RS07205	0.24	-0.5
1,621,952	-		LRK53_RS07205	0.24	-2.2
1,621,993	+		LRK53_RS07205	0.26	+0.3
1,621,993	+		LRK53_RS07205	0.26	-0.3
1,621,993	+		LRK53_RS07205	0.26	-1.3
1,621,993	+		LRK53_RS07205	0.26	+0.4
1,621,994	-		LRK53_RS07205	0.26	-0.4
1,621,994	-		LRK53_RS07205	0.26	+0.3
1,621,994	-		LRK53_RS07205	0.26	+0.3
1,622,011	+		LRK53_RS07205	0.27	-0.4
1,622,011	+		LRK53_RS07205	0.27	-1.8
1,622,012	-		LRK53_RS07205	0.27	+0.7
1,622,095	+		LRK53_RS07205	0.30	-0.6
1,622,095	+		LRK53_RS07205	0.30	-1.4
1,622,095	+		LRK53_RS07205	0.30	-1.1
1,622,096	-		LRK53_RS07205	0.30	-0.1
1,622,096	-		LRK53_RS07205	0.30	+0.4
1,622,096	-		LRK53_RS07205	0.30	+1.0
1,622,096	-		LRK53_RS07205	0.30	+0.7
1,622,096	-		LRK53_RS07205	0.30	-1.0
1,622,096	-		LRK53_RS07205	0.30	-1.7
1,622,122	+		LRK53_RS07205	0.32	+0.3
1,622,122	+		LRK53_RS07205	0.32	-1.9
1,622,122	+		LRK53_RS07205	0.32	+1.7
1,622,122	+		LRK53_RS07205	0.32	+0.8
1,622,122	+		LRK53_RS07205	0.32	-1.2
1,622,122	+		LRK53_RS07205	0.32	-0.2
1,622,122	+		LRK53_RS07205	0.32	-0.9
1,622,122	+		LRK53_RS07205	0.32	-0.3
1,622,122	+		LRK53_RS07205	0.32	-1.3
1,622,122	+		LRK53_RS07205	0.32	+0.6
1,622,122	+		LRK53_RS07205	0.32	-0.9
1,622,122	+		LRK53_RS07205	0.32	-1.2
1,622,122	+		LRK53_RS07205	0.32	-1.0
1,622,122	+		LRK53_RS07205	0.32	-0.1
1,622,123	-		LRK53_RS07205	0.32	+0.8
1,622,123	-		LRK53_RS07205	0.32	+0.1
1,622,123	-		LRK53_RS07205	0.32	-1.3
1,622,123	-		LRK53_RS07205	0.32	-0.2
1,622,123	-		LRK53_RS07205	0.32	+0.1
1,622,123	-		LRK53_RS07205	0.32	-1.2
1,622,123	-		LRK53_RS07205	0.32	-1.2
1,622,123	-		LRK53_RS07205	0.32	-0.4
1,622,123	-		LRK53_RS07205	0.32	-0.8
1,622,123	-		LRK53_RS07205	0.32	-2.6
1,622,269	+		LRK53_RS07205	0.38	-0.4
1,622,269	+		LRK53_RS07205	0.38	-1.6
1,622,270	-		LRK53_RS07205	0.39	+1.1
1,622,270	-		LRK53_RS07205	0.39	-0.9
1,622,270	-		LRK53_RS07205	0.39	-2.8
1,622,270	-		LRK53_RS07205	0.39	-2.7
1,622,270	-		LRK53_RS07205	0.39	+0.5
1,622,270	-		LRK53_RS07205	0.39	-0.6
1,622,311	+		LRK53_RS07205	0.40	-2.0
1,622,311	+		LRK53_RS07205	0.40	-0.7
1,622,311	+		LRK53_RS07205	0.40	-1.1
1,622,311	+		LRK53_RS07205	0.40	+0.1
1,622,312	-		LRK53_RS07205	0.40	-0.8
1,622,312	-		LRK53_RS07205	0.40	-1.7
1,622,339	-		LRK53_RS07205	0.42	-0.5
1,622,392	+		LRK53_RS07205	0.44	-0.3
1,622,392	+		LRK53_RS07205	0.44	+0.5
1,622,392	+		LRK53_RS07205	0.44	-0.6
1,622,393	-		LRK53_RS07205	0.44	-1.0
1,622,393	-		LRK53_RS07205	0.44	-1.5
1,622,393	-		LRK53_RS07205	0.44	-0.9
1,622,393	-		LRK53_RS07205	0.44	+1.7
1,622,393	-		LRK53_RS07205	0.44	-0.2
1,622,413	+		LRK53_RS07205	0.45	-0.9
1,622,464	+		LRK53_RS07205	0.47	+0.5
1,622,464	+		LRK53_RS07205	0.47	-0.9
1,622,464	+		LRK53_RS07205	0.47	-2.1
1,622,464	+		LRK53_RS07205	0.47	-1.8
1,622,464	+		LRK53_RS07205	0.47	-1.1
1,622,464	+		LRK53_RS07205	0.47	-2.1
1,622,464	+		LRK53_RS07205	0.47	-0.5
1,622,465	-		LRK53_RS07205	0.48	+0.7
1,622,465	-		LRK53_RS07205	0.48	-0.1
1,622,465	-		LRK53_RS07205	0.48	+0.1
1,622,465	-		LRK53_RS07205	0.48	-0.9
1,622,465	-		LRK53_RS07205	0.48	-0.7
1,622,465	-		LRK53_RS07205	0.48	-0.8
1,622,465	-		LRK53_RS07205	0.48	-0.1
1,622,465	-		LRK53_RS07205	0.48	+1.5
1,622,465	-		LRK53_RS07205	0.48	-0.4
1,622,521	+		LRK53_RS07205	0.50	+0.4
1,622,521	+		LRK53_RS07205	0.50	+0.1
1,622,522	-		LRK53_RS07205	0.50	-0.5
1,622,522	-		LRK53_RS07205	0.50	+1.5
1,622,522	-		LRK53_RS07205	0.50	-2.0
1,622,522	-		LRK53_RS07205	0.50	-1.0
1,622,683	+		LRK53_RS07205	0.58	-0.7
1,622,683	+		LRK53_RS07205	0.58	-0.2
1,622,683	+		LRK53_RS07205	0.58	+1.4
1,622,683	+		LRK53_RS07205	0.58	+1.2
1,622,683	+		LRK53_RS07205	0.58	-1.7
1,622,683	+		LRK53_RS07205	0.58	+1.1
1,622,683	+		LRK53_RS07205	0.58	-1.2
1,622,684	-		LRK53_RS07205	0.58	-0.2
1,622,684	-		LRK53_RS07205	0.58	+0.9
1,622,684	-		LRK53_RS07205	0.58	-0.9
1,622,866	+		LRK53_RS07205	0.66	-2.6
1,622,866	+		LRK53_RS07205	0.66	-3.3
1,622,866	+		LRK53_RS07205	0.66	-1.8
1,622,866	+		LRK53_RS07205	0.66	-0.2
1,622,866	+		LRK53_RS07205	0.66	+1.1
1,622,866	+		LRK53_RS07205	0.66	-0.8
1,622,866	+		LRK53_RS07205	0.66	+0.4
1,622,866	+		LRK53_RS07205	0.66	+1.7
1,622,866	+		LRK53_RS07205	0.66	+0.8
1,622,866	+		LRK53_RS07205	0.66	+0.7
1,622,867	-		LRK53_RS07205	0.66	-1.7
1,622,867	-		LRK53_RS07205	0.66	+0.5
1,622,867	-		LRK53_RS07205	0.66	-1.4
1,622,867	-		LRK53_RS07205	0.66	-0.7
1,622,867	-		LRK53_RS07205	0.66	-1.9
1,622,867	-		LRK53_RS07205	0.66	-1.0
1,622,867	-		LRK53_RS07205	0.66	-1.6
1,622,867	-		LRK53_RS07205	0.66	-0.2
1,622,867	-		LRK53_RS07205	0.66	-0.7
1,622,869	+		LRK53_RS07205	0.66	-0.3
1,622,869	+		LRK53_RS07205	0.66	+1.5
1,622,869	+		LRK53_RS07205	0.66	-0.1
1,622,870	-		LRK53_RS07205	0.66	-1.3
1,622,887	+		LRK53_RS07205	0.67	-1.8
1,622,887	+		LRK53_RS07205	0.67	-0.3
1,622,887	+		LRK53_RS07205	0.67	-1.1
1,622,887	+		LRK53_RS07205	0.67	-0.8
1,622,887	+		LRK53_RS07205	0.67	+0.6
1,622,888	-		LRK53_RS07205	0.67	-0.5
1,622,888	-		LRK53_RS07205	0.67	+1.9
1,622,888	-		LRK53_RS07205	0.67	-1.1
1,622,888	-		LRK53_RS07205	0.67	-0.5
1,623,089	-		LRK53_RS07205	0.76	+0.0
1,623,114	+		LRK53_RS07205	0.78	-2.1
1,623,114	+		LRK53_RS07205	0.78	+0.5
1,623,114	+		LRK53_RS07205	0.78	-0.9
1,623,114	+		LRK53_RS07205	0.78	-2.4
1,623,114	+		LRK53_RS07205	0.78	-0.6
1,623,114	+		LRK53_RS07205	0.78	-0.6
1,623,114	+		LRK53_RS07205	0.78	-1.7
1,623,114	+		LRK53_RS07205	0.78	+0.8
1,623,115	-		LRK53_RS07205	0.78	-1.1
1,623,115	-		LRK53_RS07205	0.78	-0.2
1,623,115	-		LRK53_RS07205	0.78	-0.9
1,623,115	-		LRK53_RS07205	0.78	-3.2
1,623,115	-		LRK53_RS07205	0.78	-1.3
1,623,115	-		LRK53_RS07205	0.78	+1.5
1,623,115	-		LRK53_RS07205	0.78	-0.5
1,623,196	+		LRK53_RS07205	0.81	-0.6
1,623,196	+		LRK53_RS07205	0.81	+1.9
1,623,196	+		LRK53_RS07205	0.81	-1.3
1,623,196	+		LRK53_RS07205	0.81	-0.8
1,623,197	-		LRK53_RS07205	0.81	+1.1
1,623,197	-		LRK53_RS07205	0.81	-0.4
1,623,197	-		LRK53_RS07205	0.81	-0.9
1,623,197	-		LRK53_RS07205	0.81	-0.1
1,623,197	-		LRK53_RS07205	0.81	-0.4
1,623,197	-		LRK53_RS07205	0.81	-1.3
1,623,197	-		LRK53_RS07205	0.81	-0.8
1,623,197	-		LRK53_RS07205	0.81	-0.2
1,623,197	-		LRK53_RS07205	0.81	-1.3
1,623,280	+		LRK53_RS07205	0.85	+0.9
1,623,280	+		LRK53_RS07205	0.85	-2.2
1,623,280	+		LRK53_RS07205	0.85	-1.3
1,623,280	+		LRK53_RS07205	0.85	-0.1
1,623,280	+		LRK53_RS07205	0.85	-0.5
1,623,280	+		LRK53_RS07205	0.85	-0.5
1,623,280	+		LRK53_RS07205	0.85	+0.2
1,623,281	-		LRK53_RS07205	0.85	-0.6
1,623,281	-		LRK53_RS07205	0.85	-1.5
1,623,281	-		LRK53_RS07205	0.85	+2.0
1,623,281	-		LRK53_RS07205	0.85	+0.8
1,623,281	-		LRK53_RS07205	0.85	-2.2
1,623,281	-		LRK53_RS07205	0.85	+1.8
1,623,281	-		LRK53_RS07205	0.85	-0.8
1,623,487	+				-0.6
1,623,488	-				-1.4
1,623,488	-				-1.2
1,623,706	+				-0.7
1,623,707	+				-0.1
1,623,707	+				-0.2
1,623,707	+				-0.5
1,623,708	-				-1.1
1,623,708	-				+0.5
1,623,784	-				-1.3
1,623,788	+				-1.5
1,623,820	+				-0.9
1,623,820	+				-2.2
1,623,973	-				+0.2
1,623,973	-				-0.6
1,623,973	-				+0.9
1,623,973	-				-0.3
1,623,973	-				-0.3
1,624,203	+		LRK53_RS07210	0.19	-0.3
1,624,203	+		LRK53_RS07210	0.19	+0.1
1,624,203	+		LRK53_RS07210	0.19	-0.6
1,624,203	+		LRK53_RS07210	0.19	+0.6
1,624,204	-		LRK53_RS07210	0.19	-0.8
1,624,204	-		LRK53_RS07210	0.19	+1.4
1,624,204	-		LRK53_RS07210	0.19	-0.5
1,624,224	+		LRK53_RS07210	0.20	-0.2
1,624,225	-		LRK53_RS07210	0.20	-0.2
1,624,225	-		LRK53_RS07210	0.20	+0.8
1,624,302	-		LRK53_RS07210	0.24	-1.9
1,624,446	+		LRK53_RS07210	0.32	-1.9
1,624,446	+		LRK53_RS07210	0.32	-1.6
1,624,446	+		LRK53_RS07210	0.32	-1.8
1,624,447	-		LRK53_RS07210	0.32	-2.2
1,624,447	-		LRK53_RS07210	0.32	+0.8
1,624,530	+		LRK53_RS07210	0.36	-0.8
1,624,530	+		LRK53_RS07210	0.36	-0.6
1,624,530	+		LRK53_RS07210	0.36	+0.4
1,624,530	+		LRK53_RS07210	0.36	-0.4
1,624,530	+		LRK53_RS07210	0.36	-1.2
1,624,530	+		LRK53_RS07210	0.36	+0.9
1,624,530	+		LRK53_RS07210	0.36	-1.7
1,624,531	-		LRK53_RS07210	0.36	-0.3
1,624,531	-		LRK53_RS07210	0.36	-2.3
1,624,531	-		LRK53_RS07210	0.36	-0.8
1,624,531	-		LRK53_RS07210	0.36	-0.9
1,624,531	-		LRK53_RS07210	0.36	-1.6
1,624,531	-		LRK53_RS07210	0.36	-2.1
1,624,531	-		LRK53_RS07210	0.36	-1.5
1,624,531	-		LRK53_RS07210	0.36	-0.3
1,624,531	-		LRK53_RS07210	0.36	+0.9
1,624,531	-		LRK53_RS07210	0.36	-0.6
1,624,551	+		LRK53_RS07210	0.37	+1.3
1,624,552	-		LRK53_RS07210	0.37	-0.7
1,624,552	-		LRK53_RS07210	0.37	+1.1
1,624,552	-		LRK53_RS07210	0.37	-0.1
1,624,552	-		LRK53_RS07210	0.37	-0.3
1,624,552	-		LRK53_RS07210	0.37	+1.1
1,624,552	-		LRK53_RS07210	0.37	-0.7
1,624,552	-		LRK53_RS07210	0.37	-1.9