Strain Fitness in Paraburkholderia sabiae LMG 24235 around QEN71_RS08825

Experiment: Motility_outer_sample_with_outgrowth

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Motility_outer_sample_with_outgrowth
1,981,682	+				-0.0
1,981,683	-				+0.0
1,981,877	+		QEN71_RS08820	0.33	-0.7
1,981,877	+		QEN71_RS08820	0.33	+1.8
1,981,877	+		QEN71_RS08820	0.33	-0.4
1,981,877	+		QEN71_RS08820	0.33	+1.0
1,981,877	+		QEN71_RS08820	0.33	-0.9
1,981,878	-		QEN71_RS08820	0.33	-1.6
1,981,878	-		QEN71_RS08820	0.33	-0.4
1,981,881	+		QEN71_RS08820	0.34	+0.5
1,981,881	+		QEN71_RS08820	0.34	+0.3
1,981,881	+		QEN71_RS08820	0.34	-2.6
1,981,881	+		QEN71_RS08820	0.34	-1.4
1,981,881	+		QEN71_RS08820	0.34	+0.4
1,981,881	+		QEN71_RS08820	0.34	-0.6
1,981,881	+		QEN71_RS08820	0.34	-1.5
1,981,882	-		QEN71_RS08820	0.34	-0.4
1,981,882	-		QEN71_RS08820	0.34	-0.2
1,981,882	-		QEN71_RS08820	0.34	+0.6
1,981,882	-		QEN71_RS08820	0.34	-1.9
1,981,882	-		QEN71_RS08820	0.34	-0.2
1,982,003	+		QEN71_RS08820	0.50	-0.8
1,982,024	+		QEN71_RS08820	0.53	+2.2
1,982,025	-		QEN71_RS08820	0.53	+0.9
1,982,025	-		QEN71_RS08820	0.53	+0.5
1,982,060	+		QEN71_RS08820	0.57	-1.0
1,982,061	-		QEN71_RS08820	0.58	+1.9
1,982,076	-		QEN71_RS08820	0.60	+1.4
1,982,177	+		QEN71_RS08820	0.73	-0.1
1,982,178	-		QEN71_RS08820	0.73	+0.1
1,982,178	-		QEN71_RS08820	0.73	+0.1
1,982,178	-		QEN71_RS08820	0.73	+0.4
1,982,178	-		QEN71_RS08820	0.73	-0.9
1,982,280	-		QEN71_RS08820	0.86	+0.8
1,982,299	+		QEN71_RS08820	0.89	-0.2
1,982,300	-		QEN71_RS08820	0.89	-0.5
1,982,372	+				-1.7
1,982,372	+				-1.9
1,982,373	-				-0.3
1,982,373	-				+1.0
1,982,450	+				-0.6
1,982,450	+				-0.4
1,982,451	-				-0.2
1,982,451	-				-0.6
1,982,451	-				+0.4
1,982,472	+				-1.1
1,982,473	-				-1.4
1,982,506	+				-0.8
1,982,506	+				-0.4
1,982,506	+				+0.0
1,982,506	+				-0.2
1,982,506	+				-2.2
1,982,507	-				-0.1
1,982,520	+				+0.2
1,982,520	+				-0.2
1,982,520	+				-0.2
1,982,520	+				+0.8
1,982,520	+				-0.8
1,982,520	+				+1.7
1,982,520	+				-1.9
1,982,520	+				-1.0
1,982,520	+				-0.1
1,982,521	-				+0.7
1,982,521	-				+2.3
1,982,521	-				-0.2
1,982,521	-				+0.6
1,982,521	-				+1.4
1,982,521	-				-2.0
1,982,521	-				+0.3
1,982,560	+				+0.7
1,982,560	+				-1.1
1,982,560	+				-2.6
1,982,560	+				-0.8
1,982,562	+				+1.8
1,982,562	+				+0.2
1,982,563	-				+0.7
1,982,563	-				+0.0
1,982,563	-				-1.2
1,982,563	-				-0.8
1,982,633	+				-0.7
1,982,633	+				+0.7
1,982,633	+				-0.2
1,982,633	+				-0.6
1,982,634	-				-0.5
1,982,634	-				+1.7
1,982,651	-				-1.0
1,982,654	+				+0.0
1,982,655	-		QEN71_RS08825	0.10	-0.4
1,982,655	-		QEN71_RS08825	0.10	-0.2
1,982,655	-		QEN71_RS08825	0.10	-1.2
1,982,655	-		QEN71_RS08825	0.10	-1.2
1,982,710	+		QEN71_RS08825	0.42	-0.3
1,982,813	+				-1.2
1,982,850	+				-0.2
1,982,850	+				-0.3
1,982,850	+				-1.2
1,982,850	+				-0.3
1,982,851	-				-0.3
1,982,851	-				-0.0
1,982,851	-				-0.3
1,982,851	-				-1.3
1,982,851	-				+0.7
1,982,851	-				-0.3
1,982,851	-				-0.4
1,982,851	-				-0.3
1,982,851	-				-0.3
1,982,969	+				+1.6
1,982,969	+				+1.9
1,982,969	+				+0.6
1,982,970	-				+0.1
1,982,970	-				+0.5
1,982,980	+				+0.0
1,982,981	-				-0.3
1,982,981	-				+0.6
1,982,982	+				-1.6
1,982,982	+				-0.6
1,982,982	+				-2.0
1,982,982	+				+0.5
1,982,982	+				-0.2
1,982,982	+				+0.3
1,982,982	+				-0.0
1,982,982	+				-0.6
1,982,982	+				-1.1
1,982,983	-				-0.3
1,982,983	-				-0.8
1,982,983	-				-0.9
1,982,983	-				-1.6
1,982,983	-				+0.6
1,982,983	-				+0.6
1,982,983	-				+0.4
1,982,983	-				+0.3
1,982,983	-				-0.1
1,982,983	-				-0.4
1,982,983	-				-0.6
1,983,012	+				-0.0
1,983,013	-				+0.4
1,983,013	-				+0.8
1,983,017	+				-0.3
1,983,017	+				-0.1
1,983,018	-				+0.0
1,983,018	-				+0.3
1,983,018	-				+1.6
1,983,031	+				-0.2
1,983,032	-				+0.1
1,983,032	-				+0.0
1,983,041	-				+0.2
1,983,050	+				-0.1
1,983,051	-				-0.6
1,983,051	-				-0.6
1,983,051	-				-1.0
1,983,052	+				-2.1
1,983,052	+				-0.3
1,983,053	-				-0.9
1,983,053	-				+0.5
1,983,053	-				+0.1
1,983,053	-				-1.2
1,983,053	-				+0.4
1,983,102	-				-0.7
1,983,168	+				-0.4
1,983,168	+				-2.0
1,983,169	+				-0.1
1,983,169	-				-0.3
1,983,169	-				+0.6
1,983,169	-				-0.8
1,983,169	-				-0.3
1,983,169	-				+0.6
1,983,169	-				-0.9
1,983,169	-				-0.6
1,983,170	+				-0.8
1,983,170	+				-2.0
1,983,170	+				+0.3
1,983,170	+				+0.1
1,983,170	+				+0.5
1,983,170	+				+1.1
1,983,171	-				-0.1
1,983,171	-				-0.1
1,983,171	-				-1.3
1,983,171	-				-0.6
1,983,171	-				-0.3
1,983,171	-				-0.8
1,983,171	-				-0.9
1,983,171	-				-1.3
1,983,272	+				-1.0
1,983,273	-				+0.3
1,983,273	-				+0.0
1,983,273	-				+1.2
1,983,273	-				-1.1
1,983,273	-				-0.8
1,983,273	-				+0.4
1,983,273	-				+0.4
1,983,288	+				-3.1
1,983,289	-				+1.4
1,983,289	-				-1.8
1,983,289	-				-0.4
1,983,340	+				+0.2
1,983,340	+				-0.1
1,983,340	+				-0.1
1,983,341	-				-0.2
1,983,394	+				+0.5
1,983,394	+				-1.2
1,983,394	+				-0.6
1,983,394	+				+0.4
1,983,403	-				+1.9
1,983,410	-				-1.8
1,983,413	+				-0.8
1,983,414	-				+0.2
1,983,414	-				+0.4
1,983,414	-				+1.4
1,983,452	+				-0.5
1,983,452	+				-0.4
1,983,453	-				+0.3
1,983,453	-				-0.9
1,983,453	-				-0.7
1,983,453	-				-0.1
1,983,453	-				-1.3
1,983,453	-				+0.8
1,983,457	-				-2.6
1,983,459	+				-0.5
1,983,460	-				-0.3
1,983,460	-				-0.4
1,983,460	-				-1.2
1,983,583	+				-1.5
1,983,669	+				-0.5
1,983,669	+				+0.8
1,983,669	+				-0.4
1,983,669	+				+0.0
1,983,669	+				+0.2
1,983,670	-				+0.3
1,983,670	-				-0.3
1,983,725	+				-0.3
1,983,725	+				-2.0
1,983,725	+				+0.2
1,983,725	+				+0.6
1,983,725	+				+0.0
1,983,726	-				+1.0
1,983,726	-				+0.4
1,983,726	-				-1.0
1,983,726	-				-1.0
1,983,726	-				+1.0
1,983,726	-				+0.3
1,983,741	+		QEN71_RS08830	0.11	+0.6
1,983,741	+		QEN71_RS08830	0.11	-0.5
1,983,742	-		QEN71_RS08830	0.11	-1.6
1,983,742	-		QEN71_RS08830	0.11	+0.0
1,983,742	-		QEN71_RS08830	0.11	-2.8
1,983,742	-		QEN71_RS08830	0.11	-0.3
1,983,742	-		QEN71_RS08830	0.11	+0.0
1,983,747	+		QEN71_RS08830	0.11	-0.3
1,983,747	+		QEN71_RS08830	0.11	+0.0
1,983,747	+		QEN71_RS08830	0.11	-1.2
1,983,747	+		QEN71_RS08830	0.11	+0.1
1,983,774	+		QEN71_RS08830	0.13	-0.1