Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS15965

Experiment: planktonic; Day4; SGW;

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	planktonic; Day4; SGW;
3,502,180	-		LRK53_RS15960	0.47	-1.0
3,502,194	+		LRK53_RS15960	0.48	-0.5
3,502,194	+		LRK53_RS15960	0.48	-2.0
3,502,194	+		LRK53_RS15960	0.48	-0.7
3,502,194	+		LRK53_RS15960	0.48	+1.2
3,502,194	+		LRK53_RS15960	0.48	-1.0
3,502,195	-		LRK53_RS15960	0.48	-0.8
3,502,195	-		LRK53_RS15960	0.48	-0.1
3,502,195	-		LRK53_RS15960	0.48	-2.9
3,502,195	-		LRK53_RS15960	0.48	-1.0
3,502,284	+		LRK53_RS15960	0.55	-1.7
3,502,284	+		LRK53_RS15960	0.55	-2.0
3,502,284	+		LRK53_RS15960	0.55	-1.5
3,502,285	-		LRK53_RS15960	0.55	-2.5
3,502,285	-		LRK53_RS15960	0.55	-2.9
3,502,305	+		LRK53_RS15960	0.56	-0.3
3,502,305	+		LRK53_RS15960	0.56	+1.2
3,502,306	-		LRK53_RS15960	0.56	+0.5
3,502,600	-		LRK53_RS15960	0.79	-0.1
3,502,600	-		LRK53_RS15960	0.79	+0.2
3,502,600	-		LRK53_RS15960	0.79	-0.2
3,502,617	+		LRK53_RS15960	0.80	+0.7
3,502,617	+		LRK53_RS15960	0.80	+0.1
3,502,617	+		LRK53_RS15960	0.80	+0.7
3,502,617	+		LRK53_RS15960	0.80	+1.2
3,502,618	-		LRK53_RS15960	0.80	-0.5
3,502,618	-		LRK53_RS15960	0.80	-0.1
3,502,618	-		LRK53_RS15960	0.80	+0.1
3,502,618	-		LRK53_RS15960	0.80	+0.2
3,502,674	+		LRK53_RS15960	0.84	+0.2
3,502,839	+				+0.4
3,502,839	+				-2.0
3,502,840	-				-0.3
3,502,840	-				-0.7
3,502,840	-				-0.2
3,502,840	-				-2.1
3,502,840	-				+1.1
3,503,072	+		LRK53_RS15965	0.26	+0.3
3,503,072	+		LRK53_RS15965	0.26	-0.5
3,503,072	+		LRK53_RS15965	0.26	+0.2
3,503,072	+		LRK53_RS15965	0.26	+0.1
3,503,072	+		LRK53_RS15965	0.26	-0.5
3,503,072	+		LRK53_RS15965	0.26	-0.7
3,503,072	+		LRK53_RS15965	0.26	-0.6
3,503,072	+		LRK53_RS15965	0.26	-0.6
3,503,072	+		LRK53_RS15965	0.26	+1.2
3,503,073	-		LRK53_RS15965	0.26	-1.5
3,503,073	-		LRK53_RS15965	0.26	-1.4
3,503,073	-		LRK53_RS15965	0.26	-1.5
3,503,073	-		LRK53_RS15965	0.26	-2.0
3,503,073	-		LRK53_RS15965	0.26	-0.8
3,503,073	-		LRK53_RS15965	0.26	+0.5
3,503,108	+		LRK53_RS15965	0.33	-3.2
3,503,109	-		LRK53_RS15965	0.33	-0.2
3,503,109	-		LRK53_RS15965	0.33	+0.9
3,503,109	-		LRK53_RS15965	0.33	-0.1
3,503,109	-		LRK53_RS15965	0.33	+0.1
3,503,109	-		LRK53_RS15965	0.33	-0.5
3,503,109	-		LRK53_RS15965	0.33	-2.4
3,503,300	+		LRK53_RS15965	0.69	+0.9
3,503,300	+		LRK53_RS15965	0.69	-1.9
3,503,300	+		LRK53_RS15965	0.69	-0.3
3,503,605	+				-0.8
3,503,605	+				-0.8
3,503,605	+				-1.9
3,503,606	-				+0.8
3,503,606	-				+0.1
3,503,606	-				-1.6
3,503,620	+				-1.6
3,503,620	+				-2.7
3,503,620	+				-1.1
3,503,620	+				+0.1
3,503,620	+				-0.3
3,503,620	+				-1.8
3,503,620	+				-0.8
3,503,620	+				-2.1
3,503,620	+				-1.4
3,503,621	-				+0.8
3,503,621	-				-0.5
3,503,803	+		LRK53_RS15970	0.15	-0.9
3,503,803	+		LRK53_RS15970	0.15	-1.2
3,503,803	+		LRK53_RS15970	0.15	-1.3
3,503,804	-		LRK53_RS15970	0.15	-0.2
3,503,804	-		LRK53_RS15970	0.15	-1.9
3,503,804	-		LRK53_RS15970	0.15	-0.9
3,503,804	-		LRK53_RS15970	0.15	+0.7
3,503,804	-		LRK53_RS15970	0.15	-1.6
3,503,804	-		LRK53_RS15970	0.15	+0.1
3,504,061	+		LRK53_RS15970	0.26	+0.2
3,504,127	+		LRK53_RS15970	0.29	+0.8
3,504,127	+		LRK53_RS15970	0.29	-1.6
3,504,128	-		LRK53_RS15970	0.29	+0.5
3,504,128	-		LRK53_RS15970	0.29	-0.2
3,504,128	-		LRK53_RS15970	0.29	-0.3
3,504,128	-		LRK53_RS15970	0.29	+1.7
3,504,128	-		LRK53_RS15970	0.29	-2.0
3,504,128	-		LRK53_RS15970	0.29	-1.3
3,504,128	-		LRK53_RS15970	0.29	-1.9
3,504,128	-		LRK53_RS15970	0.29	-1.2
3,504,142	+		LRK53_RS15970	0.30	-0.9
3,504,142	+		LRK53_RS15970	0.30	-2.0
3,504,142	+		LRK53_RS15970	0.30	+0.1
3,504,142	+		LRK53_RS15970	0.30	-2.2
3,504,142	+		LRK53_RS15970	0.30	-0.6
3,504,142	+		LRK53_RS15970	0.30	+0.6
3,504,143	-		LRK53_RS15970	0.30	+0.2
3,504,143	-		LRK53_RS15970	0.30	-1.1
3,504,143	-		LRK53_RS15970	0.30	+0.2
3,504,143	-		LRK53_RS15970	0.30	+0.3
3,504,145	+		LRK53_RS15970	0.30	+0.5
3,504,145	+		LRK53_RS15970	0.30	+0.2
3,504,146	-		LRK53_RS15970	0.30	+1.3