Experiment: Motility_outer_sample_with_outgrowth
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS00565 and QEN71_RS00570 are separated by 226 nucleotides QEN71_RS00570 and QEN71_RS00575 are separated by 292 nucleotides
QEN71_RS00565: QEN71_RS00565 - AAA family ATPase, at 122,036 to 123,013
_RS00565
QEN71_RS00570: QEN71_RS00570 - DUF4148 domain-containing protein, at 123,240 to 123,527
_RS00570
QEN71_RS00575: QEN71_RS00575 - NAD(P)/FAD-dependent oxidoreductase, at 123,820 to 124,926
_RS00575
Position (kb) 123
124 Strain fitness (log2 ratio) -2
-1
0
1
2 at 122.408 kb on + strand, within QEN71_RS00565 at 122.408 kb on + strand, within QEN71_RS00565 at 122.409 kb on - strand, within QEN71_RS00565 at 122.409 kb on - strand, within QEN71_RS00565 at 122.409 kb on - strand, within QEN71_RS00565 at 122.414 kb on + strand, within QEN71_RS00565 at 122.414 kb on + strand, within QEN71_RS00565 at 122.414 kb on + strand, within QEN71_RS00565 at 122.414 kb on + strand, within QEN71_RS00565 at 122.414 kb on + strand, within QEN71_RS00565 at 122.414 kb on + strand, within QEN71_RS00565 at 122.414 kb on + strand, within QEN71_RS00565 at 122.415 kb on - strand, within QEN71_RS00565 at 122.415 kb on - strand, within QEN71_RS00565 at 122.415 kb on - strand, within QEN71_RS00565 at 122.415 kb on - strand, within QEN71_RS00565 at 122.415 kb on - strand, within QEN71_RS00565 at 122.415 kb on - strand, within QEN71_RS00565 at 122.415 kb on - strand, within QEN71_RS00565 at 122.415 kb on - strand, within QEN71_RS00565 at 122.415 kb on - strand, within QEN71_RS00565 at 122.415 kb on - strand, within QEN71_RS00565 at 122.522 kb on + strand, within QEN71_RS00565 at 122.522 kb on + strand, within QEN71_RS00565 at 122.522 kb on + strand, within QEN71_RS00565 at 122.522 kb on + strand, within QEN71_RS00565 at 122.522 kb on + strand, within QEN71_RS00565 at 122.522 kb on + strand, within QEN71_RS00565 at 122.523 kb on - strand, within QEN71_RS00565 at 122.523 kb on - strand, within QEN71_RS00565 at 122.523 kb on - strand, within QEN71_RS00565 at 122.579 kb on + strand, within QEN71_RS00565 at 122.579 kb on + strand, within QEN71_RS00565 at 122.579 kb on + strand, within QEN71_RS00565 at 122.579 kb on + strand, within QEN71_RS00565 at 122.580 kb on - strand, within QEN71_RS00565 at 122.580 kb on - strand, within QEN71_RS00565 at 122.580 kb on - strand, within QEN71_RS00565 at 122.600 kb on + strand, within QEN71_RS00565 at 122.600 kb on + strand, within QEN71_RS00565 at 122.600 kb on + strand, within QEN71_RS00565 at 122.601 kb on - strand, within QEN71_RS00565 at 122.601 kb on - strand, within QEN71_RS00565 at 122.601 kb on - strand, within QEN71_RS00565 at 122.601 kb on - strand, within QEN71_RS00565 at 122.744 kb on + strand, within QEN71_RS00565 at 122.744 kb on + strand, within QEN71_RS00565 at 122.799 kb on - strand, within QEN71_RS00565 at 122.799 kb on - strand, within QEN71_RS00565 at 122.981 kb on + strand at 122.981 kb on + strand at 122.982 kb on - strand at 122.982 kb on - strand at 122.982 kb on - strand at 123.075 kb on - strand at 123.075 kb on - strand at 123.075 kb on - strand at 123.082 kb on + strand at 123.115 kb on + strand at 123.115 kb on + strand at 123.116 kb on - strand at 123.170 kb on + strand at 123.170 kb on + strand at 123.170 kb on + strand at 123.171 kb on - strand at 123.171 kb on - strand at 123.171 kb on - strand at 123.171 kb on - strand at 123.171 kb on - strand at 123.171 kb on - strand at 123.181 kb on + strand at 123.182 kb on - strand at 123.182 kb on - strand at 123.182 kb on - strand at 123.463 kb on - strand, within QEN71_RS00570 at 123.463 kb on - strand, within QEN71_RS00570 at 123.463 kb on - strand, within QEN71_RS00570 at 123.464 kb on + strand, within QEN71_RS00570 at 123.464 kb on + strand, within QEN71_RS00570 at 123.464 kb on + strand, within QEN71_RS00570 at 123.464 kb on + strand, within QEN71_RS00570 at 123.464 kb on + strand, within QEN71_RS00570 at 123.464 kb on + strand, within QEN71_RS00570 at 123.464 kb on + strand, within QEN71_RS00570 at 123.464 kb on + strand, within QEN71_RS00570 at 123.464 kb on + strand, within QEN71_RS00570 at 123.464 kb on + strand, within QEN71_RS00570 at 123.464 kb on + strand, within QEN71_RS00570 at 123.464 kb on + strand, within QEN71_RS00570 at 123.465 kb on - strand, within QEN71_RS00570 at 123.465 kb on - strand, within QEN71_RS00570 at 123.465 kb on - strand, within QEN71_RS00570 at 123.465 kb on - strand, within QEN71_RS00570 at 123.465 kb on - strand, within QEN71_RS00570 at 123.465 kb on - strand, within QEN71_RS00570 at 123.465 kb on - strand, within QEN71_RS00570 at 123.465 kb on - strand, within QEN71_RS00570 at 123.605 kb on + strand at 123.605 kb on + strand at 123.606 kb on - strand at 123.638 kb on + strand at 123.638 kb on + strand at 123.638 kb on + strand at 123.638 kb on + strand at 123.638 kb on + strand at 123.638 kb on + strand at 123.638 kb on + strand at 123.638 kb on + strand at 123.638 kb on + strand at 123.638 kb on + strand at 123.638 kb on + strand at 123.638 kb on + strand at 123.638 kb on + strand at 123.638 kb on + strand at 123.638 kb on + strand at 123.638 kb on + strand at 123.639 kb on - strand at 123.639 kb on - strand at 123.639 kb on - strand at 123.639 kb on - strand at 123.639 kb on - strand at 123.639 kb on - strand at 123.639 kb on - strand at 123.639 kb on - strand at 123.639 kb on - strand at 123.639 kb on - strand at 123.639 kb on - strand at 123.639 kb on - strand at 123.639 kb on - strand at 123.786 kb on + strand at 123.786 kb on + strand at 123.786 kb on + strand at 123.786 kb on + strand at 123.786 kb on + strand at 123.786 kb on + strand at 123.787 kb on - strand at 123.968 kb on + strand, within QEN71_RS00575 at 123.968 kb on + strand, within QEN71_RS00575 at 123.968 kb on + strand, within QEN71_RS00575 at 123.968 kb on + strand, within QEN71_RS00575 at 123.968 kb on + strand, within QEN71_RS00575 at 123.968 kb on + strand, within QEN71_RS00575 at 123.969 kb on - strand, within QEN71_RS00575 at 123.969 kb on - strand, within QEN71_RS00575 at 123.982 kb on + strand, within QEN71_RS00575 at 123.982 kb on + strand, within QEN71_RS00575 at 123.982 kb on + strand, within QEN71_RS00575 at 123.982 kb on + strand, within QEN71_RS00575 at 123.982 kb on + strand, within QEN71_RS00575 at 123.982 kb on + strand, within QEN71_RS00575 at 123.982 kb on + strand, within QEN71_RS00575 at 123.982 kb on + strand, within QEN71_RS00575 at 123.982 kb on + strand, within QEN71_RS00575 at 123.982 kb on + strand, within QEN71_RS00575 at 123.982 kb on + strand, within QEN71_RS00575 at 123.982 kb on + strand, within QEN71_RS00575 at 123.982 kb on + strand, within QEN71_RS00575 at 123.982 kb on + strand, within QEN71_RS00575 at 123.982 kb on + strand, within QEN71_RS00575 at 123.982 kb on + strand, within QEN71_RS00575 at 123.982 kb on + strand, within QEN71_RS00575 at 123.982 kb on + strand, within QEN71_RS00575 at 123.983 kb on - strand, within QEN71_RS00575 at 123.983 kb on - strand, within QEN71_RS00575 at 123.983 kb on - strand, within QEN71_RS00575 at 123.983 kb on - strand, within QEN71_RS00575 at 123.983 kb on - strand, within QEN71_RS00575 at 123.983 kb on - strand, within QEN71_RS00575 at 123.983 kb on - strand, within QEN71_RS00575 at 123.983 kb on - strand, within QEN71_RS00575 at 123.983 kb on - strand, within QEN71_RS00575 at 123.983 kb on - strand, within QEN71_RS00575 at 123.983 kb on - strand, within QEN71_RS00575 at 123.983 kb on - strand, within QEN71_RS00575 at 123.983 kb on - strand, within QEN71_RS00575 at 123.983 kb on - strand, within QEN71_RS00575 at 123.983 kb on - strand, within QEN71_RS00575 at 123.983 kb on - strand, within QEN71_RS00575 at 123.983 kb on - strand, within QEN71_RS00575 at 123.983 kb on - strand, within QEN71_RS00575 at 123.983 kb on - strand, within QEN71_RS00575 at 123.983 kb on - strand, within QEN71_RS00575 at 123.986 kb on - strand, within QEN71_RS00575 at 124.039 kb on + strand, within QEN71_RS00575 at 124.039 kb on + strand, within QEN71_RS00575 at 124.039 kb on + strand, within QEN71_RS00575 at 124.039 kb on + strand, within QEN71_RS00575 at 124.039 kb on + strand, within QEN71_RS00575 at 124.040 kb on - strand, within QEN71_RS00575 at 124.045 kb on + strand, within QEN71_RS00575 at 124.046 kb on - strand, within QEN71_RS00575 at 124.046 kb on - strand, within QEN71_RS00575 at 124.496 kb on - strand, within QEN71_RS00575 at 124.513 kb on + strand, within QEN71_RS00575 at 124.513 kb on + strand, within QEN71_RS00575 at 124.513 kb on + strand, within QEN71_RS00575 at 124.513 kb on + strand, within QEN71_RS00575 at 124.513 kb on + strand, within QEN71_RS00575 at 124.513 kb on + strand, within QEN71_RS00575 at 124.514 kb on - strand, within QEN71_RS00575 at 124.514 kb on - strand, within QEN71_RS00575 at 124.514 kb on - strand, within QEN71_RS00575 at 124.514 kb on - strand, within QEN71_RS00575 at 124.514 kb on - strand, within QEN71_RS00575 at 124.514 kb on - strand, within QEN71_RS00575
Per-strain Table
Position Strand Gene LocusTag Fraction Motility_outer_sample_with_outgrowth remove 122,408 + QEN71_RS00565 0.38 +0.6 122,408 + QEN71_RS00565 0.38 +0.2 122,409 - QEN71_RS00565 0.38 +0.0 122,409 - QEN71_RS00565 0.38 -0.1 122,409 - QEN71_RS00565 0.38 +0.7 122,414 + QEN71_RS00565 0.39 +1.0 122,414 + QEN71_RS00565 0.39 -0.0 122,414 + QEN71_RS00565 0.39 -1.3 122,414 + QEN71_RS00565 0.39 +0.7 122,414 + QEN71_RS00565 0.39 -0.1 122,414 + QEN71_RS00565 0.39 -1.5 122,414 + QEN71_RS00565 0.39 -0.3 122,415 - QEN71_RS00565 0.39 -1.6 122,415 - QEN71_RS00565 0.39 +0.2 122,415 - QEN71_RS00565 0.39 -0.1 122,415 - QEN71_RS00565 0.39 -0.1 122,415 - QEN71_RS00565 0.39 -0.6 122,415 - QEN71_RS00565 0.39 -0.6 122,415 - QEN71_RS00565 0.39 -0.6 122,415 - QEN71_RS00565 0.39 +0.1 122,415 - QEN71_RS00565 0.39 +0.1 122,415 - QEN71_RS00565 0.39 -1.6 122,522 + QEN71_RS00565 0.50 -1.1 122,522 + QEN71_RS00565 0.50 -1.1 122,522 + QEN71_RS00565 0.50 +0.2 122,522 + QEN71_RS00565 0.50 -0.3 122,522 + QEN71_RS00565 0.50 -0.6 122,522 + QEN71_RS00565 0.50 -0.3 122,523 - QEN71_RS00565 0.50 -0.4 122,523 - QEN71_RS00565 0.50 -0.4 122,523 - QEN71_RS00565 0.50 +1.7 122,579 + QEN71_RS00565 0.56 +0.1 122,579 + QEN71_RS00565 0.56 -0.6 122,579 + QEN71_RS00565 0.56 +0.3 122,579 + QEN71_RS00565 0.56 -1.0 122,580 - QEN71_RS00565 0.56 +0.1 122,580 - QEN71_RS00565 0.56 -0.1 122,580 - QEN71_RS00565 0.56 -0.2 122,600 + QEN71_RS00565 0.58 -0.9 122,600 + QEN71_RS00565 0.58 +0.1 122,600 + QEN71_RS00565 0.58 -0.2 122,601 - QEN71_RS00565 0.58 -0.3 122,601 - QEN71_RS00565 0.58 +0.8 122,601 - QEN71_RS00565 0.58 +0.2 122,601 - QEN71_RS00565 0.58 +0.3 122,744 + QEN71_RS00565 0.72 +0.2 122,744 + QEN71_RS00565 0.72 -0.5 122,799 - QEN71_RS00565 0.78 -0.5 122,799 - QEN71_RS00565 0.78 -1.1 122,981 + +0.3 122,981 + -0.0 122,982 - +0.5 122,982 - +1.4 122,982 - -1.7 123,075 - +0.4 123,075 - +0.1 123,075 - +0.4 123,082 + +1.5 123,115 + -0.4 123,115 + +0.7 123,116 - +0.4 123,170 + +0.0 123,170 + -1.7 123,170 + -2.0 123,171 - -0.8 123,171 - +1.0 123,171 - -0.1 123,171 - +0.2 123,171 - +0.0 123,171 - +1.5 123,181 + +0.9 123,182 - -0.3 123,182 - -0.6 123,182 - +0.3 123,463 - QEN71_RS00570 0.77 +1.2 123,463 - QEN71_RS00570 0.77 +2.4 123,463 - QEN71_RS00570 0.77 -1.0 123,464 + QEN71_RS00570 0.78 +0.5 123,464 + QEN71_RS00570 0.78 +1.4 123,464 + QEN71_RS00570 0.78 -0.3 123,464 + QEN71_RS00570 0.78 +0.1 123,464 + QEN71_RS00570 0.78 -0.1 123,464 + QEN71_RS00570 0.78 -0.2 123,464 + QEN71_RS00570 0.78 -0.6 123,464 + QEN71_RS00570 0.78 -0.3 123,464 + QEN71_RS00570 0.78 +0.4 123,464 + QEN71_RS00570 0.78 -0.9 123,464 + QEN71_RS00570 0.78 +0.7 123,464 + QEN71_RS00570 0.78 -0.6 123,465 - QEN71_RS00570 0.78 -0.9 123,465 - QEN71_RS00570 0.78 +0.7 123,465 - QEN71_RS00570 0.78 +1.1 123,465 - QEN71_RS00570 0.78 -1.1 123,465 - QEN71_RS00570 0.78 +0.5 123,465 - QEN71_RS00570 0.78 +0.2 123,465 - QEN71_RS00570 0.78 -0.3 123,465 - QEN71_RS00570 0.78 -0.2 123,605 + -0.3 123,605 + -0.6 123,606 - -0.2 123,638 + +0.9 123,638 + +0.9 123,638 + -0.5 123,638 + -1.4 123,638 + -0.9 123,638 + -1.6 123,638 + -0.8 123,638 + -1.6 123,638 + -1.3 123,638 + -0.9 123,638 + +0.4 123,638 + -0.0 123,638 + -0.0 123,638 + +1.0 123,638 + -1.2 123,638 + -0.6 123,639 - -0.3 123,639 - -1.3 123,639 - -0.3 123,639 - -0.9 123,639 - +2.0 123,639 - -1.0 123,639 - -0.2 123,639 - -1.1 123,639 - -0.6 123,639 - -0.9 123,639 - -1.3 123,639 - -0.4 123,639 - -0.3 123,786 + -0.6 123,786 + -1.4 123,786 + +1.3 123,786 + +0.4 123,786 + -0.7 123,786 + +1.5 123,787 - -0.3 123,968 + QEN71_RS00575 0.13 +1.6 123,968 + QEN71_RS00575 0.13 -0.1 123,968 + QEN71_RS00575 0.13 -0.3 123,968 + QEN71_RS00575 0.13 +0.7 123,968 + QEN71_RS00575 0.13 +0.3 123,968 + QEN71_RS00575 0.13 +0.1 123,969 - QEN71_RS00575 0.13 -0.1 123,969 - QEN71_RS00575 0.13 -0.7 123,982 + QEN71_RS00575 0.15 -1.8 123,982 + QEN71_RS00575 0.15 +0.7 123,982 + QEN71_RS00575 0.15 -0.6 123,982 + QEN71_RS00575 0.15 +0.6 123,982 + QEN71_RS00575 0.15 +0.3 123,982 + QEN71_RS00575 0.15 -1.6 123,982 + QEN71_RS00575 0.15 -0.6 123,982 + QEN71_RS00575 0.15 -0.7 123,982 + QEN71_RS00575 0.15 +0.1 123,982 + QEN71_RS00575 0.15 -0.3 123,982 + QEN71_RS00575 0.15 -0.6 123,982 + QEN71_RS00575 0.15 +0.2 123,982 + QEN71_RS00575 0.15 -0.8 123,982 + QEN71_RS00575 0.15 -0.5 123,982 + QEN71_RS00575 0.15 -0.9 123,982 + QEN71_RS00575 0.15 -0.1 123,982 + QEN71_RS00575 0.15 -0.4 123,982 + QEN71_RS00575 0.15 -0.2 123,983 - QEN71_RS00575 0.15 +0.5 123,983 - QEN71_RS00575 0.15 -1.3 123,983 - QEN71_RS00575 0.15 -0.4 123,983 - QEN71_RS00575 0.15 +0.7 123,983 - QEN71_RS00575 0.15 +0.0 123,983 - QEN71_RS00575 0.15 -0.5 123,983 - QEN71_RS00575 0.15 +0.4 123,983 - QEN71_RS00575 0.15 -0.2 123,983 - QEN71_RS00575 0.15 -0.4 123,983 - QEN71_RS00575 0.15 +0.0 123,983 - QEN71_RS00575 0.15 -1.2 123,983 - QEN71_RS00575 0.15 -1.2 123,983 - QEN71_RS00575 0.15 -0.3 123,983 - QEN71_RS00575 0.15 -0.6 123,983 - QEN71_RS00575 0.15 +0.2 123,983 - QEN71_RS00575 0.15 -0.9 123,983 - QEN71_RS00575 0.15 +0.1 123,983 - QEN71_RS00575 0.15 -0.4 123,983 - QEN71_RS00575 0.15 +0.2 123,983 - QEN71_RS00575 0.15 +0.3 123,986 - QEN71_RS00575 0.15 -0.3 124,039 + QEN71_RS00575 0.20 +0.3 124,039 + QEN71_RS00575 0.20 +0.5 124,039 + QEN71_RS00575 0.20 +0.3 124,039 + QEN71_RS00575 0.20 -0.4 124,039 + QEN71_RS00575 0.20 -0.1 124,040 - QEN71_RS00575 0.20 +0.1 124,045 + QEN71_RS00575 0.20 -2.2 124,046 - QEN71_RS00575 0.20 -0.2 124,046 - QEN71_RS00575 0.20 -0.4 124,496 - QEN71_RS00575 0.61 +0.4 124,513 + QEN71_RS00575 0.63 -1.1 124,513 + QEN71_RS00575 0.63 -0.2 124,513 + QEN71_RS00575 0.63 -0.1 124,513 + QEN71_RS00575 0.63 -0.7 124,513 + QEN71_RS00575 0.63 -0.1 124,513 + QEN71_RS00575 0.63 -0.7 124,514 - QEN71_RS00575 0.63 -0.4 124,514 - QEN71_RS00575 0.63 -1.0 124,514 - QEN71_RS00575 0.63 -0.3 124,514 - QEN71_RS00575 0.63 -0.6 124,514 - QEN71_RS00575 0.63 +0.4 124,514 - QEN71_RS00575 0.63 -0.5
Or see this region's nucleotide sequence