Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS05170

Experiment: biofilm; Day2; NLDM;

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	biofilm; Day2; NLDM;
1,213,623	+		LRK53_RS05165	0.32	-0.3
1,213,623	+		LRK53_RS05165	0.32	-0.0
1,213,623	+		LRK53_RS05165	0.32	-1.2
1,213,623	+		LRK53_RS05165	0.32	-0.3
1,213,623	+		LRK53_RS05165	0.32	-0.1
1,213,624	-		LRK53_RS05165	0.33	+1.1
1,213,624	-		LRK53_RS05165	0.33	-1.5
1,213,624	-		LRK53_RS05165	0.33	-0.3
1,213,624	-		LRK53_RS05165	0.33	-1.5
1,213,624	-		LRK53_RS05165	0.33	-2.3
1,213,624	-		LRK53_RS05165	0.33	-1.5
1,213,624	-		LRK53_RS05165	0.33	+0.8
1,213,839	+		LRK53_RS05165	0.57	-0.1
1,213,839	+		LRK53_RS05165	0.57	+0.1
1,213,839	+		LRK53_RS05165	0.57	-2.1
1,213,840	-		LRK53_RS05165	0.57	-0.2
1,213,840	-		LRK53_RS05165	0.57	-2.4
1,213,875	+		LRK53_RS05165	0.61	-0.3
1,213,875	+		LRK53_RS05165	0.61	-2.3
1,213,875	+		LRK53_RS05165	0.61	-2.1
1,213,875	+		LRK53_RS05165	0.61	+0.6
1,213,875	+		LRK53_RS05165	0.61	-1.0
1,213,875	+		LRK53_RS05165	0.61	-1.2
1,213,875	+		LRK53_RS05165	0.61	+0.7
1,213,876	-		LRK53_RS05165	0.61	-0.3
1,213,876	-		LRK53_RS05165	0.61	-3.1
1,213,876	-		LRK53_RS05165	0.61	+0.5
1,213,918	-		LRK53_RS05165	0.66	-0.5
1,213,950	+		LRK53_RS05165	0.70	-0.0
1,213,950	+		LRK53_RS05165	0.70	+0.5
1,213,968	+		LRK53_RS05165	0.72	-1.5
1,213,968	+		LRK53_RS05165	0.72	-0.7
1,213,969	-		LRK53_RS05165	0.72	-1.5
1,213,969	-		LRK53_RS05165	0.72	-2.5
1,213,969	-		LRK53_RS05165	0.72	+1.5
1,213,971	+		LRK53_RS05165	0.72	-2.4
1,213,971	+		LRK53_RS05165	0.72	-0.1
1,213,971	+		LRK53_RS05165	0.72	-1.6
1,213,971	+		LRK53_RS05165	0.72	-0.5
1,213,971	+		LRK53_RS05165	0.72	+1.3
1,213,971	+		LRK53_RS05165	0.72	+0.7
1,213,972	-		LRK53_RS05165	0.73	-1.0
1,213,972	-		LRK53_RS05165	0.73	-1.1
1,213,972	-		LRK53_RS05165	0.73	-1.8
1,213,972	-		LRK53_RS05165	0.73	-2.6
1,213,972	-		LRK53_RS05165	0.73	-1.9
1,213,972	-		LRK53_RS05165	0.73	-0.8
1,213,972	-		LRK53_RS05165	0.73	-0.5
1,213,986	+		LRK53_RS05165	0.74	-1.2
1,213,987	-		LRK53_RS05165	0.74	-1.3
1,213,987	-		LRK53_RS05165	0.74	-0.5
1,213,987	-		LRK53_RS05165	0.74	-2.2
1,214,074	-		LRK53_RS05165	0.84	-1.9
1,214,074	-		LRK53_RS05165	0.84	-0.8
1,214,140	-				-1.6
1,214,222	+				-0.8
1,214,222	+				-0.5
1,214,222	+				-3.7
1,214,222	+				+1.2
1,214,223	-				-0.5
1,214,223	-				-0.0
1,214,223	-				-0.8
1,214,223	-				-1.1
1,214,223	-				-1.2
1,214,400	+		LRK53_RS05170	0.26	-1.2
1,214,400	+		LRK53_RS05170	0.26	-1.5
1,214,400	+		LRK53_RS05170	0.26	-1.6
1,214,401	-		LRK53_RS05170	0.26	-0.1
1,214,401	-		LRK53_RS05170	0.26	-1.7
1,214,401	-		LRK53_RS05170	0.26	-0.5
1,214,731	-		LRK53_RS05170	0.73	-1.1
1,214,762	+		LRK53_RS05170	0.78	+0.3
1,214,995	+				-0.9
1,214,995	+				-0.5
1,214,995	+				-1.3
1,214,996	-				-0.7
1,214,996	-				+0.2
1,214,996	-				-0.7
1,215,185	-		LRK53_RS05175	0.17	-1.0
1,215,358	+		LRK53_RS05175	0.42	-0.0
1,215,358	+		LRK53_RS05175	0.42	-0.5
1,215,359	-		LRK53_RS05175	0.43	-0.2
1,215,359	-		LRK53_RS05175	0.43	+0.8
1,215,746	-				+0.9
1,215,746	-				+1.2
1,215,776	+				+0.2
1,215,776	+				-1.2
1,215,776	+				-2.0
1,215,776	+				+1.1