Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS16360

Experiment: planktonic; Day4; SGW;

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	planktonic; Day4; SGW;
3,600,028	+				+1.5
3,600,028	+				+0.3
3,600,028	+				-0.8
3,600,029	-				+0.5
3,600,029	-				-1.7
3,600,029	-				+1.8
3,600,029	-				-0.1
3,600,124	-				-1.6
3,600,124	-				+0.8
3,600,126	+				-0.9
3,600,126	+				-0.6
3,600,126	+				-0.1
3,600,127	-				-1.3
3,600,127	-				-1.3
3,600,127	-				+0.9
3,600,127	-				-1.3
3,600,240	+				-0.5
3,600,241	-				-2.7
3,600,241	-				+2.2
3,600,241	-				-0.3
3,600,241	-				-0.5
3,600,393	+				+0.4
3,600,529	+				-0.5
3,600,529	+				+0.1
3,600,715	+		LRK53_RS16355	0.77	-1.3
3,600,749	-				-0.6
3,600,749	-				+0.9
3,600,762	+				+0.1
3,600,763	-				-1.8
3,600,763	-				-0.3
3,600,802	+				-0.1
3,600,850	+				-1.1
3,600,850	+				+0.4
3,600,851	-				-1.2
3,600,851	-				+0.2
3,601,042	+		LRK53_RS16360	0.14	+1.2
3,601,042	+		LRK53_RS16360	0.14	-1.4
3,601,042	+		LRK53_RS16360	0.14	-2.1
3,601,043	-		LRK53_RS16360	0.14	-1.5
3,601,043	-		LRK53_RS16360	0.14	-0.8
3,601,043	-		LRK53_RS16360	0.14	+1.7
3,601,043	-		LRK53_RS16360	0.14	-2.8
3,601,043	-		LRK53_RS16360	0.14	-0.9
3,601,063	+		LRK53_RS16360	0.19	-1.4
3,601,063	+		LRK53_RS16360	0.19	-1.0
3,601,063	+		LRK53_RS16360	0.19	-1.9
3,601,064	-		LRK53_RS16360	0.19	-1.7
3,601,064	-		LRK53_RS16360	0.19	-0.8
3,601,064	-		LRK53_RS16360	0.19	-0.1
3,601,064	-		LRK53_RS16360	0.19	-0.8
3,601,064	-		LRK53_RS16360	0.19	+0.2
3,601,104	+		LRK53_RS16360	0.28	+0.5
3,601,104	+		LRK53_RS16360	0.28	+0.9
3,601,105	-		LRK53_RS16360	0.28	-0.8
3,601,117	+		LRK53_RS16360	0.31	-0.9
3,601,117	+		LRK53_RS16360	0.31	-0.8
3,601,118	-		LRK53_RS16360	0.31	-1.5
3,601,118	-		LRK53_RS16360	0.31	+0.2
3,601,118	-		LRK53_RS16360	0.31	-1.7
3,601,121	+		LRK53_RS16360	0.32	-0.6
3,601,121	+		LRK53_RS16360	0.32	-0.8
3,601,121	+		LRK53_RS16360	0.32	-1.8
3,601,121	+		LRK53_RS16360	0.32	+1.3
3,601,121	+		LRK53_RS16360	0.32	+0.2
3,601,122	-		LRK53_RS16360	0.32	-2.0
3,601,122	-		LRK53_RS16360	0.32	-0.9
3,601,122	-		LRK53_RS16360	0.32	+0.1
3,601,122	-		LRK53_RS16360	0.32	-1.8
3,601,122	-		LRK53_RS16360	0.32	-0.1
3,601,122	-		LRK53_RS16360	0.32	-0.1
3,601,156	+		LRK53_RS16360	0.40	-1.3
3,601,156	+		LRK53_RS16360	0.40	-0.2
3,601,157	-		LRK53_RS16360	0.40	+0.7
3,601,157	-		LRK53_RS16360	0.40	+1.7
3,601,157	-		LRK53_RS16360	0.40	-0.0
3,601,157	-		LRK53_RS16360	0.40	-0.6
3,601,157	-		LRK53_RS16360	0.40	-0.2
3,601,157	-		LRK53_RS16360	0.40	-1.2
3,601,157	-		LRK53_RS16360	0.40	-1.1
3,601,157	-		LRK53_RS16360	0.40	+0.7
3,601,218	+		LRK53_RS16360	0.54	+0.2
3,601,219	-		LRK53_RS16360	0.54	-0.5
3,601,219	-		LRK53_RS16360	0.54	-0.9
3,601,219	-		LRK53_RS16360	0.54	+1.4
3,601,219	-		LRK53_RS16360	0.54	-0.7
3,601,219	-		LRK53_RS16360	0.54	-0.4
3,601,219	-		LRK53_RS16360	0.54	-1.3
3,601,219	-		LRK53_RS16360	0.54	+0.2
3,601,219	-		LRK53_RS16360	0.54	-1.0
3,601,219	-		LRK53_RS16360	0.54	-1.2
3,601,257	+		LRK53_RS16360	0.63	-1.1
3,601,257	+		LRK53_RS16360	0.63	+0.3
3,601,257	+		LRK53_RS16360	0.63	+0.3
3,601,257	+		LRK53_RS16360	0.63	+0.3
3,601,258	-		LRK53_RS16360	0.63	+0.2
3,601,258	-		LRK53_RS16360	0.63	-1.0
3,601,461	+				-1.3
3,601,478	+				-1.4
3,601,478	+				-0.8
3,601,478	+				-1.0
3,601,479	-				-1.2
3,601,479	-				+1.2
3,601,486	+				-1.3
3,601,487	-				+0.3
3,601,600	+				-0.5
3,601,600	+				+0.2
3,601,600	+				+0.1
3,601,600	+				-0.1
3,601,601	-				-1.0
3,601,601	-				-0.2
3,601,601	-				+0.2
3,601,627	+		LRK53_RS16365	0.11	-3.3
3,601,628	-		LRK53_RS16365	0.11	+0.2
3,601,628	-		LRK53_RS16365	0.11	+0.2
3,601,783	+		LRK53_RS16365	0.19	+1.5
3,601,783	+		LRK53_RS16365	0.19	+0.9
3,601,783	+		LRK53_RS16365	0.19	-0.1
3,601,783	+		LRK53_RS16365	0.19	-0.3
3,601,811	-		LRK53_RS16365	0.21	+0.1
3,601,811	-		LRK53_RS16365	0.21	-1.2
3,601,874	+		LRK53_RS16365	0.24	-1.5
3,601,875	-		LRK53_RS16365	0.24	+1.8
3,601,875	-		LRK53_RS16365	0.24	-1.0
3,601,875	-		LRK53_RS16365	0.24	-0.3
3,601,888	+		LRK53_RS16365	0.25	+0.8
3,601,888	+		LRK53_RS16365	0.25	-2.2
3,601,888	+		LRK53_RS16365	0.25	+0.1
3,601,889	-		LRK53_RS16365	0.25	-0.2
3,601,889	-		LRK53_RS16365	0.25	+0.5
3,602,150	-		LRK53_RS16365	0.39	+0.7
3,602,314	+		LRK53_RS16365	0.48	+1.7
3,602,314	+		LRK53_RS16365	0.48	-1.6
3,602,315	-		LRK53_RS16365	0.48	+0.5
3,602,315	-		LRK53_RS16365	0.48	-0.3
3,602,315	-		LRK53_RS16365	0.48	-0.7
3,602,315	-		LRK53_RS16365	0.48	-0.1
3,602,315	-		LRK53_RS16365	0.48	-0.7
3,602,416	+		LRK53_RS16365	0.53	-0.3
3,602,417	-		LRK53_RS16365	0.53	+0.9