Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS14705

Experiment: planktonic; Day4; SGW;

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	planktonic; Day4; SGW;
3,218,717	+		LRK53_RS14695	0.81	+0.1
3,218,717	+		LRK53_RS14695	0.81	-0.5
3,218,717	+		LRK53_RS14695	0.81	-2.1
3,218,717	+		LRK53_RS14695	0.81	-1.3
3,218,717	+		LRK53_RS14695	0.81	-0.3
3,218,717	+		LRK53_RS14695	0.81	-3.5
3,218,717	+		LRK53_RS14695	0.81	+1.2
3,218,717	+		LRK53_RS14695	0.81	-3.6
3,218,717	+		LRK53_RS14695	0.81	-0.3
3,218,718	-		LRK53_RS14695	0.81	-0.2
3,218,718	-		LRK53_RS14695	0.81	-2.0
3,218,718	-		LRK53_RS14695	0.81	-2.1
3,218,718	-		LRK53_RS14695	0.81	-0.0
3,218,718	-		LRK53_RS14695	0.81	-1.3
3,218,718	-		LRK53_RS14695	0.81	-0.1
3,218,718	-		LRK53_RS14695	0.81	-1.1
3,218,718	-		LRK53_RS14695	0.81	-1.8
3,218,718	-		LRK53_RS14695	0.81	-1.1
3,218,718	-		LRK53_RS14695	0.81	-0.9
3,218,718	-		LRK53_RS14695	0.81	-1.1
3,218,723	+		LRK53_RS14695	0.82	-2.0
3,218,723	+		LRK53_RS14695	0.82	-0.5
3,218,723	+		LRK53_RS14695	0.82	+0.2
3,218,724	-		LRK53_RS14695	0.82	-1.9
3,218,724	-		LRK53_RS14695	0.82	-1.6
3,218,724	-		LRK53_RS14695	0.82	-1.1
3,218,724	-		LRK53_RS14695	0.82	-0.8
3,218,724	-		LRK53_RS14695	0.82	-1.9
3,218,828	+				-0.1
3,218,828	+				-2.7
3,218,828	+				-0.3
3,218,828	+				-0.9
3,218,828	+				+0.9
3,218,828	+				-0.4
3,218,828	+				+0.4
3,218,829	-				-0.4
3,218,829	-				-1.2
3,218,829	-				+0.3
3,218,929	+				+0.3
3,218,929	+				-1.8
3,218,930	-				-1.4
3,218,930	-				-1.4
3,218,930	-				-1.4
3,218,930	-				-1.7
3,218,997	+		LRK53_RS14700	0.10	-3.2
3,218,997	+		LRK53_RS14700	0.10	+1.3
3,218,997	+		LRK53_RS14700	0.10	-0.4
3,218,997	+		LRK53_RS14700	0.10	-0.4
3,218,997	+		LRK53_RS14700	0.10	-1.3
3,218,997	+		LRK53_RS14700	0.10	+0.7
3,218,997	+		LRK53_RS14700	0.10	+0.1
3,218,997	+		LRK53_RS14700	0.10	-1.8
3,218,997	+		LRK53_RS14700	0.10	-1.4
3,218,997	+		LRK53_RS14700	0.10	+0.1
3,218,997	+		LRK53_RS14700	0.10	+0.7
3,218,997	+		LRK53_RS14700	0.10	-3.2
3,218,997	+		LRK53_RS14700	0.10	-0.4
3,218,997	+		LRK53_RS14700	0.10	-0.1
3,218,997	+		LRK53_RS14700	0.10	-0.1
3,218,997	+		LRK53_RS14700	0.10	+0.4
3,218,997	+		LRK53_RS14700	0.10	-2.7
3,218,997	+		LRK53_RS14700	0.10	-0.7
3,218,997	+		LRK53_RS14700	0.10	-1.8
3,218,997	+		LRK53_RS14700	0.10	-0.3
3,218,997	+		LRK53_RS14700	0.10	+0.2
3,218,997	+		LRK53_RS14700	0.10	-1.2
3,218,997	+		LRK53_RS14700	0.10	-1.2
3,218,997	+		LRK53_RS14700	0.10	-1.3
3,218,997	+		LRK53_RS14700	0.10	-1.0
3,218,998	-		LRK53_RS14700	0.10	-2.3
3,218,998	-		LRK53_RS14700	0.10	-0.7
3,218,998	-		LRK53_RS14700	0.10	-0.7
3,218,998	-		LRK53_RS14700	0.10	+0.1
3,218,998	-		LRK53_RS14700	0.10	+0.1
3,218,998	-		LRK53_RS14700	0.10	-2.3
3,218,998	-		LRK53_RS14700	0.10	+1.7
3,218,998	-		LRK53_RS14700	0.10	-1.3
3,218,998	-		LRK53_RS14700	0.10	-0.7
3,218,998	-		LRK53_RS14700	0.10	-1.1
3,218,998	-		LRK53_RS14700	0.10	-1.2
3,218,998	-		LRK53_RS14700	0.10	-0.5
3,218,998	-		LRK53_RS14700	0.10	-1.6
3,218,998	-		LRK53_RS14700	0.10	-2.6
3,218,998	-		LRK53_RS14700	0.10	-1.0
3,218,998	-		LRK53_RS14700	0.10	-0.9
3,218,998	-		LRK53_RS14700	0.10	-1.5
3,218,998	-		LRK53_RS14700	0.10	-3.2
3,218,998	-		LRK53_RS14700	0.10	+0.3
3,218,998	-		LRK53_RS14700	0.10	-0.9
3,218,998	-		LRK53_RS14700	0.10	+0.0
3,218,998	-		LRK53_RS14700	0.10	-0.1
3,218,998	-		LRK53_RS14700	0.10	-1.7
3,218,998	-		LRK53_RS14700	0.10	-2.1
3,218,998	-		LRK53_RS14700	0.10	-2.9
3,218,998	-		LRK53_RS14700	0.10	-2.2
3,219,084	+		LRK53_RS14700	0.27	-0.6
3,219,084	+		LRK53_RS14700	0.27	+0.4
3,219,084	+		LRK53_RS14700	0.27	-2.1
3,219,269	+		LRK53_RS14700	0.63	-0.6
3,219,269	+		LRK53_RS14700	0.63	-1.4
3,219,269	+		LRK53_RS14700	0.63	+0.7
3,219,269	+		LRK53_RS14700	0.63	-3.5
3,219,269	+		LRK53_RS14700	0.63	+0.1
3,219,269	+		LRK53_RS14700	0.63	-0.5
3,219,269	+		LRK53_RS14700	0.63	-0.3
3,219,269	+		LRK53_RS14700	0.63	-1.2
3,219,269	+		LRK53_RS14700	0.63	+1.1
3,219,269	+		LRK53_RS14700	0.63	-1.9
3,219,269	+		LRK53_RS14700	0.63	-1.1
3,219,269	+		LRK53_RS14700	0.63	-1.7
3,219,269	+		LRK53_RS14700	0.63	-1.3
3,219,269	+		LRK53_RS14700	0.63	+1.1
3,219,270	-		LRK53_RS14700	0.63	-0.4
3,219,270	-		LRK53_RS14700	0.63	-1.0
3,219,270	-		LRK53_RS14700	0.63	-1.0
3,219,270	-		LRK53_RS14700	0.63	-1.5
3,219,270	-		LRK53_RS14700	0.63	+0.3
3,219,270	-		LRK53_RS14700	0.63	-0.6
3,219,270	-		LRK53_RS14700	0.63	-2.0
3,219,270	-		LRK53_RS14700	0.63	-0.8
3,219,270	-		LRK53_RS14700	0.63	-1.9
3,219,270	-		LRK53_RS14700	0.63	-0.5
3,219,270	-		LRK53_RS14700	0.63	+0.4
3,219,270	-		LRK53_RS14700	0.63	+0.4
3,219,270	-		LRK53_RS14700	0.63	-1.3
3,219,270	-		LRK53_RS14700	0.63	-1.1
3,219,270	-		LRK53_RS14700	0.63	-2.9
3,219,270	-		LRK53_RS14700	0.63	+2.3
3,219,270	-		LRK53_RS14700	0.63	-1.2
3,219,315	+		LRK53_RS14700	0.72	-0.1
3,219,315	+		LRK53_RS14700	0.72	-1.0
3,219,316	-		LRK53_RS14700	0.72	-3.1
3,219,316	-		LRK53_RS14700	0.72	+0.9
3,219,435	+				-0.7
3,219,435	+				-0.7
3,219,435	+				-0.3
3,219,435	+				-0.9
3,219,436	-				-1.2
3,219,436	-				-0.4
3,219,464	+				-2.2
3,219,464	+				+0.9
3,219,464	+				-1.8
3,219,464	+				-2.1
3,219,464	+				+0.1
3,219,464	+				+0.4
3,219,464	+				-0.1
3,219,464	+				+0.8
3,219,464	+				-0.6
3,219,464	+				+0.9
3,219,465	-				-0.4
3,219,465	-				-1.4
3,219,465	-				+0.3
3,219,465	-				+0.1
3,219,465	-				-1.1
3,219,465	-				-0.2
3,219,465	-				+0.3
3,219,465	-				-3.3
3,219,465	-				-1.8
3,219,465	-				-2.0
3,219,465	-				-0.3
3,219,465	-				+0.9
3,219,954	+		LRK53_RS14705	0.27	-0.6
3,219,954	+		LRK53_RS14705	0.27	-1.6
3,219,955	-		LRK53_RS14705	0.27	-2.5
3,219,955	-		LRK53_RS14705	0.27	-0.4
3,219,955	-		LRK53_RS14705	0.27	+1.6
3,220,082	+		LRK53_RS14705	0.36	-1.0
3,220,083	-		LRK53_RS14705	0.36	+0.6
3,220,083	-		LRK53_RS14705	0.36	+0.3
3,220,083	-		LRK53_RS14705	0.36	+2.2
3,220,083	-		LRK53_RS14705	0.36	+0.1
3,220,425	+		LRK53_RS14705	0.59	-1.5
3,220,425	+		LRK53_RS14705	0.59	+0.8
3,220,425	+		LRK53_RS14705	0.59	-0.7
3,220,425	+		LRK53_RS14705	0.59	-0.8
3,220,425	+		LRK53_RS14705	0.59	-0.8
3,220,425	+		LRK53_RS14705	0.59	-0.2
3,220,425	+		LRK53_RS14705	0.59	-0.7
3,220,425	+		LRK53_RS14705	0.59	+1.5
3,220,425	+		LRK53_RS14705	0.59	-0.3
3,220,425	+		LRK53_RS14705	0.59	-1.3
3,220,425	+		LRK53_RS14705	0.59	-0.7
3,220,425	+		LRK53_RS14705	0.59	-2.7
3,220,425	+		LRK53_RS14705	0.59	-0.7
3,220,425	+		LRK53_RS14705	0.59	-1.7
3,220,425	+		LRK53_RS14705	0.59	+1.1
3,220,425	+		LRK53_RS14705	0.59	-0.2
3,220,425	+		LRK53_RS14705	0.59	-0.3
3,220,425	+		LRK53_RS14705	0.59	+0.3
3,220,426	-		LRK53_RS14705	0.59	-0.4
3,220,426	-		LRK53_RS14705	0.59	-0.7
3,220,426	-		LRK53_RS14705	0.59	+0.7
3,220,426	-		LRK53_RS14705	0.59	-2.8
3,220,426	-		LRK53_RS14705	0.59	-3.1
3,220,426	-		LRK53_RS14705	0.59	+0.6
3,220,426	-		LRK53_RS14705	0.59	-2.8
3,220,426	-		LRK53_RS14705	0.59	-1.7
3,220,426	-		LRK53_RS14705	0.59	+0.8
3,220,426	-		LRK53_RS14705	0.59	+1.7
3,220,426	-		LRK53_RS14705	0.59	-0.3
3,220,426	-		LRK53_RS14705	0.59	-1.0
3,220,426	-		LRK53_RS14705	0.59	+0.0
3,220,426	-		LRK53_RS14705	0.59	-0.4
3,220,426	-		LRK53_RS14705	0.59	-2.2
3,220,426	-		LRK53_RS14705	0.59	-0.9
3,220,426	-		LRK53_RS14705	0.59	-0.1
3,220,608	+		LRK53_RS14705	0.72	-0.4
3,220,608	+		LRK53_RS14705	0.72	-0.8
3,220,608	+		LRK53_RS14705	0.72	+0.1
3,220,608	+		LRK53_RS14705	0.72	+0.9
3,220,608	+		LRK53_RS14705	0.72	+0.4
3,220,608	+		LRK53_RS14705	0.72	-1.1
3,220,608	+		LRK53_RS14705	0.72	-2.4
3,220,609	-		LRK53_RS14705	0.72	-0.0
3,220,609	-		LRK53_RS14705	0.72	+2.8
3,220,609	-		LRK53_RS14705	0.72	-1.8
3,220,663	+		LRK53_RS14705	0.76	+0.0
3,220,663	+		LRK53_RS14705	0.76	-1.6
3,220,663	+		LRK53_RS14705	0.76	+1.3
3,220,663	+		LRK53_RS14705	0.76	+1.0
3,220,664	-		LRK53_RS14705	0.76	-0.3
3,220,664	-		LRK53_RS14705	0.76	-0.5
3,221,014	+				-0.3
3,221,014	+				-0.5
3,221,014	+				-0.4
3,221,014	+				-0.8
3,221,014	+				+0.4
3,221,014	+				+0.3
3,221,014	+				+1.6
3,221,014	+				-0.6
3,221,014	+				+0.3
3,221,014	+				+1.3
3,221,014	+				-1.3
3,221,014	+				+0.3
3,221,014	+				+0.1
3,221,014	+				+0.9
3,221,014	+				-2.8
3,221,014	+				+0.6
3,221,014	+				-2.0
3,221,015	-				-0.7
3,221,015	-				+0.4
3,221,015	-				-0.6
3,221,015	-				-2.0
3,221,015	-				-2.1
3,221,015	-				-0.3
3,221,015	-				-0.2
3,221,015	-				+1.7
3,221,015	-				-0.7
3,221,015	-				-1.0
3,221,015	-				+0.9
3,221,123	+		LRK53_RS14710	0.11	-2.0
3,221,123	+		LRK53_RS14710	0.11	+0.1
3,221,123	+		LRK53_RS14710	0.11	-0.4
3,221,123	+		LRK53_RS14710	0.11	+0.4
3,221,123	+		LRK53_RS14710	0.11	-1.6
3,221,123	+		LRK53_RS14710	0.11	-1.0
3,221,123	+		LRK53_RS14710	0.11	+0.3
3,221,123	+		LRK53_RS14710	0.11	-0.2
3,221,123	+		LRK53_RS14710	0.11	-0.1
3,221,123	+		LRK53_RS14710	0.11	-0.5
3,221,123	+		LRK53_RS14710	0.11	-2.0
3,221,123	+		LRK53_RS14710	0.11	-2.1
3,221,123	+		LRK53_RS14710	0.11	-1.3
3,221,123	+		LRK53_RS14710	0.11	+0.3
3,221,123	+		LRK53_RS14710	0.11	-0.3
3,221,123	+		LRK53_RS14710	0.11	-0.8
3,221,123	+		LRK53_RS14710	0.11	+0.9
3,221,123	+		LRK53_RS14710	0.11	-0.3
3,221,123	+		LRK53_RS14710	0.11	-2.8
3,221,123	+		LRK53_RS14710	0.11	-1.2
3,221,123	+		LRK53_RS14710	0.11	+0.7
3,221,124	-		LRK53_RS14710	0.11	-0.4
3,221,124	-		LRK53_RS14710	0.11	+0.4
3,221,124	-		LRK53_RS14710	0.11	+0.7
3,221,124	-		LRK53_RS14710	0.11	-0.4
3,221,124	-		LRK53_RS14710	0.11	-2.7
3,221,124	-		LRK53_RS14710	0.11	+0.1
3,221,124	-		LRK53_RS14710	0.11	-0.8
3,221,124	-		LRK53_RS14710	0.11	-1.7
3,221,124	-		LRK53_RS14710	0.11	+1.3
3,221,124	-		LRK53_RS14710	0.11	-0.9
3,221,124	-		LRK53_RS14710	0.11	+0.4
3,221,124	-		LRK53_RS14710	0.11	-1.2
3,221,124	-		LRK53_RS14710	0.11	+2.4
3,221,124	-		LRK53_RS14710	0.11	+0.2
3,221,124	-		LRK53_RS14710	0.11	+0.9
3,221,124	-		LRK53_RS14710	0.11	-2.3
3,221,124	-		LRK53_RS14710	0.11	-2.2
3,221,124	-		LRK53_RS14710	0.11	-1.5
3,221,124	-		LRK53_RS14710	0.11	-1.3
3,221,124	-		LRK53_RS14710	0.11	+0.1
3,221,124	-		LRK53_RS14710	0.11	-2.4
3,221,124	-		LRK53_RS14710	0.11	-1.6
3,221,124	-		LRK53_RS14710	0.11	-2.6
3,221,124	-		LRK53_RS14710	0.11	-1.4
3,221,124	-		LRK53_RS14710	0.11	-0.4
3,221,124	-		LRK53_RS14710	0.11	-2.6
3,221,124	-		LRK53_RS14710	0.11	-1.8
3,221,124	-		LRK53_RS14710	0.11	-0.3
3,221,124	-		LRK53_RS14710	0.11	-0.1
3,221,151	+		LRK53_RS14710	0.14	-2.9
3,221,151	+		LRK53_RS14710	0.14	-0.1
3,221,151	+		LRK53_RS14710	0.14	+0.8
3,221,151	+		LRK53_RS14710	0.14	-1.1
3,221,151	+		LRK53_RS14710	0.14	-0.2
3,221,151	+		LRK53_RS14710	0.14	-0.4
3,221,152	-		LRK53_RS14710	0.14	+0.4
3,221,152	-		LRK53_RS14710	0.14	-1.0
3,221,152	-		LRK53_RS14710	0.14	-0.9
3,221,152	-		LRK53_RS14710	0.14	-1.1
3,221,152	-		LRK53_RS14710	0.14	-0.3
3,221,591	+		LRK53_RS14710	0.57	-0.3
3,221,591	+		LRK53_RS14710	0.57	+0.4
3,221,592	-		LRK53_RS14710	0.57	+1.0
3,221,592	-		LRK53_RS14710	0.57	-1.5
3,221,592	-		LRK53_RS14710	0.57	-0.4
3,221,592	-		LRK53_RS14710	0.57	-0.3
3,221,592	-		LRK53_RS14710	0.57	-0.6
3,221,852	+		LRK53_RS14710	0.82	-0.2
3,221,852	+		LRK53_RS14710	0.82	-0.4
3,221,852	+		LRK53_RS14710	0.82	-0.7
3,221,852	+		LRK53_RS14710	0.82	-0.1
3,221,852	+		LRK53_RS14710	0.82	+0.1
3,221,852	+		LRK53_RS14710	0.82	-0.3
3,221,852	+		LRK53_RS14710	0.82	+0.3
3,221,852	+		LRK53_RS14710	0.82	-0.9
3,221,853	-		LRK53_RS14710	0.82	-0.1
3,221,853	-		LRK53_RS14710	0.82	-2.3
3,221,853	-		LRK53_RS14710	0.82	-1.1
3,221,853	-		LRK53_RS14710	0.82	+0.3
3,221,853	-		LRK53_RS14710	0.82	-0.4
3,221,853	-		LRK53_RS14710	0.82	+0.3
3,221,853	-		LRK53_RS14710	0.82	-1.0
3,221,956	+				-0.9
3,221,956	+				-0.9
3,221,957	-				+0.4
3,221,978	+				-0.3
3,221,978	+				-0.6
3,221,978	+				-1.2
3,221,978	+				-0.6
3,221,978	+				-0.4
3,221,978	+				+0.4
3,221,979	-				-1.9
3,221,979	-				-0.7
3,221,979	-				+1.7