Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS17455

Experiment: planktonic; Day4; SGW;

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	planktonic; Day4; SGW;
3,830,465	+		LRK53_RS17450	0.38	-0.4
3,830,902	-		LRK53_RS17450	0.70	-2.5
3,831,125	-		LRK53_RS17450	0.86	+0.3
3,831,207	+				-1.3
3,831,207	+				-0.9
3,831,207	+				-0.2
3,831,207	+				-1.8
3,831,208	-				-2.2
3,831,208	-				-2.7
3,831,208	-				+0.3
3,831,208	-				-1.9
3,831,208	-				+2.1
3,831,208	-				-2.6
3,831,208	-				-0.5
3,831,208	-				-0.2
3,831,208	-				-2.2
3,831,500	+				+0.1
3,831,500	+				-0.4
3,831,501	-				-0.7
3,831,501	-				-1.8
3,831,501	-				-2.9
3,831,501	-				-0.2
3,831,518	+		LRK53_RS17455	0.11	+0.1
3,831,519	-		LRK53_RS17455	0.11	+0.5
3,831,519	-		LRK53_RS17455	0.11	-0.3
3,831,524	+		LRK53_RS17455	0.11	-0.9
3,831,524	+		LRK53_RS17455	0.11	-1.9
3,831,524	+		LRK53_RS17455	0.11	-2.1
3,831,524	+		LRK53_RS17455	0.11	-0.2
3,831,524	+		LRK53_RS17455	0.11	-0.2
3,831,524	+		LRK53_RS17455	0.11	+0.5
3,831,524	+		LRK53_RS17455	0.11	-0.7
3,831,524	+		LRK53_RS17455	0.11	+0.1
3,831,524	+		LRK53_RS17455	0.11	-1.0
3,831,524	+		LRK53_RS17455	0.11	-0.7
3,831,525	-		LRK53_RS17455	0.11	-1.7
3,831,525	-		LRK53_RS17455	0.11	-1.5
3,831,525	-		LRK53_RS17455	0.11	-1.3
3,831,525	-		LRK53_RS17455	0.11	-1.2
3,831,525	-		LRK53_RS17455	0.11	-0.5
3,831,525	-		LRK53_RS17455	0.11	-1.6
3,831,525	-		LRK53_RS17455	0.11	-1.7
3,831,525	-		LRK53_RS17455	0.11	-1.7
3,831,525	-		LRK53_RS17455	0.11	-2.3
3,831,525	-		LRK53_RS17455	0.11	-1.9
3,831,899	+		LRK53_RS17455	0.38	+0.6
3,831,899	+		LRK53_RS17455	0.38	+1.7
3,831,899	+		LRK53_RS17455	0.38	-2.3
3,831,899	+		LRK53_RS17455	0.38	-0.9
3,831,899	+		LRK53_RS17455	0.38	-1.3
3,831,899	+		LRK53_RS17455	0.38	+0.3
3,831,900	-		LRK53_RS17455	0.38	-0.9
3,831,900	-		LRK53_RS17455	0.38	-2.3
3,831,900	-		LRK53_RS17455	0.38	-1.8
3,831,900	-		LRK53_RS17455	0.38	-0.8
3,831,900	-		LRK53_RS17455	0.38	+0.1
3,831,900	-		LRK53_RS17455	0.38	+0.3
3,831,900	-		LRK53_RS17455	0.38	-1.3
3,831,900	-		LRK53_RS17455	0.38	+0.1
3,831,900	-		LRK53_RS17455	0.38	-2.4
3,832,055	+		LRK53_RS17455	0.49	-0.8
3,832,055	+		LRK53_RS17455	0.49	-0.1
3,832,055	+		LRK53_RS17455	0.49	-0.6
3,832,055	+		LRK53_RS17455	0.49	+0.1
3,832,055	+		LRK53_RS17455	0.49	+0.5
3,832,055	+		LRK53_RS17455	0.49	-0.7
3,832,056	-		LRK53_RS17455	0.50	-1.2
3,832,056	-		LRK53_RS17455	0.50	-2.2
3,832,056	-		LRK53_RS17455	0.50	-0.7
3,832,056	-		LRK53_RS17455	0.50	-1.9
3,832,056	-		LRK53_RS17455	0.50	-0.5
3,832,325	+		LRK53_RS17455	0.69	-0.7
3,832,325	+		LRK53_RS17455	0.69	-2.4
3,832,325	+		LRK53_RS17455	0.69	+0.1
3,832,325	+		LRK53_RS17455	0.69	-0.7
3,832,325	+		LRK53_RS17455	0.69	-1.8
3,832,325	+		LRK53_RS17455	0.69	-1.3
3,832,325	+		LRK53_RS17455	0.69	-2.2
3,832,325	+		LRK53_RS17455	0.69	-0.6
3,832,325	+		LRK53_RS17455	0.69	+0.5
3,832,325	+		LRK53_RS17455	0.69	-2.0
3,832,326	-		LRK53_RS17455	0.69	-2.4
3,832,326	-		LRK53_RS17455	0.69	-0.5
3,832,326	-		LRK53_RS17455	0.69	-1.9
3,832,326	-		LRK53_RS17455	0.69	-0.1
3,832,326	-		LRK53_RS17455	0.69	-1.3
3,832,326	-		LRK53_RS17455	0.69	-3.5
3,832,326	-		LRK53_RS17455	0.69	-0.5
3,832,326	-		LRK53_RS17455	0.69	-1.4
3,832,326	-		LRK53_RS17455	0.69	+0.1
3,832,326	-		LRK53_RS17455	0.69	-0.7
3,832,326	-		LRK53_RS17455	0.69	-0.0
3,832,454	+		LRK53_RS17455	0.78	+1.6
3,832,454	+		LRK53_RS17455	0.78	+0.3
3,832,454	+		LRK53_RS17455	0.78	+1.5
3,832,454	+		LRK53_RS17455	0.78	-1.1
3,832,455	-		LRK53_RS17455	0.78	-1.2
3,832,455	-		LRK53_RS17455	0.78	-1.6
3,832,706	+				-0.9
3,832,706	+				-0.7
3,832,706	+				-1.3
3,832,706	+				+0.5
3,832,707	-				+1.3
3,832,707	-				+0.1
3,832,707	-				-0.2
3,832,707	-				+0.5
3,832,707	-				-0.4
3,832,757	+				-0.2
3,832,758	-				-0.3
3,832,758	-				-1.1
3,832,758	-				+0.3
3,832,758	-				-1.1
3,832,876	+		LRK53_RS17460	0.14	-0.0
3,832,876	+		LRK53_RS17460	0.14	-1.3
3,832,877	-		LRK53_RS17460	0.14	+2.3
3,832,877	-		LRK53_RS17460	0.14	+0.3
3,833,183	-		LRK53_RS17460	0.53	-1.2
3,833,183	-		LRK53_RS17460	0.53	-1.8
3,833,317	+		LRK53_RS17460	0.70	+1.5
3,833,318	-		LRK53_RS17460	0.70	-0.4
3,833,494	+				+0.3
3,833,494	+				-1.2
3,833,495	-				-0.3
3,833,495	-				-0.6
3,833,495	-				-3.1
3,833,559	+				-0.5
3,833,560	-				-2.9
3,833,560	-				-0.3
3,833,616	+		LRK53_RS17465	0.13	+2.3
3,833,616	+		LRK53_RS17465	0.13	-1.0
3,833,616	+		LRK53_RS17465	0.13	+1.1
3,833,616	+		LRK53_RS17465	0.13	-0.3
3,833,616	+		LRK53_RS17465	0.13	-0.8
3,833,616	+		LRK53_RS17465	0.13	+0.5
3,833,616	+		LRK53_RS17465	0.13	-1.7
3,833,617	-		LRK53_RS17465	0.14	-0.2
3,833,617	-		LRK53_RS17465	0.14	+0.5
3,833,617	-		LRK53_RS17465	0.14	-1.0
3,833,731	-		LRK53_RS17465	0.40	-0.0
3,833,731	-		LRK53_RS17465	0.40	+0.1
3,833,731	-		LRK53_RS17465	0.40	+0.1
3,833,731	-		LRK53_RS17465	0.40	-1.0
3,833,731	-		LRK53_RS17465	0.40	-1.1
3,833,739	+		LRK53_RS17465	0.42	-0.0
3,833,739	+		LRK53_RS17465	0.42	-1.2
3,833,739	+		LRK53_RS17465	0.42	-1.3
3,833,739	+		LRK53_RS17465	0.42	+0.9
3,833,739	+		LRK53_RS17465	0.42	-0.6
3,833,739	+		LRK53_RS17465	0.42	-1.0
3,833,739	+		LRK53_RS17465	0.42	-0.3
3,833,740	-		LRK53_RS17465	0.42	-0.4
3,833,740	-		LRK53_RS17465	0.42	+1.0
3,833,740	-		LRK53_RS17465	0.42	+0.8
3,833,740	-		LRK53_RS17465	0.42	-2.2
3,833,740	-		LRK53_RS17465	0.42	-1.2