Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS15005

Experiment: planktonic; Day4; SGW;

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	planktonic; Day4; SGW;
3,278,326	-				-1.2
3,278,326	-				-0.6
3,278,427	+				-1.9
3,278,427	+				-1.3
3,278,428	-				-1.9
3,278,428	-				-1.2
3,278,428	-				-0.5
3,278,700	-		LRK53_RS15000	0.38	+0.5
3,278,813	+		LRK53_RS15000	0.50	+0.1
3,278,813	+		LRK53_RS15000	0.50	+0.5
3,278,813	+		LRK53_RS15000	0.50	+1.3
3,278,813	+		LRK53_RS15000	0.50	-0.8
3,278,813	+		LRK53_RS15000	0.50	-0.6
3,278,814	-		LRK53_RS15000	0.51	-3.1
3,278,814	-		LRK53_RS15000	0.51	-0.2
3,279,283	+				+0.3
3,279,283	+				-1.5
3,279,283	+				-1.3
3,279,284	-				+2.0
3,279,284	-				-1.5
3,279,284	-				-0.5
3,279,439	+		LRK53_RS15005	0.12	+0.5
3,279,439	+		LRK53_RS15005	0.12	-0.8
3,279,439	+		LRK53_RS15005	0.12	-1.4
3,279,439	+		LRK53_RS15005	0.12	+0.7
3,279,439	+		LRK53_RS15005	0.12	-0.5
3,279,439	+		LRK53_RS15005	0.12	-1.1
3,279,439	+		LRK53_RS15005	0.12	-0.8
3,279,439	+		LRK53_RS15005	0.12	-0.7
3,279,439	+		LRK53_RS15005	0.12	-1.7
3,279,439	+		LRK53_RS15005	0.12	-0.6
3,279,440	-		LRK53_RS15005	0.12	+0.5
3,279,440	-		LRK53_RS15005	0.12	-0.6
3,279,544	+		LRK53_RS15005	0.20	-1.6
3,279,545	-		LRK53_RS15005	0.20	-0.1
3,279,695	+		LRK53_RS15005	0.32	-1.3
3,279,695	+		LRK53_RS15005	0.32	-0.3
3,279,695	+		LRK53_RS15005	0.32	-0.3
3,279,695	+		LRK53_RS15005	0.32	-0.2
3,279,696	-		LRK53_RS15005	0.32	-0.5
3,279,696	-		LRK53_RS15005	0.32	+0.7
3,279,696	-		LRK53_RS15005	0.32	+0.1
3,279,745	+		LRK53_RS15005	0.36	-1.1
3,279,745	+		LRK53_RS15005	0.36	+0.3
3,279,746	-		LRK53_RS15005	0.36	+0.5
3,279,754	+		LRK53_RS15005	0.37	+0.3
3,279,782	-		LRK53_RS15005	0.39	-2.0
3,280,003	+		LRK53_RS15005	0.56	+0.5
3,280,004	-		LRK53_RS15005	0.56	+1.7
3,280,004	-		LRK53_RS15005	0.56	-0.3
3,280,417	+		LRK53_RS15005	0.89	+0.4
3,280,417	+		LRK53_RS15005	0.89	+1.7
3,280,418	-		LRK53_RS15005	0.89	-1.0
3,280,675	+				-3.4
3,280,675	+				+1.9
3,280,675	+				-2.7
3,280,675	+				-2.2
3,280,675	+				-0.7
3,280,675	+				-0.7
3,280,675	+				-1.0
3,280,675	+				-1.3
3,280,675	+				-1.2
3,280,676	-				+0.3
3,280,696	+				+1.4
3,280,696	+				+0.2
3,280,696	+				-1.0
3,280,696	+				-2.9
3,280,696	+				-0.8
3,280,697	-				+1.3
3,280,697	-				+0.5
3,280,697	-				-2.7
3,280,733	+				-1.4
3,280,733	+				-1.6
3,280,733	+				-1.2
3,280,733	+				-0.3
3,280,733	+				-1.6
3,280,733	+				-0.1
3,280,733	+				-1.1
3,280,734	-				+1.9
3,280,734	-				+0.5
3,280,734	-				+0.1
3,280,734	-				-1.0
3,280,741	+				-1.0
3,280,741	+				+0.8
3,280,741	+				+0.9
3,280,741	+				-1.6
3,280,741	+				-1.1
3,280,741	+				-0.8
3,280,741	+				+2.0
3,280,741	+				+0.3
3,280,741	+				-0.2
3,280,742	-				+0.1
3,280,742	-				-0.9
3,280,742	-				-1.4
3,280,742	-				-0.8
3,280,742	-				-0.7
3,281,331	-		LRK53_RS15010	0.31	+0.3
3,281,331	-		LRK53_RS15010	0.31	+0.5
3,281,336	+		LRK53_RS15010	0.31	-0.9
3,281,336	+		LRK53_RS15010	0.31	+0.3
3,281,336	+		LRK53_RS15010	0.31	-0.6
3,281,336	+		LRK53_RS15010	0.31	-2.0
3,281,336	+		LRK53_RS15010	0.31	+0.7
3,281,336	+		LRK53_RS15010	0.31	-0.8
3,281,337	-		LRK53_RS15010	0.32	-1.2
3,281,337	-		LRK53_RS15010	0.32	+0.9
3,281,337	-		LRK53_RS15010	0.32	+0.7
3,281,337	-		LRK53_RS15010	0.32	-0.5
3,281,513	+		LRK53_RS15010	0.40	-1.5
3,281,513	+		LRK53_RS15010	0.40	-0.6
3,281,514	-		LRK53_RS15010	0.40	+0.5
3,281,514	-		LRK53_RS15010	0.40	-0.5
3,281,514	-		LRK53_RS15010	0.40	+2.4
3,281,514	-		LRK53_RS15010	0.40	-0.6
3,281,514	-		LRK53_RS15010	0.40	-1.6
3,281,514	-		LRK53_RS15010	0.40	+0.2
3,281,514	-		LRK53_RS15010	0.40	+0.0
3,281,548	-		LRK53_RS15010	0.42	-0.5