Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS00380

Experiment: biofilm; Day2; NLDM;

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	biofilm; Day2; NLDM;
85,378	+		LRK53_RS00370	0.64	+0.6
85,378	+		LRK53_RS00370	0.64	-0.7
85,378	+		LRK53_RS00370	0.64	+0.3
85,379	-		LRK53_RS00370	0.64	-0.9
85,432	+		LRK53_RS00370	0.74	+0.1
85,432	+		LRK53_RS00370	0.74	+1.1
85,432	+		LRK53_RS00370	0.74	-0.3
85,432	+		LRK53_RS00370	0.74	-0.3
85,432	+		LRK53_RS00370	0.74	-0.1
85,433	-		LRK53_RS00370	0.74	-0.8
85,433	-		LRK53_RS00370	0.74	-1.9
85,433	-		LRK53_RS00370	0.74	+0.4
85,433	-		LRK53_RS00370	0.74	-1.2
85,433	-		LRK53_RS00370	0.74	-1.2
85,533	+				-0.4
85,533	+				+2.1
85,533	+				+0.6
85,533	+				+1.7
85,533	+				+0.6
85,533	+				-0.7
85,533	+				-2.4
85,533	+				-0.7
85,533	+				+0.3
85,533	+				-0.0
85,533	+				-1.5
85,533	+				-0.1
85,534	-				-0.1
85,534	-				-0.8
85,534	-				-0.7
85,534	-				-2.5
85,534	-				+1.3
85,534	-				-1.6
85,534	-				-0.3
85,534	-				+0.2
85,534	-				+0.3
85,534	-				+0.3
85,534	-				-0.6
85,534	-				+0.7
85,534	-				+1.9
85,534	-				-2.0
85,614	+				-0.7
85,615	-				-1.6
85,681	-		LRK53_RS00375	0.12	-0.5
85,681	-		LRK53_RS00375	0.12	+2.4
85,940	+		LRK53_RS00375	0.54	-1.3
85,941	-		LRK53_RS00375	0.54	-1.6
85,941	-		LRK53_RS00375	0.54	-0.2
85,941	-		LRK53_RS00375	0.54	-1.2
86,283	+				+0.1
86,283	+				-1.4
86,283	+				-1.8
86,283	+				+0.9
86,284	-				-1.0
86,631	+		LRK53_RS00380	0.66	-1.9
86,806	+				-0.5
86,807	-				-1.4
86,844	+				-1.3
86,844	+				-1.1
86,844	+				-0.1
86,844	+				+1.1
86,844	+				-0.6
86,844	+				-1.5
86,845	-				+0.1
86,845	-				+0.3
86,845	-				+0.4
86,857	+				-0.5
86,857	+				-0.3
86,857	+				-1.4
86,857	+				-1.1
86,857	+				+0.0
86,857	+				-0.2
86,858	-				-0.2
86,858	-				+1.6
86,858	-				-0.4
86,865	+				+0.2
86,865	+				-0.4
86,866	-				-0.1
86,874	+				+1.7
86,875	-				-1.4
86,986	+				-0.6
86,987	-				-0.2
86,987	-				-3.3
86,987	-				+1.4
86,987	-				-0.4
87,056	+		LRK53_RS00385	0.13	+0.4
87,056	+		LRK53_RS00385	0.13	+0.2
87,056	+		LRK53_RS00385	0.13	-1.2
87,056	+		LRK53_RS00385	0.13	-0.4
87,056	+		LRK53_RS00385	0.13	-0.8
87,056	+		LRK53_RS00385	0.13	+1.2
87,057	-		LRK53_RS00385	0.13	+0.3
87,057	-		LRK53_RS00385	0.13	-1.2
87,057	-		LRK53_RS00385	0.13	-0.8
87,057	-		LRK53_RS00385	0.13	-0.2
87,103	-		LRK53_RS00385	0.16	-0.3
87,631	+		LRK53_RS00385	0.52	+0.3
87,678	+		LRK53_RS00385	0.55	-0.8
87,678	+		LRK53_RS00385	0.55	-1.0
87,678	+		LRK53_RS00385	0.55	+1.7
87,678	+		LRK53_RS00385	0.55	-1.8
87,679	-		LRK53_RS00385	0.55	-1.2
87,679	-		LRK53_RS00385	0.55	-0.7
87,679	-		LRK53_RS00385	0.55	-0.3
87,679	-		LRK53_RS00385	0.55	-1.0
87,679	-		LRK53_RS00385	0.55	+0.1