Experiment: Motility_outer_sample_with_outgrowth
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS02690 and QEN71_RS02695 are separated by 306 nucleotides QEN71_RS02695 and QEN71_RS02700 are separated by 63 nucleotides QEN71_RS02700 and QEN71_RS02705 are separated by 121 nucleotides
QEN71_RS02690: QEN71_RS02690 - flavin reductase family protein, at 604,358 to 604,870
_RS02690
QEN71_RS02695: QEN71_RS02695 - peptide-methionine (S)-S-oxide reductase MsrA, at 605,177 to 605,722
_RS02695
QEN71_RS02700: QEN71_RS02700 - DUF72 domain-containing protein, at 605,786 to 606,868
_RS02700
QEN71_RS02705: QEN71_RS02705 - cyclopropane-fatty-acyl-phospholipid synthase family protein, at 606,990 to 608,204
_RS02705
Position (kb) 605
606
607 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 604.786 kb on + strand, within QEN71_RS02690 at 604.787 kb on - strand, within QEN71_RS02690 at 604.943 kb on + strand at 604.943 kb on + strand at 604.944 kb on - strand at 604.944 kb on - strand at 605.029 kb on + strand at 605.074 kb on + strand at 605.074 kb on + strand at 605.074 kb on + strand at 605.075 kb on - strand at 605.075 kb on - strand at 605.075 kb on - strand at 605.075 kb on - strand at 605.240 kb on + strand, within QEN71_RS02695 at 605.240 kb on + strand, within QEN71_RS02695 at 605.240 kb on + strand, within QEN71_RS02695 at 605.240 kb on + strand, within QEN71_RS02695 at 605.240 kb on + strand, within QEN71_RS02695 at 605.240 kb on + strand, within QEN71_RS02695 at 605.241 kb on - strand, within QEN71_RS02695 at 605.241 kb on - strand, within QEN71_RS02695 at 605.241 kb on - strand, within QEN71_RS02695 at 605.241 kb on - strand, within QEN71_RS02695 at 605.241 kb on - strand, within QEN71_RS02695 at 605.241 kb on - strand, within QEN71_RS02695 at 605.309 kb on + strand, within QEN71_RS02695 at 605.309 kb on + strand, within QEN71_RS02695 at 605.310 kb on - strand, within QEN71_RS02695 at 605.310 kb on - strand, within QEN71_RS02695 at 605.310 kb on - strand, within QEN71_RS02695 at 605.384 kb on + strand, within QEN71_RS02695 at 605.384 kb on + strand, within QEN71_RS02695 at 605.385 kb on - strand, within QEN71_RS02695 at 605.434 kb on + strand, within QEN71_RS02695 at 605.434 kb on + strand, within QEN71_RS02695 at 605.434 kb on + strand, within QEN71_RS02695 at 605.435 kb on - strand, within QEN71_RS02695 at 605.549 kb on + strand, within QEN71_RS02695 at 605.549 kb on + strand, within QEN71_RS02695 at 605.549 kb on + strand, within QEN71_RS02695 at 605.549 kb on + strand, within QEN71_RS02695 at 605.549 kb on + strand, within QEN71_RS02695 at 605.549 kb on + strand, within QEN71_RS02695 at 605.549 kb on + strand, within QEN71_RS02695 at 605.549 kb on + strand, within QEN71_RS02695 at 605.549 kb on + strand, within QEN71_RS02695 at 605.550 kb on - strand, within QEN71_RS02695 at 605.550 kb on - strand, within QEN71_RS02695 at 605.550 kb on - strand, within QEN71_RS02695 at 605.550 kb on - strand, within QEN71_RS02695 at 605.550 kb on - strand, within QEN71_RS02695 at 605.594 kb on + strand, within QEN71_RS02695 at 605.594 kb on + strand, within QEN71_RS02695 at 605.594 kb on + strand, within QEN71_RS02695 at 605.594 kb on + strand, within QEN71_RS02695 at 605.594 kb on + strand, within QEN71_RS02695 at 605.594 kb on + strand, within QEN71_RS02695 at 605.594 kb on + strand, within QEN71_RS02695 at 605.594 kb on + strand, within QEN71_RS02695 at 605.594 kb on + strand, within QEN71_RS02695 at 605.595 kb on - strand, within QEN71_RS02695 at 605.595 kb on - strand, within QEN71_RS02695 at 605.595 kb on - strand, within QEN71_RS02695 at 605.595 kb on - strand, within QEN71_RS02695 at 605.595 kb on - strand, within QEN71_RS02695 at 605.595 kb on - strand, within QEN71_RS02695 at 605.595 kb on - strand, within QEN71_RS02695 at 605.595 kb on - strand, within QEN71_RS02695 at 605.612 kb on + strand, within QEN71_RS02695 at 605.613 kb on - strand, within QEN71_RS02695 at 605.613 kb on - strand, within QEN71_RS02695 at 605.624 kb on + strand, within QEN71_RS02695 at 605.624 kb on + strand, within QEN71_RS02695 at 605.624 kb on + strand, within QEN71_RS02695 at 605.624 kb on + strand, within QEN71_RS02695 at 605.624 kb on + strand, within QEN71_RS02695 at 605.625 kb on - strand, within QEN71_RS02695 at 605.625 kb on - strand, within QEN71_RS02695 at 605.625 kb on - strand, within QEN71_RS02695 at 605.625 kb on - strand, within QEN71_RS02695 at 605.625 kb on - strand, within QEN71_RS02695 at 605.625 kb on - strand, within QEN71_RS02695 at 605.651 kb on + strand, within QEN71_RS02695 at 605.651 kb on + strand, within QEN71_RS02695 at 605.651 kb on + strand, within QEN71_RS02695 at 605.651 kb on + strand, within QEN71_RS02695 at 605.651 kb on + strand, within QEN71_RS02695 at 605.651 kb on + strand, within QEN71_RS02695 at 605.725 kb on + strand at 605.725 kb on + strand at 605.725 kb on + strand at 605.725 kb on + strand at 605.725 kb on + strand at 605.725 kb on + strand at 605.725 kb on + strand at 605.725 kb on + strand at 605.725 kb on + strand at 605.725 kb on + strand at 605.725 kb on + strand at 605.725 kb on + strand at 605.725 kb on + strand at 605.725 kb on + strand at 605.725 kb on + strand at 605.726 kb on - strand at 605.726 kb on - strand at 605.726 kb on - strand at 605.726 kb on - strand at 605.726 kb on - strand at 605.726 kb on - strand at 605.726 kb on - strand at 605.726 kb on - strand at 605.726 kb on - strand at 605.726 kb on - strand at 605.726 kb on - strand at 605.726 kb on - strand at 605.726 kb on - strand at 605.726 kb on - strand at 605.787 kb on + strand at 606.009 kb on + strand, within QEN71_RS02700 at 606.010 kb on - strand, within QEN71_RS02700 at 606.010 kb on - strand, within QEN71_RS02700 at 606.010 kb on - strand, within QEN71_RS02700 at 606.010 kb on - strand, within QEN71_RS02700 at 606.010 kb on - strand, within QEN71_RS02700 at 606.031 kb on - strand, within QEN71_RS02700 at 606.031 kb on - strand, within QEN71_RS02700 at 606.031 kb on - strand, within QEN71_RS02700 at 606.031 kb on - strand, within QEN71_RS02700 at 606.153 kb on + strand, within QEN71_RS02700 at 606.154 kb on - strand, within QEN71_RS02700 at 606.228 kb on + strand, within QEN71_RS02700 at 606.229 kb on - strand, within QEN71_RS02700 at 606.229 kb on - strand, within QEN71_RS02700 at 606.229 kb on - strand, within QEN71_RS02700 at 606.229 kb on - strand, within QEN71_RS02700 at 606.528 kb on + strand, within QEN71_RS02700 at 606.529 kb on - strand, within QEN71_RS02700 at 606.538 kb on - strand, within QEN71_RS02700 at 606.538 kb on - strand, within QEN71_RS02700 at 606.538 kb on - strand, within QEN71_RS02700 at 606.538 kb on - strand, within QEN71_RS02700 at 606.538 kb on - strand, within QEN71_RS02700 at 606.561 kb on + strand, within QEN71_RS02700 at 606.561 kb on + strand, within QEN71_RS02700 at 606.562 kb on - strand, within QEN71_RS02700 at 606.562 kb on - strand, within QEN71_RS02700 at 606.648 kb on + strand, within QEN71_RS02700 at 606.649 kb on - strand, within QEN71_RS02700 at 606.649 kb on - strand, within QEN71_RS02700 at 606.660 kb on + strand, within QEN71_RS02700 at 606.700 kb on + strand, within QEN71_RS02700 at 606.700 kb on + strand, within QEN71_RS02700 at 606.700 kb on + strand, within QEN71_RS02700 at 606.701 kb on - strand, within QEN71_RS02700 at 606.991 kb on + strand at 607.006 kb on + strand at 607.006 kb on + strand at 607.006 kb on + strand at 607.006 kb on + strand at 607.006 kb on + strand at 607.007 kb on - strand at 607.007 kb on - strand at 607.007 kb on - strand at 607.007 kb on - strand at 607.062 kb on + strand at 607.062 kb on + strand at 607.063 kb on - strand at 607.063 kb on - strand at 607.072 kb on + strand at 607.072 kb on + strand at 607.073 kb on - strand at 607.073 kb on - strand at 607.073 kb on - strand at 607.073 kb on - strand at 607.073 kb on - strand at 607.073 kb on - strand at 607.103 kb on - strand at 607.103 kb on - strand at 607.103 kb on - strand at 607.120 kb on + strand, within QEN71_RS02705 at 607.120 kb on + strand, within QEN71_RS02705 at 607.120 kb on + strand, within QEN71_RS02705 at 607.121 kb on - strand, within QEN71_RS02705 at 607.121 kb on - strand, within QEN71_RS02705 at 607.121 kb on - strand, within QEN71_RS02705 at 607.121 kb on - strand, within QEN71_RS02705 at 607.121 kb on - strand, within QEN71_RS02705 at 607.134 kb on - strand, within QEN71_RS02705 at 607.219 kb on + strand, within QEN71_RS02705 at 607.219 kb on + strand, within QEN71_RS02705 at 607.220 kb on - strand, within QEN71_RS02705 at 607.220 kb on - strand, within QEN71_RS02705 at 607.220 kb on - strand, within QEN71_RS02705 at 607.321 kb on + strand, within QEN71_RS02705 at 607.321 kb on + strand, within QEN71_RS02705 at 607.321 kb on + strand, within QEN71_RS02705 at 607.322 kb on - strand, within QEN71_RS02705 at 607.322 kb on - strand, within QEN71_RS02705 at 607.322 kb on - strand, within QEN71_RS02705 at 607.322 kb on - strand, within QEN71_RS02705 at 607.322 kb on - strand, within QEN71_RS02705 at 607.441 kb on + strand, within QEN71_RS02705 at 607.441 kb on + strand, within QEN71_RS02705 at 607.441 kb on + strand, within QEN71_RS02705 at 607.442 kb on - strand, within QEN71_RS02705 at 607.523 kb on - strand, within QEN71_RS02705 at 607.780 kb on + strand, within QEN71_RS02705 at 607.781 kb on - strand, within QEN71_RS02705 at 607.792 kb on + strand, within QEN71_RS02705 at 607.792 kb on + strand, within QEN71_RS02705 at 607.792 kb on + strand, within QEN71_RS02705 at 607.793 kb on - strand, within QEN71_RS02705 at 607.793 kb on - strand, within QEN71_RS02705 at 607.793 kb on - strand, within QEN71_RS02705 at 607.793 kb on - strand, within QEN71_RS02705 at 607.793 kb on - strand, within QEN71_RS02705 at 607.822 kb on + strand, within QEN71_RS02705 at 607.822 kb on + strand, within QEN71_RS02705 at 607.823 kb on - strand, within QEN71_RS02705 at 607.823 kb on - strand, within QEN71_RS02705 at 607.823 kb on - strand, within QEN71_RS02705 at 607.823 kb on - strand, within QEN71_RS02705 at 607.843 kb on + strand, within QEN71_RS02705 at 607.843 kb on + strand, within QEN71_RS02705 at 607.844 kb on - strand, within QEN71_RS02705 at 607.844 kb on - strand, within QEN71_RS02705 at 607.844 kb on - strand, within QEN71_RS02705 at 607.844 kb on - strand, within QEN71_RS02705 at 607.844 kb on - strand, within QEN71_RS02705 at 607.844 kb on - strand, within QEN71_RS02705 at 607.850 kb on - strand, within QEN71_RS02705
Per-strain Table
Position Strand Gene LocusTag Fraction Motility_outer_sample_with_outgrowth remove 604,786 + QEN71_RS02690 0.83 -0.2 604,787 - QEN71_RS02690 0.84 +2.3 604,943 + -0.3 604,943 + +0.9 604,944 - +0.8 604,944 - -0.1 605,029 + +0.2 605,074 + -2.2 605,074 + +0.7 605,074 + -0.3 605,075 - -0.4 605,075 - +0.2 605,075 - -1.6 605,075 - +1.0 605,240 + QEN71_RS02695 0.12 -1.8 605,240 + QEN71_RS02695 0.12 +0.5 605,240 + QEN71_RS02695 0.12 +0.2 605,240 + QEN71_RS02695 0.12 -0.2 605,240 + QEN71_RS02695 0.12 +1.1 605,240 + QEN71_RS02695 0.12 -0.0 605,241 - QEN71_RS02695 0.12 -0.9 605,241 - QEN71_RS02695 0.12 -0.5 605,241 - QEN71_RS02695 0.12 -1.8 605,241 - QEN71_RS02695 0.12 -0.4 605,241 - QEN71_RS02695 0.12 +0.7 605,241 - QEN71_RS02695 0.12 +0.5 605,309 + QEN71_RS02695 0.24 +0.6 605,309 + QEN71_RS02695 0.24 -0.1 605,310 - QEN71_RS02695 0.24 -1.2 605,310 - QEN71_RS02695 0.24 -0.0 605,310 - QEN71_RS02695 0.24 -0.1 605,384 + QEN71_RS02695 0.38 +0.1 605,384 + QEN71_RS02695 0.38 +3.2 605,385 - QEN71_RS02695 0.38 -2.0 605,434 + QEN71_RS02695 0.47 -1.4 605,434 + QEN71_RS02695 0.47 -0.1 605,434 + QEN71_RS02695 0.47 -0.2 605,435 - QEN71_RS02695 0.47 -0.1 605,549 + QEN71_RS02695 0.68 +0.3 605,549 + QEN71_RS02695 0.68 +0.5 605,549 + QEN71_RS02695 0.68 -0.5 605,549 + QEN71_RS02695 0.68 -0.2 605,549 + QEN71_RS02695 0.68 -0.7 605,549 + QEN71_RS02695 0.68 -1.6 605,549 + QEN71_RS02695 0.68 +0.7 605,549 + QEN71_RS02695 0.68 +1.3 605,549 + QEN71_RS02695 0.68 -2.2 605,550 - QEN71_RS02695 0.68 +0.7 605,550 - QEN71_RS02695 0.68 +0.5 605,550 - QEN71_RS02695 0.68 +0.3 605,550 - QEN71_RS02695 0.68 -0.1 605,550 - QEN71_RS02695 0.68 -0.9 605,594 + QEN71_RS02695 0.76 -0.3 605,594 + QEN71_RS02695 0.76 -0.9 605,594 + QEN71_RS02695 0.76 -1.1 605,594 + QEN71_RS02695 0.76 -0.1 605,594 + QEN71_RS02695 0.76 -1.8 605,594 + QEN71_RS02695 0.76 -0.5 605,594 + QEN71_RS02695 0.76 +0.3 605,594 + QEN71_RS02695 0.76 -0.1 605,594 + QEN71_RS02695 0.76 -1.0 605,595 - QEN71_RS02695 0.77 +0.7 605,595 - QEN71_RS02695 0.77 -0.1 605,595 - QEN71_RS02695 0.77 -1.0 605,595 - QEN71_RS02695 0.77 -0.5 605,595 - QEN71_RS02695 0.77 -0.0 605,595 - QEN71_RS02695 0.77 -0.6 605,595 - QEN71_RS02695 0.77 -0.7 605,595 - QEN71_RS02695 0.77 +0.2 605,612 + QEN71_RS02695 0.80 +1.5 605,613 - QEN71_RS02695 0.80 -0.1 605,613 - QEN71_RS02695 0.80 +0.5 605,624 + QEN71_RS02695 0.82 -1.3 605,624 + QEN71_RS02695 0.82 +0.3 605,624 + QEN71_RS02695 0.82 -0.6 605,624 + QEN71_RS02695 0.82 -0.1 605,624 + QEN71_RS02695 0.82 -0.3 605,625 - QEN71_RS02695 0.82 +0.2 605,625 - QEN71_RS02695 0.82 -0.2 605,625 - QEN71_RS02695 0.82 -0.0 605,625 - QEN71_RS02695 0.82 +0.1 605,625 - QEN71_RS02695 0.82 +0.5 605,625 - QEN71_RS02695 0.82 -0.7 605,651 + QEN71_RS02695 0.87 -3.0 605,651 + QEN71_RS02695 0.87 -0.3 605,651 + QEN71_RS02695 0.87 -0.1 605,651 + QEN71_RS02695 0.87 -0.1 605,651 + QEN71_RS02695 0.87 -0.0 605,651 + QEN71_RS02695 0.87 -0.4 605,725 + -0.9 605,725 + +0.4 605,725 + +0.9 605,725 + +1.5 605,725 + +0.8 605,725 + -0.4 605,725 + +1.1 605,725 + -0.9 605,725 + -1.4 605,725 + +0.3 605,725 + +0.3 605,725 + +0.4 605,725 + -0.6 605,725 + +0.1 605,725 + +1.9 605,726 - +0.3 605,726 - +0.2 605,726 - -1.2 605,726 - -0.7 605,726 - -0.1 605,726 - -0.1 605,726 - +0.2 605,726 - -1.1 605,726 - -0.2 605,726 - +2.2 605,726 - -0.5 605,726 - -0.2 605,726 - -1.2 605,726 - +0.5 605,787 + -1.5 606,009 + QEN71_RS02700 0.21 -0.0 606,010 - QEN71_RS02700 0.21 -2.7 606,010 - QEN71_RS02700 0.21 -1.5 606,010 - QEN71_RS02700 0.21 -1.7 606,010 - QEN71_RS02700 0.21 -2.2 606,010 - QEN71_RS02700 0.21 +0.4 606,031 - QEN71_RS02700 0.23 -0.9 606,031 - QEN71_RS02700 0.23 -0.2 606,031 - QEN71_RS02700 0.23 +0.4 606,031 - QEN71_RS02700 0.23 -0.7 606,153 + QEN71_RS02700 0.34 +0.1 606,154 - QEN71_RS02700 0.34 -1.5 606,228 + QEN71_RS02700 0.41 -0.1 606,229 - QEN71_RS02700 0.41 +0.3 606,229 - QEN71_RS02700 0.41 -1.7 606,229 - QEN71_RS02700 0.41 +0.1 606,229 - QEN71_RS02700 0.41 -0.1 606,528 + QEN71_RS02700 0.69 +0.1 606,529 - QEN71_RS02700 0.69 -0.3 606,538 - QEN71_RS02700 0.69 +1.4 606,538 - QEN71_RS02700 0.69 +2.1 606,538 - QEN71_RS02700 0.69 -0.7 606,538 - QEN71_RS02700 0.69 +0.8 606,538 - QEN71_RS02700 0.69 -1.1 606,561 + QEN71_RS02700 0.72 -0.5 606,561 + QEN71_RS02700 0.72 -0.1 606,562 - QEN71_RS02700 0.72 -0.2 606,562 - QEN71_RS02700 0.72 -2.5 606,648 + QEN71_RS02700 0.80 -0.5 606,649 - QEN71_RS02700 0.80 -0.9 606,649 - QEN71_RS02700 0.80 +1.4 606,660 + QEN71_RS02700 0.81 +1.9 606,700 + QEN71_RS02700 0.84 +0.6 606,700 + QEN71_RS02700 0.84 -0.3 606,700 + QEN71_RS02700 0.84 +0.1 606,701 - QEN71_RS02700 0.84 +0.4 606,991 + -0.7 607,006 + -1.1 607,006 + -0.7 607,006 + +1.5 607,006 + -0.5 607,006 + +1.1 607,007 - -0.2 607,007 - +0.4 607,007 - -0.2 607,007 - +0.5 607,062 + +0.5 607,062 + -1.3 607,063 - -0.1 607,063 - -0.3 607,072 + -0.5 607,072 + +0.9 607,073 - -0.5 607,073 - +0.3 607,073 - +0.3 607,073 - -0.1 607,073 - +0.1 607,073 - +0.9 607,103 - +1.5 607,103 - -0.2 607,103 - -1.1 607,120 + QEN71_RS02705 0.11 +1.2 607,120 + QEN71_RS02705 0.11 -2.0 607,120 + QEN71_RS02705 0.11 -0.0 607,121 - QEN71_RS02705 0.11 -0.3 607,121 - QEN71_RS02705 0.11 -0.0 607,121 - QEN71_RS02705 0.11 -0.8 607,121 - QEN71_RS02705 0.11 +0.1 607,121 - QEN71_RS02705 0.11 +0.1 607,134 - QEN71_RS02705 0.12 +0.9 607,219 + QEN71_RS02705 0.19 -1.2 607,219 + QEN71_RS02705 0.19 +0.5 607,220 - QEN71_RS02705 0.19 +1.0 607,220 - QEN71_RS02705 0.19 -1.5 607,220 - QEN71_RS02705 0.19 +1.9 607,321 + QEN71_RS02705 0.27 -0.9 607,321 + QEN71_RS02705 0.27 -0.6 607,321 + QEN71_RS02705 0.27 -0.8 607,322 - QEN71_RS02705 0.27 -0.9 607,322 - QEN71_RS02705 0.27 -1.0 607,322 - QEN71_RS02705 0.27 +0.7 607,322 - QEN71_RS02705 0.27 -1.1 607,322 - QEN71_RS02705 0.27 -0.0 607,441 + QEN71_RS02705 0.37 +0.5 607,441 + QEN71_RS02705 0.37 +0.3 607,441 + QEN71_RS02705 0.37 +2.0 607,442 - QEN71_RS02705 0.37 -2.0 607,523 - QEN71_RS02705 0.44 +0.1 607,780 + QEN71_RS02705 0.65 -0.9 607,781 - QEN71_RS02705 0.65 +0.5 607,792 + QEN71_RS02705 0.66 -1.1 607,792 + QEN71_RS02705 0.66 +0.4 607,792 + QEN71_RS02705 0.66 -1.0 607,793 - QEN71_RS02705 0.66 +2.5 607,793 - QEN71_RS02705 0.66 -0.1 607,793 - QEN71_RS02705 0.66 +0.2 607,793 - QEN71_RS02705 0.66 +1.3 607,793 - QEN71_RS02705 0.66 +0.2 607,822 + QEN71_RS02705 0.68 -0.1 607,822 + QEN71_RS02705 0.68 -0.2 607,823 - QEN71_RS02705 0.69 +0.8 607,823 - QEN71_RS02705 0.69 +1.9 607,823 - QEN71_RS02705 0.69 -0.3 607,823 - QEN71_RS02705 0.69 +0.2 607,843 + QEN71_RS02705 0.70 +0.3 607,843 + QEN71_RS02705 0.70 -0.2 607,844 - QEN71_RS02705 0.70 -0.7 607,844 - QEN71_RS02705 0.70 +0.5 607,844 - QEN71_RS02705 0.70 -0.7 607,844 - QEN71_RS02705 0.70 +0.3 607,844 - QEN71_RS02705 0.70 -0.6 607,844 - QEN71_RS02705 0.70 -0.1 607,850 - QEN71_RS02705 0.71 +0.2
Or see this region's nucleotide sequence