Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS16655

Experiment: planktonic; Day4; SGW;

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	planktonic; Day4; SGW;
3,662,708	+		LRK53_RS16645	0.71	-0.1
3,662,708	+		LRK53_RS16645	0.71	-0.9
3,662,708	+		LRK53_RS16645	0.71	-0.6
3,662,708	+		LRK53_RS16645	0.71	-1.7
3,662,708	+		LRK53_RS16645	0.71	-2.1
3,662,708	+		LRK53_RS16645	0.71	+0.1
3,662,708	+		LRK53_RS16645	0.71	+0.4
3,662,708	+		LRK53_RS16645	0.71	-1.2
3,662,708	+		LRK53_RS16645	0.71	-2.2
3,662,709	-		LRK53_RS16645	0.71	+0.8
3,662,709	-		LRK53_RS16645	0.71	-3.2
3,662,709	-		LRK53_RS16645	0.71	-0.3
3,662,709	-		LRK53_RS16645	0.71	+0.3
3,662,709	-		LRK53_RS16645	0.71	+0.2
3,662,709	-		LRK53_RS16645	0.71	-1.8
3,662,709	-		LRK53_RS16645	0.71	-2.2
3,662,709	-		LRK53_RS16645	0.71	-0.6
3,662,709	-		LRK53_RS16645	0.71	-0.1
3,662,709	-		LRK53_RS16645	0.71	-0.3
3,662,709	-		LRK53_RS16645	0.71	-0.8
3,662,811	-				-1.0
3,662,811	-				+0.7
3,662,883	+				-1.3
3,662,883	+				-1.9
3,662,883	+				-0.7
3,662,883	+				+0.5
3,662,883	+				-0.2
3,662,883	+				+0.7
3,662,883	+				-1.5
3,662,883	+				-0.1
3,662,884	-				+0.2
3,662,884	-				+0.1
3,662,884	-				-0.8
3,662,884	-				-0.6
3,662,884	-				-0.9
3,662,884	-				-1.4
3,662,884	-				+0.2
3,662,884	-				+0.9
3,662,884	-				-1.2
3,662,884	-				-0.4
3,662,888	+				-2.0
3,662,888	+				-2.2
3,662,888	+				+0.5
3,662,888	+				-1.1
3,662,888	+				+0.4
3,662,888	+				+0.1
3,662,888	+				-0.2
3,662,888	+				-1.8
3,662,888	+				-1.7
3,662,888	+				+0.4
3,662,888	+				+0.7
3,662,888	+				+0.1
3,662,888	+				+1.2
3,662,888	+				+0.6
3,662,888	+				-0.2
3,662,888	+				+0.9
3,662,888	+				-2.3
3,662,888	+				-1.6
3,662,888	+				+0.2
3,662,888	+				-2.9
3,662,888	+				-0.7
3,662,889	-				-0.6
3,662,889	-				+0.1
3,662,889	-				+0.1
3,662,889	-				-1.3
3,662,889	-				-0.8
3,662,889	-				+2.2
3,662,889	-				-1.7
3,662,889	-				+0.1
3,662,889	-				-2.1
3,662,889	-				-1.0
3,662,889	-				-0.8
3,662,889	-				-2.5
3,662,889	-				-0.5
3,662,889	-				-0.6
3,662,889	-				-1.5
3,662,889	-				-1.6
3,662,889	-				-0.3
3,662,889	-				-1.4
3,662,889	-				-2.0
3,662,889	-				+0.3
3,662,889	-				-0.5
3,662,889	-				-1.9
3,662,889	-				+0.2
3,662,889	-				+0.4
3,662,889	-				-0.8
3,662,889	-				-0.6
3,663,074	+		LRK53_RS16650	0.33	-0.5
3,663,074	+		LRK53_RS16650	0.33	-0.0
3,663,075	-		LRK53_RS16650	0.33	+0.2
3,663,075	-		LRK53_RS16650	0.33	-1.7
3,663,278	-		LRK53_RS16650	0.72	+0.1
3,663,418	+				-1.8
3,663,418	+				-2.1
3,663,418	+				-0.6
3,663,419	-				-0.1
3,663,419	-				-2.2
3,663,419	-				+0.1
3,663,419	-				-1.0
3,663,515	+				-0.3
3,663,515	+				-2.0
3,663,516	-				-1.8
3,663,622	+				-1.8
3,663,622	+				-0.8
3,663,622	+				-0.2
3,663,622	+				+0.7
3,663,622	+				-2.2
3,663,622	+				+1.1
3,663,622	+				-0.5
3,663,623	-				-0.2
3,663,623	-				-1.3
3,663,623	-				-0.7
3,663,623	-				-0.5
3,663,624	+				-0.5
3,663,625	-				-0.3
3,663,625	-				-0.9
3,663,625	-				-1.7
3,663,733	+				-1.3
3,663,733	+				+0.1
3,663,734	-				-1.3
3,663,734	-				-1.3
3,663,734	-				+1.5
3,663,734	-				-0.1
3,663,734	-				-0.1
3,663,734	-				-1.2
3,663,855	+		LRK53_RS16655	0.15	+0.1
3,663,855	+		LRK53_RS16655	0.15	+0.2
3,663,855	+		LRK53_RS16655	0.15	+0.1
3,663,855	+		LRK53_RS16655	0.15	+1.2
3,663,855	+		LRK53_RS16655	0.15	-1.1
3,663,855	+		LRK53_RS16655	0.15	-1.2
3,663,855	+		LRK53_RS16655	0.15	+1.7
3,663,855	+		LRK53_RS16655	0.15	+1.1
3,663,855	+		LRK53_RS16655	0.15	-0.4
3,663,855	+		LRK53_RS16655	0.15	-0.7
3,663,855	+		LRK53_RS16655	0.15	-0.7
3,663,855	+		LRK53_RS16655	0.15	-2.9
3,663,856	-		LRK53_RS16655	0.15	-0.1
3,663,856	-		LRK53_RS16655	0.15	-0.1
3,663,856	-		LRK53_RS16655	0.15	+0.7
3,663,856	-		LRK53_RS16655	0.15	-2.8
3,663,856	-		LRK53_RS16655	0.15	-1.8
3,663,856	-		LRK53_RS16655	0.15	-1.4
3,663,856	-		LRK53_RS16655	0.15	-0.6
3,663,856	-		LRK53_RS16655	0.15	+0.7
3,663,856	-		LRK53_RS16655	0.15	+0.0
3,663,856	-		LRK53_RS16655	0.15	-0.5
3,663,856	-		LRK53_RS16655	0.15	-0.6
3,664,005	+		LRK53_RS16655	0.24	-0.8
3,664,005	+		LRK53_RS16655	0.24	+0.4
3,664,005	+		LRK53_RS16655	0.24	-1.5
3,664,006	-		LRK53_RS16655	0.24	-1.6
3,664,006	-		LRK53_RS16655	0.24	-1.6
3,664,143	+		LRK53_RS16655	0.33	-1.3
3,664,143	+		LRK53_RS16655	0.33	-0.9
3,664,143	+		LRK53_RS16655	0.33	+0.1
3,664,143	+		LRK53_RS16655	0.33	+0.2
3,664,143	+		LRK53_RS16655	0.33	+0.3
3,664,143	+		LRK53_RS16655	0.33	+0.7
3,664,144	-		LRK53_RS16655	0.33	-0.9
3,664,144	-		LRK53_RS16655	0.33	+1.1
3,664,144	-		LRK53_RS16655	0.33	-1.6
3,664,144	-		LRK53_RS16655	0.33	-0.1
3,664,144	-		LRK53_RS16655	0.33	-1.0
3,664,144	-		LRK53_RS16655	0.33	+0.7
3,664,144	-		LRK53_RS16655	0.33	-0.8
3,664,173	+		LRK53_RS16655	0.34	+0.2
3,664,173	+		LRK53_RS16655	0.34	+0.2
3,664,174	-		LRK53_RS16655	0.35	-2.2
3,664,174	-		LRK53_RS16655	0.35	-1.3
3,664,174	-		LRK53_RS16655	0.35	-0.1
3,664,330	+		LRK53_RS16655	0.44	+0.9
3,664,331	-		LRK53_RS16655	0.44	-1.4
3,664,337	+		LRK53_RS16655	0.44	+0.2
3,664,381	+		LRK53_RS16655	0.47	-1.2
3,664,381	+		LRK53_RS16655	0.47	+0.1
3,664,382	-		LRK53_RS16655	0.47	-1.0
3,664,682	-		LRK53_RS16655	0.65	-2.9
3,664,702	+		LRK53_RS16655	0.66	-3.2
3,664,702	+		LRK53_RS16655	0.66	-0.2
3,664,702	+		LRK53_RS16655	0.66	-1.2
3,664,702	+		LRK53_RS16655	0.66	+0.9
3,664,703	-		LRK53_RS16655	0.67	-0.0
3,664,703	-		LRK53_RS16655	0.67	-0.5
3,664,703	-		LRK53_RS16655	0.67	+1.2
3,664,703	-		LRK53_RS16655	0.67	-2.6
3,664,703	-		LRK53_RS16655	0.67	-0.9
3,664,703	-		LRK53_RS16655	0.67	+0.2
3,664,703	-		LRK53_RS16655	0.67	-1.3
3,664,703	-		LRK53_RS16655	0.67	-0.1
3,664,703	-		LRK53_RS16655	0.67	-1.6
3,664,703	-		LRK53_RS16655	0.67	-1.6
3,664,703	-		LRK53_RS16655	0.67	-0.6
3,664,703	-		LRK53_RS16655	0.67	-1.2
3,664,703	-		LRK53_RS16655	0.67	+1.1
3,664,703	-		LRK53_RS16655	0.67	-0.8
3,664,703	-		LRK53_RS16655	0.67	-1.0
3,664,703	-		LRK53_RS16655	0.67	+0.1
3,664,703	-		LRK53_RS16655	0.67	-0.2
3,664,703	-		LRK53_RS16655	0.67	-1.1
3,664,703	-		LRK53_RS16655	0.67	+0.7
3,664,706	+		LRK53_RS16655	0.67	-0.6
3,664,707	-		LRK53_RS16655	0.67	-0.4
3,664,707	-		LRK53_RS16655	0.67	+0.7
3,664,729	+		LRK53_RS16655	0.68	-0.9
3,664,729	+		LRK53_RS16655	0.68	-0.2
3,664,729	+		LRK53_RS16655	0.68	-2.2
3,664,729	+		LRK53_RS16655	0.68	-0.5
3,664,730	-		LRK53_RS16655	0.68	-0.3
3,664,730	-		LRK53_RS16655	0.68	-0.3
3,664,730	-		LRK53_RS16655	0.68	-0.3
3,664,730	-		LRK53_RS16655	0.68	-1.5
3,664,813	+		LRK53_RS16655	0.73	-1.3
3,664,813	+		LRK53_RS16655	0.73	+0.2
3,664,813	+		LRK53_RS16655	0.73	+1.4
3,664,813	+		LRK53_RS16655	0.73	-0.3
3,664,813	+		LRK53_RS16655	0.73	-2.0
3,664,813	+		LRK53_RS16655	0.73	-0.1
3,664,814	-		LRK53_RS16655	0.73	-0.6
3,664,814	-		LRK53_RS16655	0.73	-2.1
3,664,814	-		LRK53_RS16655	0.73	-1.7
3,664,814	-		LRK53_RS16655	0.73	-0.5
3,664,814	-		LRK53_RS16655	0.73	-0.8
3,664,816	+		LRK53_RS16655	0.73	+0.4
3,664,816	+		LRK53_RS16655	0.73	-0.7
3,664,816	+		LRK53_RS16655	0.73	-0.8
3,664,816	+		LRK53_RS16655	0.73	+1.0
3,664,816	+		LRK53_RS16655	0.73	-0.7
3,664,817	-		LRK53_RS16655	0.73	+0.4
3,664,817	-		LRK53_RS16655	0.73	+0.3
3,664,817	-		LRK53_RS16655	0.73	-1.3
3,664,817	-		LRK53_RS16655	0.73	-1.4
3,664,817	-		LRK53_RS16655	0.73	-2.9
3,664,817	-		LRK53_RS16655	0.73	-0.7
3,664,817	-		LRK53_RS16655	0.73	+2.1
3,664,817	-		LRK53_RS16655	0.73	+1.2
3,664,831	+		LRK53_RS16655	0.74	+0.1
3,664,831	+		LRK53_RS16655	0.74	-1.0
3,664,831	+		LRK53_RS16655	0.74	-1.4
3,664,831	+		LRK53_RS16655	0.74	-1.8
3,664,831	+		LRK53_RS16655	0.74	+1.2
3,664,831	+		LRK53_RS16655	0.74	-0.8
3,664,831	+		LRK53_RS16655	0.74	-1.1
3,664,831	+		LRK53_RS16655	0.74	+1.7
3,664,831	+		LRK53_RS16655	0.74	-2.9
3,664,832	-		LRK53_RS16655	0.74	+0.2
3,664,832	-		LRK53_RS16655	0.74	-0.2
3,664,832	-		LRK53_RS16655	0.74	+1.8
3,664,832	-		LRK53_RS16655	0.74	-1.6
3,664,832	-		LRK53_RS16655	0.74	+0.1
3,664,832	-		LRK53_RS16655	0.74	-0.2
3,664,832	-		LRK53_RS16655	0.74	-2.5
3,664,832	-		LRK53_RS16655	0.74	-2.4
3,664,832	-		LRK53_RS16655	0.74	-0.8
3,664,832	-		LRK53_RS16655	0.74	-1.2
3,664,832	-		LRK53_RS16655	0.74	-0.8
3,664,852	+		LRK53_RS16655	0.76	-1.3
3,664,852	+		LRK53_RS16655	0.76	-1.4
3,664,853	-		LRK53_RS16655	0.76	-1.2
3,664,853	-		LRK53_RS16655	0.76	-3.4
3,664,853	-		LRK53_RS16655	0.76	-2.2
3,665,084	+		LRK53_RS16655	0.90	-2.6
3,665,085	-		LRK53_RS16655	0.90	-0.5
3,665,085	-		LRK53_RS16655	0.90	-0.8
3,665,334	+				+0.1
3,665,334	+				-2.1
3,665,335	-				-1.5
3,665,335	-				-0.7
3,665,447	-				-0.9
3,665,895	+		LRK53_RS16660	0.32	-1.0
3,665,895	+		LRK53_RS16660	0.32	-0.5
3,665,895	+		LRK53_RS16660	0.32	+0.4
3,665,895	+		LRK53_RS16660	0.32	-1.2
3,665,895	+		LRK53_RS16660	0.32	-1.0
3,665,895	+		LRK53_RS16660	0.32	+0.9
3,665,896	-		LRK53_RS16660	0.32	-1.8
3,665,896	-		LRK53_RS16660	0.32	-1.3
3,665,896	-		LRK53_RS16660	0.32	-2.3
3,665,896	-		LRK53_RS16660	0.32	+1.1
3,665,896	-		LRK53_RS16660	0.32	-0.5
3,665,916	+		LRK53_RS16660	0.33	+0.2
3,665,917	-		LRK53_RS16660	0.33	-1.2
3,665,952	+		LRK53_RS16660	0.35	-0.8
3,665,952	+		LRK53_RS16660	0.35	-0.9
3,665,952	+		LRK53_RS16660	0.35	+2.1
3,665,952	+		LRK53_RS16660	0.35	+0.7
3,665,953	-		LRK53_RS16660	0.35	+0.2
3,665,953	-		LRK53_RS16660	0.35	-0.8
3,665,953	-		LRK53_RS16660	0.35	-0.0
3,665,953	-		LRK53_RS16660	0.35	-1.4
3,665,953	-		LRK53_RS16660	0.35	+0.4
3,665,953	-		LRK53_RS16660	0.35	-0.9
3,665,953	-		LRK53_RS16660	0.35	-2.7
3,665,953	-		LRK53_RS16660	0.35	-1.4
3,666,003	+		LRK53_RS16660	0.38	+0.1
3,666,004	-		LRK53_RS16660	0.38	-1.1
3,666,170	+		LRK53_RS16660	0.47	+0.1