Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS18045

Experiment: planktonic; Day4; SGW;

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	planktonic; Day4; SGW;
3,968,856	-				+0.0
3,968,867	+				-0.8
3,968,867	+				-1.3
3,968,867	+				+0.1
3,968,868	-				-1.3
3,968,868	-				+0.3
3,968,935	+				-0.6
3,968,935	+				+0.5
3,968,935	+				-1.6
3,968,936	-				+0.3
3,969,012	+		LRK53_RS18035	0.16	-1.0
3,969,013	-		LRK53_RS18035	0.16	-0.3
3,969,026	-		LRK53_RS18035	0.19	-1.7
3,969,051	-		LRK53_RS18035	0.24	-0.0
3,969,051	-		LRK53_RS18035	0.24	+0.5
3,969,057	+		LRK53_RS18035	0.25	-1.3
3,969,057	+		LRK53_RS18035	0.25	-0.4
3,969,057	+		LRK53_RS18035	0.25	-1.8
3,969,057	+		LRK53_RS18035	0.25	-0.6
3,969,058	-		LRK53_RS18035	0.25	-1.6
3,969,058	-		LRK53_RS18035	0.25	-0.4
3,969,058	-		LRK53_RS18035	0.25	-0.2
3,969,058	-		LRK53_RS18035	0.25	-1.4
3,969,065	-		LRK53_RS18035	0.27	-1.0
3,969,082	+		LRK53_RS18035	0.30	-0.6
3,969,116	+		LRK53_RS18035	0.37	-0.9
3,969,133	+		LRK53_RS18035	0.41	-0.5
3,969,134	-		LRK53_RS18035	0.41	-0.4
3,969,134	-		LRK53_RS18035	0.41	+0.3
3,969,134	-		LRK53_RS18035	0.41	-2.7
3,969,134	-		LRK53_RS18035	0.41	-1.2
3,969,179	-		LRK53_RS18035	0.50	-0.8
3,969,190	+		LRK53_RS18035	0.52	-0.0
3,969,191	-		LRK53_RS18035	0.52	-1.0
3,969,213	-		LRK53_RS18035	0.57	-1.7
3,969,221	+		LRK53_RS18035	0.59	-1.4
3,969,222	-		LRK53_RS18035	0.59	-2.3
3,969,236	+		LRK53_RS18035	0.62	-0.4
3,969,236	+		LRK53_RS18035	0.62	-0.2
3,969,329	+		LRK53_RS18035	0.81	-1.8
3,969,354	+		LRK53_RS18035	0.86	-0.6
3,969,440	-				-2.4
3,969,461	+				-1.5
3,969,486	-		LRK53_RS18040	0.18	-1.1
3,969,606	+		LRK53_RS18040	0.56	-1.7
3,969,683	+		LRK53_RS18040	0.81	-0.8
3,969,683	+		LRK53_RS18040	0.81	+2.0
3,969,683	+		LRK53_RS18040	0.81	-3.1
3,969,683	+		LRK53_RS18040	0.81	+0.7
3,969,683	+		LRK53_RS18040	0.81	-0.9
3,969,683	+		LRK53_RS18040	0.81	-1.4
3,969,683	+		LRK53_RS18040	0.81	-3.1
3,969,684	-		LRK53_RS18040	0.81	-0.4
3,969,686	+		LRK53_RS18040	0.82	-1.7
3,969,686	+		LRK53_RS18040	0.82	-0.2
3,969,686	+		LRK53_RS18040	0.82	+0.5
3,969,686	+		LRK53_RS18040	0.82	-0.9
3,969,686	+		LRK53_RS18040	0.82	-0.6
3,969,687	-		LRK53_RS18040	0.82	-2.0
3,969,687	-		LRK53_RS18040	0.82	-1.6
3,969,687	-		LRK53_RS18040	0.82	+0.2
3,969,746	+				-1.6
3,969,746	+				-0.4
3,969,814	+				-1.5
3,969,815	-				+0.4
3,969,815	-				+0.6
3,969,815	-				-0.0
3,969,822	+				+0.5
3,969,822	+				-1.2
3,969,822	+				-1.8
3,969,822	+				-0.0
3,969,822	+				-2.5
3,969,822	+				-0.9
3,969,823	-				-0.4
3,969,823	-				-0.5
3,969,823	-				+3.3
3,969,823	-				-0.0
3,969,823	-				-1.3
3,969,823	-				-0.9
3,969,823	-				+0.6
3,969,852	+				-1.2
3,969,853	-				-1.0
3,969,853	-				-0.0
3,969,917	+		LRK53_RS18045	0.29	+0.3
3,969,917	+		LRK53_RS18045	0.29	-1.0
3,969,917	+		LRK53_RS18045	0.29	-0.0
3,969,917	+		LRK53_RS18045	0.29	-1.5
3,969,917	+		LRK53_RS18045	0.29	-0.2
3,969,918	-		LRK53_RS18045	0.30	-1.0
3,969,918	-		LRK53_RS18045	0.30	-0.8
3,969,946	+		LRK53_RS18045	0.41	+0.5
3,969,946	+		LRK53_RS18045	0.41	-0.8
3,969,947	-		LRK53_RS18045	0.42	-0.7
3,970,067	+				-0.0
3,970,087	-				-2.2
3,970,123	+				-0.6
3,970,123	+				+0.1
3,970,142	+				-2.6
3,970,142	+				-2.5
3,970,142	+				+0.7
3,970,142	+				-0.2
3,970,143	-				+0.1
3,970,143	-				-0.2
3,970,143	-				-0.3
3,970,153	+				+0.1
3,970,165	+				-1.4
3,970,165	+				+1.4
3,970,165	+				-1.3
3,970,165	+				-1.1
3,970,165	+				-0.7
3,970,165	+				-1.3
3,970,165	+				+1.1
3,970,165	+				+0.3
3,970,165	+				-1.6
3,970,166	-				-1.9
3,970,166	-				+1.2
3,970,166	-				-0.6
3,970,166	-				-1.4
3,970,166	-				-0.2
3,970,166	-				+0.3
3,970,166	-				-0.5
3,970,184	+				-2.5
3,970,184	+				-0.5
3,970,184	+				-0.9
3,970,184	+				+0.1
3,970,184	+				-2.2
3,970,184	+				-1.6
3,970,185	-				-2.6
3,970,185	-				-0.1
3,970,185	-				+0.6
3,970,185	-				+0.5
3,970,185	-				-0.2
3,970,185	-				-0.4
3,970,275	+		LRK53_RS18050	0.15	-0.9
3,970,275	+		LRK53_RS18050	0.15	-0.2
3,970,275	+		LRK53_RS18050	0.15	+0.1
3,970,275	+		LRK53_RS18050	0.15	-2.0
3,970,275	+		LRK53_RS18050	0.15	-0.7
3,970,275	+		LRK53_RS18050	0.15	-0.2
3,970,275	+		LRK53_RS18050	0.15	-2.0
3,970,275	+		LRK53_RS18050	0.15	-0.7
3,970,275	+		LRK53_RS18050	0.15	-2.1
3,970,275	+		LRK53_RS18050	0.15	+1.0
3,970,275	+		LRK53_RS18050	0.15	+0.2
3,970,276	-		LRK53_RS18050	0.15	+0.4
3,970,276	-		LRK53_RS18050	0.15	+0.5
3,970,276	-		LRK53_RS18050	0.15	-0.6
3,970,276	-		LRK53_RS18050	0.15	-0.6
3,970,629	+		LRK53_RS18050	0.62	-1.1
3,970,629	+		LRK53_RS18050	0.62	+0.4
3,970,629	+		LRK53_RS18050	0.62	+0.1
3,970,629	+		LRK53_RS18050	0.62	-0.0
3,970,630	-		LRK53_RS18050	0.63	-0.3
3,970,831	+		LRK53_RS18050	0.89	-1.2
3,970,831	+		LRK53_RS18050	0.89	-0.2
3,970,831	+		LRK53_RS18050	0.89	-1.3
3,970,831	+		LRK53_RS18050	0.89	-1.7
3,970,831	+		LRK53_RS18050	0.89	-0.3
3,970,832	-		LRK53_RS18050	0.89	-0.6
3,970,832	-		LRK53_RS18050	0.89	-1.3
3,970,832	-		LRK53_RS18050	0.89	+0.7
3,970,951	+				-0.4
3,970,957	+				-1.2
3,970,957	+				+0.5
3,970,957	+				-0.0
3,970,957	+				-0.5
3,970,957	+				-0.7
3,970,957	+				-1.2
3,970,957	+				-0.6
3,970,958	-				-0.3
3,970,958	-				-1.6
3,970,958	-				-0.0
3,970,977	+				-1.0
3,970,978	-				+0.4
3,971,069	+		LRK53_RS18055	0.16	-1.0
3,971,069	+		LRK53_RS18055	0.16	-0.9