Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS04790

Experiment: biofilm; Day2; NLDM;

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	biofilm; Day2; NLDM;
1,115,575	-				-2.1
1,115,575	-				-0.6
1,115,576	+				-0.2
1,115,576	+				-2.2
1,115,576	+				-0.1
1,115,576	+				-1.2
1,115,576	+				-2.2
1,115,577	-				-0.7
1,115,577	-				-0.8
1,115,577	-				+1.5
1,115,577	-				-2.0
1,115,636	+				+1.9
1,115,636	+				+0.1
1,115,636	+				-2.1
1,115,636	+				+0.3
1,115,636	+				+0.2
1,115,636	+				-0.0
1,115,636	+				-2.2
1,115,636	+				-1.2
1,115,636	+				-0.6
1,115,636	+				-0.9
1,115,636	+				+0.7
1,115,636	+				-2.7
1,115,636	+				-0.9
1,115,636	+				-0.8
1,115,636	+				-0.2
1,115,636	+				-1.2
1,115,636	+				-0.7
1,115,636	+				-0.3
1,115,636	+				-1.5
1,115,636	+				-1.5
1,115,636	+				+0.6
1,115,636	+				+0.2
1,115,636	+				+0.3
1,115,636	+				-1.7
1,115,636	+				-1.6
1,115,636	+				-2.6
1,115,636	+				-1.0
1,115,636	+				+0.0
1,115,636	+				+1.9
1,115,636	+				-1.8
1,115,636	+				-0.7
1,115,637	-				+0.5
1,115,637	-				-0.6
1,115,637	-				+0.3
1,115,637	-				-1.4
1,115,637	-				-0.3
1,115,637	-				-0.7
1,115,637	-				-0.7
1,115,637	-				-0.4
1,115,637	-				-0.5
1,115,637	-				-0.0
1,115,637	-				+0.0
1,115,637	-				-2.4
1,115,637	-				+0.5
1,115,637	-				-0.2
1,115,637	-				-0.7
1,115,637	-				-2.3
1,115,637	-				+0.9
1,115,637	-				+0.4
1,115,637	-				-2.4
1,115,637	-				-0.2
1,115,637	-				-0.1
1,115,637	-				-0.7
1,115,637	-				+0.5
1,115,637	-				-0.2
1,115,637	-				-1.3
1,115,637	-				-0.8
1,115,637	-				-0.7
1,115,637	-				+0.3
1,115,637	-				-0.5
1,115,637	-				-1.0
1,115,637	-				-1.9
1,115,637	-				+0.9
1,115,637	-				-0.7
1,115,638	+				+1.0
1,115,638	+				-0.9
1,115,639	-				-1.1
1,115,639	-				+0.7
1,115,689	+				-1.3
1,115,780	+				-1.1
1,115,780	+				+0.3
1,115,837	+		LRK53_RS04790	0.13	-0.9
1,115,837	+		LRK53_RS04790	0.13	-0.3
1,115,838	-		LRK53_RS04790	0.14	-0.1
1,115,838	-		LRK53_RS04790	0.14	+1.5
1,115,838	-		LRK53_RS04790	0.14	-1.0
1,115,838	-		LRK53_RS04790	0.14	-1.2
1,116,422	+		LRK53_RS04790	0.62	-1.2
1,116,422	+		LRK53_RS04790	0.62	-0.8
1,116,422	+		LRK53_RS04790	0.62	+0.3
1,116,422	+		LRK53_RS04790	0.62	-1.0
1,116,422	+		LRK53_RS04790	0.62	-0.7
1,116,422	+		LRK53_RS04790	0.62	+0.5
1,116,422	+		LRK53_RS04790	0.62	-0.2
1,116,422	+		LRK53_RS04790	0.62	-1.3
1,116,422	+		LRK53_RS04790	0.62	-1.2
1,116,422	+		LRK53_RS04790	0.62	-2.4
1,116,422	+		LRK53_RS04790	0.62	-1.6
1,116,422	+		LRK53_RS04790	0.62	-1.4
1,116,422	+		LRK53_RS04790	0.62	-1.3
1,116,422	+		LRK53_RS04790	0.62	-0.3
1,116,422	+		LRK53_RS04790	0.62	-0.1
1,116,422	+		LRK53_RS04790	0.62	+0.2
1,116,423	-		LRK53_RS04790	0.62	-3.3
1,116,423	-		LRK53_RS04790	0.62	+1.8
1,116,423	-		LRK53_RS04790	0.62	-0.8
1,116,423	-		LRK53_RS04790	0.62	-2.3
1,116,423	-		LRK53_RS04790	0.62	-0.1
1,116,423	-		LRK53_RS04790	0.62	+0.1
1,116,423	-		LRK53_RS04790	0.62	+0.1
1,116,423	-		LRK53_RS04790	0.62	-0.5
1,116,423	-		LRK53_RS04790	0.62	-1.8
1,116,423	-		LRK53_RS04790	0.62	+0.1
1,116,423	-		LRK53_RS04790	0.62	-1.7
1,116,423	-		LRK53_RS04790	0.62	+1.3
1,116,423	-		LRK53_RS04790	0.62	-1.8
1,116,597	+		LRK53_RS04790	0.76	-0.5
1,116,692	+		LRK53_RS04790	0.84	+1.5
1,116,692	+		LRK53_RS04790	0.84	-2.2
1,116,693	-		LRK53_RS04790	0.84	-2.4
1,116,693	-		LRK53_RS04790	0.84	-0.8
1,116,879	-				+0.3
1,117,817	+		LRK53_RS04795	0.76	+1.4
1,117,817	+		LRK53_RS04795	0.76	+0.5
1,117,817	+		LRK53_RS04795	0.76	-0.4
1,117,817	+		LRK53_RS04795	0.76	-0.5
1,117,817	+		LRK53_RS04795	0.76	+0.3
1,117,817	+		LRK53_RS04795	0.76	+0.3
1,117,817	+		LRK53_RS04795	0.76	-1.0
1,117,817	+		LRK53_RS04795	0.76	-1.8
1,117,817	+		LRK53_RS04795	0.76	+0.6
1,117,817	+		LRK53_RS04795	0.76	-2.0
1,117,817	+		LRK53_RS04795	0.76	-0.5
1,117,817	+		LRK53_RS04795	0.76	+0.5
1,117,860	-		LRK53_RS04795	0.80	-0.6
1,117,860	-		LRK53_RS04795	0.80	-1.1