Experiment: Motility_outer_sample_with_outgrowth
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS44150 and QEN71_RS44155 are separated by 6 nucleotides QEN71_RS44155 and QEN71_RS44160 overlap by 26 nucleotides
QEN71_RS44150: QEN71_RS44150 - Mu transposase C-terminal domain-containing protein, at 309,625 to 311,250
_RS44150
QEN71_RS44155: QEN71_RS44155 - TniB family NTP-binding protein, at 311,257 to 312,129
_RS44155
QEN71_RS44160: QEN71_RS44160 - TniQ family protein, at 312,104 to 312,634
_RS44160
Position (kb) 309
310
311
312 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 308.643 kb on + strand at 308.643 kb on + strand at 308.653 kb on + strand at 308.653 kb on + strand at 308.653 kb on + strand at 308.654 kb on - strand at 308.755 kb on + strand at 308.755 kb on + strand at 308.755 kb on + strand at 308.756 kb on - strand at 308.756 kb on - strand at 308.756 kb on - strand at 308.756 kb on - strand at 308.846 kb on + strand at 308.925 kb on + strand at 308.925 kb on + strand at 308.925 kb on + strand at 308.926 kb on - strand at 309.027 kb on + strand at 309.027 kb on + strand at 309.028 kb on - strand at 309.059 kb on + strand at 309.059 kb on + strand at 309.101 kb on + strand at 309.101 kb on + strand at 309.102 kb on - strand at 309.266 kb on + strand at 309.468 kb on - strand at 309.469 kb on + strand at 309.470 kb on - strand at 309.470 kb on - strand at 309.470 kb on - strand at 309.470 kb on - strand at 309.470 kb on - strand at 309.504 kb on + strand at 309.505 kb on - strand at 309.599 kb on - strand at 309.629 kb on + strand at 309.629 kb on + strand at 309.760 kb on + strand at 309.837 kb on + strand, within QEN71_RS44150 at 309.858 kb on + strand, within QEN71_RS44150 at 309.858 kb on + strand, within QEN71_RS44150 at 309.859 kb on - strand, within QEN71_RS44150 at 309.859 kb on - strand, within QEN71_RS44150 at 309.859 kb on - strand, within QEN71_RS44150 at 309.859 kb on - strand, within QEN71_RS44150 at 309.881 kb on + strand, within QEN71_RS44150 at 309.881 kb on + strand, within QEN71_RS44150 at 309.882 kb on - strand, within QEN71_RS44150 at 309.882 kb on - strand, within QEN71_RS44150 at 309.938 kb on + strand, within QEN71_RS44150 at 309.939 kb on - strand, within QEN71_RS44150 at 310.123 kb on - strand, within QEN71_RS44150 at 310.137 kb on + strand, within QEN71_RS44150 at 310.137 kb on + strand, within QEN71_RS44150 at 310.137 kb on + strand, within QEN71_RS44150 at 310.138 kb on - strand, within QEN71_RS44150 at 310.138 kb on - strand, within QEN71_RS44150 at 310.142 kb on + strand, within QEN71_RS44150 at 310.142 kb on + strand, within QEN71_RS44150 at 310.393 kb on - strand, within QEN71_RS44150 at 310.438 kb on + strand, within QEN71_RS44150 at 310.439 kb on - strand, within QEN71_RS44150 at 310.439 kb on - strand, within QEN71_RS44150 at 310.497 kb on + strand, within QEN71_RS44150 at 310.498 kb on - strand, within QEN71_RS44150 at 310.639 kb on + strand, within QEN71_RS44150 at 310.694 kb on + strand, within QEN71_RS44150 at 310.694 kb on + strand, within QEN71_RS44150 at 310.694 kb on + strand, within QEN71_RS44150 at 310.695 kb on - strand, within QEN71_RS44150 at 310.695 kb on - strand, within QEN71_RS44150 at 310.695 kb on - strand, within QEN71_RS44150 at 310.808 kb on + strand, within QEN71_RS44150 at 310.839 kb on + strand, within QEN71_RS44150 at 310.839 kb on + strand, within QEN71_RS44150 at 310.840 kb on - strand, within QEN71_RS44150 at 310.840 kb on - strand, within QEN71_RS44150 at 310.879 kb on + strand, within QEN71_RS44150 at 310.906 kb on + strand, within QEN71_RS44150 at 310.906 kb on + strand, within QEN71_RS44150 at 310.907 kb on - strand, within QEN71_RS44150 at 310.907 kb on - strand, within QEN71_RS44150 at 310.907 kb on - strand, within QEN71_RS44150 at 310.911 kb on - strand, within QEN71_RS44150 at 310.997 kb on + strand, within QEN71_RS44150 at 311.109 kb on - strand at 311.112 kb on - strand at 311.179 kb on - strand at 311.210 kb on - strand at 311.210 kb on - strand at 311.212 kb on - strand at 311.222 kb on + strand at 311.255 kb on + strand at 311.256 kb on - strand at 311.256 kb on - strand at 311.362 kb on + strand, within QEN71_RS44155 at 311.362 kb on + strand, within QEN71_RS44155 at 311.397 kb on + strand, within QEN71_RS44155 at 311.402 kb on + strand, within QEN71_RS44155 at 311.402 kb on + strand, within QEN71_RS44155 at 311.403 kb on - strand, within QEN71_RS44155 at 311.461 kb on - strand, within QEN71_RS44155 at 311.603 kb on + strand, within QEN71_RS44155 at 311.989 kb on + strand, within QEN71_RS44155 at 311.990 kb on - strand, within QEN71_RS44155 at 311.990 kb on - strand, within QEN71_RS44155 at 311.993 kb on + strand, within QEN71_RS44155 at 311.993 kb on + strand, within QEN71_RS44155 at 311.994 kb on - strand, within QEN71_RS44155 at 311.994 kb on - strand, within QEN71_RS44155 at 312.027 kb on - strand, within QEN71_RS44155 at 312.099 kb on - strand at 312.114 kb on + strand at 312.114 kb on + strand at 312.115 kb on - strand at 312.127 kb on + strand at 312.127 kb on + strand at 312.131 kb on + strand at 312.131 kb on + strand at 312.132 kb on - strand at 312.132 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Motility_outer_sample_with_outgrowth remove 308,643 + +0.4 308,643 + -1.0 308,653 + +0.4 308,653 + -0.5 308,653 + -1.1 308,654 - -1.0 308,755 + +1.3 308,755 + -0.1 308,755 + -0.8 308,756 - -0.6 308,756 - -0.4 308,756 - +0.9 308,756 - +0.6 308,846 + -0.5 308,925 + -0.4 308,925 + -0.5 308,925 + -0.6 308,926 - +0.1 309,027 + -0.2 309,027 + +0.2 309,028 - -0.1 309,059 + +0.4 309,059 + +0.6 309,101 + -0.6 309,101 + -0.4 309,102 - +0.7 309,266 + -2.4 309,468 - +0.3 309,469 + +0.4 309,470 - +0.7 309,470 - -0.2 309,470 - +0.1 309,470 - +0.5 309,470 - -1.1 309,504 + +0.2 309,505 - +0.1 309,599 - -3.1 309,629 + +1.2 309,629 + +0.1 309,760 + +0.5 309,837 + QEN71_RS44150 0.13 +0.9 309,858 + QEN71_RS44150 0.14 -0.3 309,858 + QEN71_RS44150 0.14 +1.5 309,859 - QEN71_RS44150 0.14 -1.3 309,859 - QEN71_RS44150 0.14 +0.3 309,859 - QEN71_RS44150 0.14 -0.6 309,859 - QEN71_RS44150 0.14 -0.6 309,881 + QEN71_RS44150 0.16 +0.1 309,881 + QEN71_RS44150 0.16 -0.9 309,882 - QEN71_RS44150 0.16 -1.4 309,882 - QEN71_RS44150 0.16 -0.3 309,938 + QEN71_RS44150 0.19 -0.5 309,939 - QEN71_RS44150 0.19 -0.6 310,123 - QEN71_RS44150 0.31 -0.8 310,137 + QEN71_RS44150 0.31 -1.5 310,137 + QEN71_RS44150 0.31 -1.9 310,137 + QEN71_RS44150 0.31 -0.6 310,138 - QEN71_RS44150 0.32 -1.7 310,138 - QEN71_RS44150 0.32 -1.5 310,142 + QEN71_RS44150 0.32 +1.2 310,142 + QEN71_RS44150 0.32 -0.7 310,393 - QEN71_RS44150 0.47 -1.2 310,438 + QEN71_RS44150 0.50 +0.2 310,439 - QEN71_RS44150 0.50 +0.5 310,439 - QEN71_RS44150 0.50 -0.1 310,497 + QEN71_RS44150 0.54 +2.2 310,498 - QEN71_RS44150 0.54 -1.6 310,639 + QEN71_RS44150 0.62 +0.2 310,694 + QEN71_RS44150 0.66 -0.1 310,694 + QEN71_RS44150 0.66 -0.1 310,694 + QEN71_RS44150 0.66 -0.2 310,695 - QEN71_RS44150 0.66 -1.2 310,695 - QEN71_RS44150 0.66 -0.5 310,695 - QEN71_RS44150 0.66 +0.7 310,808 + QEN71_RS44150 0.73 -0.9 310,839 + QEN71_RS44150 0.75 +0.3 310,839 + QEN71_RS44150 0.75 -0.5 310,840 - QEN71_RS44150 0.75 -0.5 310,840 - QEN71_RS44150 0.75 -1.9 310,879 + QEN71_RS44150 0.77 +0.2 310,906 + QEN71_RS44150 0.79 -0.4 310,906 + QEN71_RS44150 0.79 +0.7 310,907 - QEN71_RS44150 0.79 -0.8 310,907 - QEN71_RS44150 0.79 -0.2 310,907 - QEN71_RS44150 0.79 -0.3 310,911 - QEN71_RS44150 0.79 -0.2 310,997 + QEN71_RS44150 0.84 -0.2 311,109 - +0.5 311,112 - +0.5 311,179 - +0.9 311,210 - +0.7 311,210 - -2.6 311,212 - +0.8 311,222 + +0.7 311,255 + +2.0 311,256 - -0.5 311,256 - -0.2 311,362 + QEN71_RS44155 0.12 +1.3 311,362 + QEN71_RS44155 0.12 -2.3 311,397 + QEN71_RS44155 0.16 -1.8 311,402 + QEN71_RS44155 0.17 -1.5 311,402 + QEN71_RS44155 0.17 +0.1 311,403 - QEN71_RS44155 0.17 -1.2 311,461 - QEN71_RS44155 0.23 -0.1 311,603 + QEN71_RS44155 0.40 +1.7 311,989 + QEN71_RS44155 0.84 +0.8 311,990 - QEN71_RS44155 0.84 +1.4 311,990 - QEN71_RS44155 0.84 -0.3 311,993 + QEN71_RS44155 0.84 -0.3 311,993 + QEN71_RS44155 0.84 +0.1 311,994 - QEN71_RS44155 0.84 -1.6 311,994 - QEN71_RS44155 0.84 +1.1 312,027 - QEN71_RS44155 0.88 +1.4 312,099 - +0.3 312,114 + +0.2 312,114 + -0.7 312,115 - -0.4 312,127 + -0.0 312,127 + +0.3 312,131 + -0.3 312,131 + -0.3 312,132 - -1.4 312,132 - -0.3
Or see this region's nucleotide sequence