Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS16110

Experiment: planktonic; Day4; SGW;

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	planktonic; Day4; SGW;
3,540,487	+				+0.6
3,540,487	+				-1.3
3,540,488	-				-0.8
3,540,488	-				-0.9
3,540,488	-				+0.3
3,540,488	-				-0.8
3,540,488	-				-0.2
3,540,488	-				+0.1
3,540,488	-				+0.2
3,540,773	+				-2.2
3,540,773	+				-1.7
3,540,773	+				-0.9
3,540,773	+				+0.7
3,540,773	+				-1.7
3,540,773	+				-0.9
3,540,773	+				+0.1
3,540,773	+				-0.7
3,540,773	+				-1.5
3,540,773	+				+0.4
3,540,774	-				-1.4
3,540,774	-				+1.2
3,540,774	-				-1.6
3,540,774	-				+1.2
3,540,774	-				+0.1
3,540,774	-				-1.4
3,540,774	-				-1.0
3,540,774	-				-0.2
3,540,774	-				+0.3
3,540,774	-				-0.6
3,540,774	-				+1.2
3,540,774	-				-0.6
3,540,774	-				-0.7
3,540,774	-				-0.7
3,540,889	+				+0.2
3,540,889	+				-2.9
3,540,889	+				-0.6
3,540,890	-				+0.1
3,541,044	+				+0.6
3,541,044	+				+0.4
3,541,045	-				+0.4
3,541,045	-				-1.6
3,541,064	+		LRK53_RS16105	0.11	-1.9
3,541,065	-		LRK53_RS16105	0.12	+0.6
3,541,065	-		LRK53_RS16105	0.12	-0.8
3,541,190	+		LRK53_RS16105	0.67	-0.1
3,541,190	+		LRK53_RS16105	0.67	+0.2
3,541,190	+		LRK53_RS16105	0.67	-0.9
3,541,191	-		LRK53_RS16105	0.68	+0.9
3,541,191	-		LRK53_RS16105	0.68	-1.6
3,541,191	-		LRK53_RS16105	0.68	-1.1
3,541,191	-		LRK53_RS16105	0.68	-0.8
3,541,208	+		LRK53_RS16105	0.75	-1.6
3,541,209	-		LRK53_RS16105	0.76	+0.4
3,541,209	-		LRK53_RS16105	0.76	-1.3
3,541,479	-				+0.1
3,541,571	+		LRK53_RS16110	0.19	-0.8
3,541,571	+		LRK53_RS16110	0.19	+0.3
3,541,571	+		LRK53_RS16110	0.19	-1.8
3,541,571	+		LRK53_RS16110	0.19	-2.3
3,541,571	+		LRK53_RS16110	0.19	-0.6
3,541,571	+		LRK53_RS16110	0.19	+0.0
3,541,572	-		LRK53_RS16110	0.19	-0.8
3,541,572	-		LRK53_RS16110	0.19	-2.3
3,541,572	-		LRK53_RS16110	0.19	+0.7
3,541,572	-		LRK53_RS16110	0.19	-1.8
3,541,572	-		LRK53_RS16110	0.19	-0.8
3,541,623	-		LRK53_RS16110	0.24	-0.3
3,541,623	-		LRK53_RS16110	0.24	+0.2
3,541,777	+		LRK53_RS16110	0.39	-1.5
3,541,816	+		LRK53_RS16110	0.43	-1.8
3,541,816	+		LRK53_RS16110	0.43	-1.9
3,541,816	+		LRK53_RS16110	0.43	-2.7
3,541,952	+		LRK53_RS16110	0.56	-0.7
3,541,952	+		LRK53_RS16110	0.56	-2.4
3,541,952	+		LRK53_RS16110	0.56	-1.0
3,541,952	+		LRK53_RS16110	0.56	-1.5
3,541,952	+		LRK53_RS16110	0.56	+0.7
3,541,953	-		LRK53_RS16110	0.56	-0.5
3,541,953	-		LRK53_RS16110	0.56	+1.7
3,541,953	-		LRK53_RS16110	0.56	-0.2
3,541,953	-		LRK53_RS16110	0.56	-0.9
3,541,953	-		LRK53_RS16110	0.56	+0.4
3,541,953	-		LRK53_RS16110	0.56	-0.1
3,542,141	+		LRK53_RS16110	0.75	+0.4
3,542,141	+		LRK53_RS16110	0.75	+0.5
3,542,141	+		LRK53_RS16110	0.75	-0.1
3,542,141	+		LRK53_RS16110	0.75	-1.7
3,542,141	+		LRK53_RS16110	0.75	-0.1
3,542,141	+		LRK53_RS16110	0.75	-2.0
3,542,141	+		LRK53_RS16110	0.75	-1.3
3,542,141	+		LRK53_RS16110	0.75	-0.9
3,542,141	+		LRK53_RS16110	0.75	-0.5
3,542,141	+		LRK53_RS16110	0.75	+0.9
3,542,141	+		LRK53_RS16110	0.75	-2.3
3,542,141	+		LRK53_RS16110	0.75	-2.0
3,542,141	+		LRK53_RS16110	0.75	-0.5
3,542,142	-		LRK53_RS16110	0.75	-0.1
3,542,142	-		LRK53_RS16110	0.75	+1.1
3,542,142	-		LRK53_RS16110	0.75	-1.2
3,542,142	-		LRK53_RS16110	0.75	-2.2
3,542,142	-		LRK53_RS16110	0.75	-1.0
3,542,142	-		LRK53_RS16110	0.75	+0.9
3,542,142	-		LRK53_RS16110	0.75	-1.5
3,542,142	-		LRK53_RS16110	0.75	-0.8
3,542,142	-		LRK53_RS16110	0.75	-1.7
3,542,142	-		LRK53_RS16110	0.75	-0.7
3,542,142	-		LRK53_RS16110	0.75	-2.9
3,542,142	-		LRK53_RS16110	0.75	+1.0
3,542,142	-		LRK53_RS16110	0.75	-0.7
3,542,142	-		LRK53_RS16110	0.75	-1.2
3,542,142	-		LRK53_RS16110	0.75	-1.5
3,542,142	-		LRK53_RS16110	0.75	-2.3
3,542,142	-		LRK53_RS16110	0.75	-1.5
3,542,142	-		LRK53_RS16110	0.75	-1.5
3,542,142	-		LRK53_RS16110	0.75	-1.0
3,542,142	-		LRK53_RS16110	0.75	-1.1
3,542,168	+		LRK53_RS16110	0.77	-0.2
3,542,168	+		LRK53_RS16110	0.77	+0.1
3,542,168	+		LRK53_RS16110	0.77	-0.8
3,542,168	+		LRK53_RS16110	0.77	-0.7
3,542,168	+		LRK53_RS16110	0.77	-2.1
3,542,168	+		LRK53_RS16110	0.77	-0.7
3,542,168	+		LRK53_RS16110	0.77	-0.6
3,542,168	+		LRK53_RS16110	0.77	-0.6
3,542,169	-		LRK53_RS16110	0.77	-0.2
3,542,169	-		LRK53_RS16110	0.77	-3.2
3,542,169	-		LRK53_RS16110	0.77	-0.4
3,542,169	-		LRK53_RS16110	0.77	-0.2
3,542,169	-		LRK53_RS16110	0.77	-1.4
3,542,169	-		LRK53_RS16110	0.77	-0.6
3,542,169	-		LRK53_RS16110	0.77	-0.1
3,542,169	-		LRK53_RS16110	0.77	-1.2
3,542,306	+				-1.2
3,542,307	-				+1.4
3,542,307	-				+0.2
3,542,307	-				-1.1
3,542,373	+				-0.3
3,542,373	+				-0.7