Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS04925

Experiment: biofilm; Day2; NLDM;

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	biofilm; Day2; NLDM;
1,145,859	+		LRK53_RS04920	0.68	-1.1
1,145,928	+		LRK53_RS04920	0.71	-0.2
1,145,928	+		LRK53_RS04920	0.71	-2.6
1,145,928	+		LRK53_RS04920	0.71	-0.4
1,145,928	+		LRK53_RS04920	0.71	-0.8
1,145,928	+		LRK53_RS04920	0.71	-1.3
1,145,928	+		LRK53_RS04920	0.71	-1.5
1,145,928	+		LRK53_RS04920	0.71	-1.8
1,145,929	-		LRK53_RS04920	0.71	-0.7
1,145,929	-		LRK53_RS04920	0.71	+0.4
1,145,929	-		LRK53_RS04920	0.71	-1.0
1,145,929	-		LRK53_RS04920	0.71	-0.6
1,145,929	-		LRK53_RS04920	0.71	-0.5
1,145,929	-		LRK53_RS04920	0.71	-2.6
1,145,929	-		LRK53_RS04920	0.71	-1.2
1,145,929	-		LRK53_RS04920	0.71	+1.9
1,145,955	+		LRK53_RS04920	0.72	-1.1
1,146,060	+		LRK53_RS04920	0.76	-0.0
1,146,060	+		LRK53_RS04920	0.76	-1.6
1,146,060	+		LRK53_RS04920	0.76	+0.0
1,146,060	+		LRK53_RS04920	0.76	-1.4
1,146,060	+		LRK53_RS04920	0.76	-2.0
1,146,060	+		LRK53_RS04920	0.76	-1.0
1,146,061	-		LRK53_RS04920	0.76	+0.2
1,146,061	-		LRK53_RS04920	0.76	-0.1
1,146,061	-		LRK53_RS04920	0.76	+0.8
1,146,097	-		LRK53_RS04920	0.77	+0.8
1,146,124	-		LRK53_RS04920	0.78	-0.1
1,146,162	+		LRK53_RS04920	0.80	-1.4
1,146,162	+		LRK53_RS04920	0.80	-0.3
1,146,162	+		LRK53_RS04920	0.80	+0.9
1,146,162	+		LRK53_RS04920	0.80	-0.5
1,146,162	+		LRK53_RS04920	0.80	+0.9
1,146,163	-		LRK53_RS04920	0.80	-0.9
1,146,163	-		LRK53_RS04920	0.80	-2.8
1,146,243	+		LRK53_RS04920	0.83	+1.5
1,146,243	+		LRK53_RS04920	0.83	-0.6
1,146,243	+		LRK53_RS04920	0.83	-1.1
1,146,243	+		LRK53_RS04920	0.83	-1.8
1,146,243	+		LRK53_RS04920	0.83	-1.8
1,146,243	+		LRK53_RS04920	0.83	-0.0
1,146,243	+		LRK53_RS04920	0.83	-0.7
1,146,243	+		LRK53_RS04920	0.83	-1.6
1,146,243	+		LRK53_RS04920	0.83	-0.8
1,146,243	+		LRK53_RS04920	0.83	-0.5
1,146,243	+		LRK53_RS04920	0.83	-1.0
1,146,243	+		LRK53_RS04920	0.83	-1.9
1,146,243	+		LRK53_RS04920	0.83	-0.6
1,146,244	-		LRK53_RS04920	0.83	-0.3
1,146,244	-		LRK53_RS04920	0.83	-1.1
1,146,244	-		LRK53_RS04920	0.83	-0.9
1,146,244	-		LRK53_RS04920	0.83	-0.4
1,146,244	-		LRK53_RS04920	0.83	-0.6
1,146,244	-		LRK53_RS04920	0.83	-1.3
1,146,244	-		LRK53_RS04920	0.83	-0.7
1,146,244	-		LRK53_RS04920	0.83	-1.3
1,146,244	-		LRK53_RS04920	0.83	+0.6
1,146,244	-		LRK53_RS04920	0.83	+0.3
1,146,258	+		LRK53_RS04920	0.84	+0.0
1,146,259	-		LRK53_RS04920	0.84	-0.6
1,146,285	+		LRK53_RS04920	0.85	-1.6
1,146,286	-		LRK53_RS04920	0.85	-1.2
1,146,361	-		LRK53_RS04920	0.88	-0.3
1,146,379	-		LRK53_RS04920	0.88	-1.2
1,146,423	+		LRK53_RS04920	0.90	+0.2
1,146,423	+		LRK53_RS04920	0.90	-1.9
1,146,423	+		LRK53_RS04920	0.90	+0.3
1,146,423	+		LRK53_RS04920	0.90	-0.6
1,146,423	+		LRK53_RS04920	0.90	-1.0
1,146,424	-				-0.2
1,146,424	-				-0.4
1,146,424	-				+1.7
1,146,424	-				-1.5
1,146,424	-				-0.8
1,146,429	+				-0.1
1,146,429	+				+0.1
1,146,429	+				-1.3
1,146,429	+				+0.5
1,146,429	+				-1.5
1,146,429	+				-0.8
1,146,429	+				-1.3
1,146,429	+				-0.4
1,146,429	+				-0.3
1,146,429	+				+1.4
1,146,429	+				-1.8
1,146,429	+				+0.5
1,146,429	+				-0.1
1,146,429	+				-0.9
1,146,430	-				-0.1
1,146,430	-				-1.6
1,146,430	-				+0.9
1,146,430	-				+1.5
1,146,430	-				-1.3
1,146,430	-				-0.6
1,146,430	-				+1.2
1,146,430	-				+1.9
1,146,430	-				-0.6
1,146,445	-				-0.8
1,146,480	+				-1.0
1,146,480	+				+0.9
1,146,481	-				-0.8
1,146,483	+				-0.8
1,146,483	+				+0.9
1,146,484	-				-1.3
1,146,484	-				-0.5
1,146,484	-				-1.4
1,146,484	-				+1.2
1,146,484	-				-1.3
1,146,484	-				+0.3
1,146,484	-				-1.2
1,146,484	-				-0.8
1,146,669	+				+0.2
1,146,669	+				-1.6
1,146,669	+				-0.9
1,146,669	+				-0.9
1,146,670	-				+0.1
1,146,670	-				-1.0
1,146,670	-				+0.2
1,146,670	-				-0.2
1,146,823	+				+0.4
1,146,823	+				-0.7
1,146,823	+				-1.1
1,146,823	+				+0.0
1,146,823	+				+0.7
1,146,823	+				-0.6
1,146,823	+				-1.2
1,146,823	+				+1.2
1,146,823	+				-1.6
1,146,823	+				-0.2
1,146,823	+				-1.4
1,146,823	+				+1.6
1,146,823	+				-0.1
1,146,823	+				-0.9
1,146,823	+				-0.6
1,146,823	+				-2.1
1,146,823	+				-0.8
1,146,823	+				-2.0
1,146,823	+				-1.4
1,146,823	+				-0.5
1,146,823	+				-1.1
1,146,823	+				-0.1
1,146,823	+				-0.6
1,146,823	+				-0.2
1,146,824	-				+0.7
1,146,824	-				-0.8
1,146,824	-				-0.3
1,146,824	-				-1.0
1,146,824	-				+0.3
1,146,824	-				-0.1
1,146,824	-				-0.2
1,146,824	-				-0.5
1,146,824	-				+0.3
1,146,824	-				-1.1
1,146,824	-				-1.0
1,146,833	+				+1.5
1,146,833	+				-1.4
1,146,833	+				-0.5
1,146,833	+				-0.4
1,146,833	+				-1.2
1,146,833	+				+1.5
1,146,834	-				+1.5
1,146,834	-				-0.1
1,146,834	-				-3.7
1,146,834	-				+0.2
1,146,834	-				-2.9
1,146,834	-				+1.7
1,146,834	-				-1.5
1,146,834	-				+1.3
1,146,834	-				-1.2
1,146,834	-				+1.4
1,146,834	-				-1.9
1,146,834	-				+1.0
1,146,853	+				-3.0
1,146,853	+				+1.5
1,146,853	+				+1.6
1,146,853	+				-1.1
1,146,854	-				-0.7
1,146,854	-				+0.1
1,146,854	-				-1.3
1,146,854	-				-0.4
1,146,854	-				-2.2
1,146,862	+				-1.1
1,146,862	+				-1.6
1,146,862	+				+1.3
1,146,862	+				+0.5
1,146,862	+				+0.2
1,146,862	+				-2.0
1,146,862	+				+0.0
1,146,863	-				-0.2
1,146,863	-				-1.3
1,146,863	-				-0.5
1,146,863	-				-1.1
1,146,863	-				-0.7
1,146,863	-				+0.8
1,146,863	-				-1.3
1,146,863	-				+1.8
1,146,863	-				-0.2
1,146,863	-				-0.9
1,146,863	-				-1.3
1,146,863	-				-1.8
1,146,863	-				-1.8
1,146,863	-				+2.1
1,146,863	-				-1.7
1,146,863	-				-2.7
1,146,863	-				-1.9
1,146,863	-				-1.8
1,146,974	-				+0.5
1,146,974	-				-0.4
1,146,974	-				-2.3
1,146,974	-				-0.4
1,147,064	-		LRK53_RS04925	0.10	-0.8
1,147,246	+		LRK53_RS04925	0.19	-0.8
1,147,246	+		LRK53_RS04925	0.19	-2.3
1,147,246	+		LRK53_RS04925	0.19	+0.5
1,147,246	+		LRK53_RS04925	0.19	-1.9
1,147,246	+		LRK53_RS04925	0.19	-1.6
1,147,246	+		LRK53_RS04925	0.19	+0.8
1,147,247	-		LRK53_RS04925	0.19	-1.3
1,147,247	-		LRK53_RS04925	0.19	-0.8
1,147,247	-		LRK53_RS04925	0.19	-0.7
1,147,247	-		LRK53_RS04925	0.19	-1.4
1,147,282	+		LRK53_RS04925	0.21	+0.9
1,147,282	+		LRK53_RS04925	0.21	+0.5
1,147,282	+		LRK53_RS04925	0.21	-1.0
1,147,283	-		LRK53_RS04925	0.21	-0.3
1,147,283	-		LRK53_RS04925	0.21	-0.3
1,147,283	-		LRK53_RS04925	0.21	-1.8
1,147,368	+		LRK53_RS04925	0.25	-1.2
1,147,560	+		LRK53_RS04925	0.35	-0.6
1,147,561	-		LRK53_RS04925	0.35	-1.5
1,147,561	-		LRK53_RS04925	0.35	+0.5
1,147,561	-		LRK53_RS04925	0.35	+0.8
1,147,654	+		LRK53_RS04925	0.39	-0.7
1,147,654	+		LRK53_RS04925	0.39	-0.6
1,147,654	+		LRK53_RS04925	0.39	-1.3
1,147,654	+		LRK53_RS04925	0.39	-1.1
1,147,655	-		LRK53_RS04925	0.40	-1.5
1,147,655	-		LRK53_RS04925	0.40	+0.6
1,147,655	-		LRK53_RS04925	0.40	-0.1
1,147,798	+		LRK53_RS04925	0.47	-2.7
1,147,798	+		LRK53_RS04925	0.47	-0.7
1,147,798	+		LRK53_RS04925	0.47	-1.3
1,147,799	-		LRK53_RS04925	0.47	-1.4
1,147,799	-		LRK53_RS04925	0.47	-0.2
1,147,799	-		LRK53_RS04925	0.47	-1.3
1,147,799	-		LRK53_RS04925	0.47	+0.2
1,147,912	+		LRK53_RS04925	0.52	-2.5
1,147,912	+		LRK53_RS04925	0.52	-1.5
1,147,912	+		LRK53_RS04925	0.52	-0.5
1,147,913	-		LRK53_RS04925	0.52	-0.4
1,147,913	-		LRK53_RS04925	0.52	-0.4
1,147,948	+		LRK53_RS04925	0.54	-0.6
1,147,948	+		LRK53_RS04925	0.54	-0.1
1,147,949	-		LRK53_RS04925	0.54	+0.2
1,147,949	-		LRK53_RS04925	0.54	+1.9
1,147,980	+		LRK53_RS04925	0.56	-1.3
1,147,980	+		LRK53_RS04925	0.56	-2.2
1,147,981	-		LRK53_RS04925	0.56	-1.6
1,147,981	-		LRK53_RS04925	0.56	-1.0
1,147,981	-		LRK53_RS04925	0.56	-1.0
1,147,981	-		LRK53_RS04925	0.56	-0.7
1,148,020	+		LRK53_RS04925	0.58	-0.5
1,148,020	+		LRK53_RS04925	0.58	-0.5
1,148,020	+		LRK53_RS04925	0.58	+0.7
1,148,020	+		LRK53_RS04925	0.58	-0.3
1,148,020	+		LRK53_RS04925	0.58	+1.2
1,148,021	-		LRK53_RS04925	0.58	-1.2
1,148,021	-		LRK53_RS04925	0.58	-1.0
1,148,059	+		LRK53_RS04925	0.60	-1.1
1,148,059	+		LRK53_RS04925	0.60	-0.5
1,148,059	+		LRK53_RS04925	0.60	-0.5
1,148,059	+		LRK53_RS04925	0.60	-0.6
1,148,059	+		LRK53_RS04925	0.60	-0.4
1,148,059	+		LRK53_RS04925	0.60	-0.8
1,148,059	+		LRK53_RS04925	0.60	+0.1
1,148,059	+		LRK53_RS04925	0.60	-1.0
1,148,059	+		LRK53_RS04925	0.60	+0.3
1,148,059	+		LRK53_RS04925	0.60	+1.6
1,148,059	+		LRK53_RS04925	0.60	-0.2
1,148,059	+		LRK53_RS04925	0.60	-0.9
1,148,059	+		LRK53_RS04925	0.60	-0.5
1,148,060	-		LRK53_RS04925	0.60	-0.8
1,148,060	-		LRK53_RS04925	0.60	-0.3
1,148,060	-		LRK53_RS04925	0.60	-1.3
1,148,060	-		LRK53_RS04925	0.60	-0.3
1,148,060	-		LRK53_RS04925	0.60	-0.8
1,148,060	-		LRK53_RS04925	0.60	+0.7
1,148,060	-		LRK53_RS04925	0.60	-3.9
1,148,060	-		LRK53_RS04925	0.60	-1.4
1,148,060	-		LRK53_RS04925	0.60	-1.4
1,148,060	-		LRK53_RS04925	0.60	-1.8
1,148,060	-		LRK53_RS04925	0.60	-0.9
1,148,060	-		LRK53_RS04925	0.60	-0.2
1,148,060	-		LRK53_RS04925	0.60	+0.7
1,148,060	-		LRK53_RS04925	0.60	+0.4
1,148,060	-		LRK53_RS04925	0.60	-0.7
1,148,060	-		LRK53_RS04925	0.60	-1.0
1,148,060	-		LRK53_RS04925	0.60	-3.2
1,148,060	-		LRK53_RS04925	0.60	-3.0
1,148,060	-		LRK53_RS04925	0.60	-1.6
1,148,060	-		LRK53_RS04925	0.60	-1.4
1,148,077	+		LRK53_RS04925	0.61	+0.5
1,148,077	+		LRK53_RS04925	0.61	-0.9
1,148,078	-		LRK53_RS04925	0.61	-1.6
1,148,131	+		LRK53_RS04925	0.63	-0.2
1,148,131	+		LRK53_RS04925	0.63	-1.7
1,148,132	-		LRK53_RS04925	0.63	-0.6
1,148,272	+		LRK53_RS04925	0.70	+0.9
1,148,272	+		LRK53_RS04925	0.70	-0.7
1,148,272	+		LRK53_RS04925	0.70	-2.5
1,148,273	-		LRK53_RS04925	0.70	+0.8
1,148,273	-		LRK53_RS04925	0.70	-0.9
1,148,273	-		LRK53_RS04925	0.70	-1.6
1,148,278	+		LRK53_RS04925	0.70	+1.0
1,148,278	+		LRK53_RS04925	0.70	-0.0
1,148,278	+		LRK53_RS04925	0.70	-0.7
1,148,278	+		LRK53_RS04925	0.70	-0.4
1,148,278	+		LRK53_RS04925	0.70	-0.3
1,148,279	-		LRK53_RS04925	0.71	-0.8
1,148,279	-		LRK53_RS04925	0.71	+1.1
1,148,279	-		LRK53_RS04925	0.71	-1.3
1,148,279	-		LRK53_RS04925	0.71	-0.1
1,148,279	-		LRK53_RS04925	0.71	+0.5
1,148,410	+		LRK53_RS04925	0.77	-1.2
1,148,410	+		LRK53_RS04925	0.77	-0.7
1,148,411	-		LRK53_RS04925	0.77	-0.8
1,148,411	-		LRK53_RS04925	0.77	-1.0
1,148,411	-		LRK53_RS04925	0.77	-2.1
1,148,455	+		LRK53_RS04925	0.79	-0.8
1,148,456	-		LRK53_RS04925	0.79	-2.5
1,148,492	+		LRK53_RS04925	0.81	-1.1
1,148,493	-		LRK53_RS04925	0.81	-0.1
1,148,557	+		LRK53_RS04925	0.84	+0.2
1,148,557	+		LRK53_RS04925	0.84	-1.8
1,148,557	+		LRK53_RS04925	0.84	-0.7
1,148,557	+		LRK53_RS04925	0.84	-0.6
1,148,557	+		LRK53_RS04925	0.84	-0.5
1,148,557	+		LRK53_RS04925	0.84	-1.3
1,148,557	+		LRK53_RS04925	0.84	-0.3
1,148,557	+		LRK53_RS04925	0.84	+0.8
1,148,557	+		LRK53_RS04925	0.84	+0.4
1,148,557	+		LRK53_RS04925	0.84	-1.0
1,148,557	+		LRK53_RS04925	0.84	+0.2
1,148,557	+		LRK53_RS04925	0.84	-0.3
1,148,557	+		LRK53_RS04925	0.84	-1.4
1,148,557	+		LRK53_RS04925	0.84	+0.3
1,148,557	+		LRK53_RS04925	0.84	+1.5
1,148,557	+		LRK53_RS04925	0.84	-1.6
1,148,557	+		LRK53_RS04925	0.84	-0.7
1,148,557	+		LRK53_RS04925	0.84	-0.8
1,148,557	+		LRK53_RS04925	0.84	-1.2
1,148,557	+		LRK53_RS04925	0.84	-1.5
1,148,557	+		LRK53_RS04925	0.84	+0.2
1,148,557	+		LRK53_RS04925	0.84	-0.1
1,148,557	+		LRK53_RS04925	0.84	-1.4
1,148,557	+		LRK53_RS04925	0.84	-1.1
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