Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS14305

Experiment: planktonic; Day4; SGW;

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	planktonic; Day4; SGW;
3,135,897	+		LRK53_RS14300	0.31	+0.4
3,135,898	-		LRK53_RS14300	0.31	-2.3
3,135,996	-		LRK53_RS14300	0.40	-0.4
3,135,996	-		LRK53_RS14300	0.40	-1.1
3,135,996	-		LRK53_RS14300	0.40	-1.4
3,136,208	+		LRK53_RS14300	0.60	-0.5
3,136,362	-		LRK53_RS14300	0.74	-3.1
3,136,362	-		LRK53_RS14300	0.74	-0.9
3,136,362	-		LRK53_RS14300	0.74	+1.3
3,136,362	-		LRK53_RS14300	0.74	-1.0
3,136,362	-		LRK53_RS14300	0.74	-0.5
3,136,362	-		LRK53_RS14300	0.74	+0.8
3,136,362	-		LRK53_RS14300	0.74	+1.4
3,136,436	+		LRK53_RS14300	0.81	-1.2
3,136,436	+		LRK53_RS14300	0.81	-0.7
3,136,436	+		LRK53_RS14300	0.81	-0.8
3,136,437	-		LRK53_RS14300	0.81	-3.3
3,136,437	-		LRK53_RS14300	0.81	-0.6
3,136,735	+				-1.1
3,136,735	+				-2.0
3,136,736	-				-0.7
3,136,774	+				-1.9
3,136,775	-				-1.4
3,136,775	-				-2.5
3,136,813	+				-1.2
3,136,813	+				-2.0
3,136,813	+				-0.7
3,136,813	+				-1.5
3,136,837	+				+1.9
3,136,838	-				-0.4
3,136,877	-		LRK53_RS14305	0.11	-1.2
3,136,996	+		LRK53_RS14305	0.16	-1.2
3,136,997	-		LRK53_RS14305	0.16	-1.2
3,136,997	-		LRK53_RS14305	0.16	-0.3
3,136,997	-		LRK53_RS14305	0.16	-1.0
3,136,997	-		LRK53_RS14305	0.16	-3.1
3,136,997	-		LRK53_RS14305	0.16	-0.6
3,137,014	+		LRK53_RS14305	0.17	-0.0
3,137,221	+		LRK53_RS14305	0.27	+0.3
3,137,222	-		LRK53_RS14305	0.27	+0.2
3,137,392	+		LRK53_RS14305	0.34	-1.7
3,137,392	+		LRK53_RS14305	0.34	-0.8
3,137,393	-		LRK53_RS14305	0.34	-1.9
3,137,393	-		LRK53_RS14305	0.34	-2.3
3,137,393	-		LRK53_RS14305	0.34	-0.9
3,137,515	+		LRK53_RS14305	0.40	-0.1
3,137,515	+		LRK53_RS14305	0.40	-1.4
3,137,515	+		LRK53_RS14305	0.40	-0.4
3,137,515	+		LRK53_RS14305	0.40	-2.0
3,137,516	-		LRK53_RS14305	0.40	-2.4
3,137,516	-		LRK53_RS14305	0.40	-0.5
3,137,516	-		LRK53_RS14305	0.40	-1.8
3,137,516	-		LRK53_RS14305	0.40	+0.4
3,137,516	-		LRK53_RS14305	0.40	-1.0
3,137,516	-		LRK53_RS14305	0.40	-0.5
3,137,537	-		LRK53_RS14305	0.41	+0.8
3,137,767	+		LRK53_RS14305	0.52	-2.2
3,137,767	+		LRK53_RS14305	0.52	-2.6
3,137,767	+		LRK53_RS14305	0.52	-0.7
3,137,767	+		LRK53_RS14305	0.52	-0.6
3,137,767	+		LRK53_RS14305	0.52	+0.4
3,137,767	+		LRK53_RS14305	0.52	-2.2
3,137,767	+		LRK53_RS14305	0.52	-0.3
3,137,767	+		LRK53_RS14305	0.52	-1.5
3,137,767	+		LRK53_RS14305	0.52	-0.2
3,137,767	+		LRK53_RS14305	0.52	-0.6
3,137,767	+		LRK53_RS14305	0.52	-0.3
3,137,767	+		LRK53_RS14305	0.52	-0.8
3,137,768	-		LRK53_RS14305	0.52	-1.3
3,137,768	-		LRK53_RS14305	0.52	-0.4
3,137,768	-		LRK53_RS14305	0.52	-0.0
3,137,768	-		LRK53_RS14305	0.52	-2.4
3,137,768	-		LRK53_RS14305	0.52	-0.3
3,137,768	-		LRK53_RS14305	0.52	+0.8
3,137,788	+		LRK53_RS14305	0.52	-0.1
3,137,806	+		LRK53_RS14305	0.53	-1.2
3,137,806	+		LRK53_RS14305	0.53	-2.0
3,137,807	-		LRK53_RS14305	0.53	+0.2
3,137,807	-		LRK53_RS14305	0.53	-0.9
3,137,882	+		LRK53_RS14305	0.57	+0.4
3,137,882	+		LRK53_RS14305	0.57	-1.1
3,137,882	+		LRK53_RS14305	0.57	+1.2
3,137,882	+		LRK53_RS14305	0.57	-1.2
3,137,882	+		LRK53_RS14305	0.57	+0.2
3,137,882	+		LRK53_RS14305	0.57	+0.5
3,137,883	-		LRK53_RS14305	0.57	-1.5
3,137,883	-		LRK53_RS14305	0.57	-0.8
3,137,883	-		LRK53_RS14305	0.57	-0.3
3,137,883	-		LRK53_RS14305	0.57	-1.3
3,137,883	-		LRK53_RS14305	0.57	-2.3
3,137,883	-		LRK53_RS14305	0.57	-1.4
3,138,016	+		LRK53_RS14305	0.63	-0.9
3,138,016	+		LRK53_RS14305	0.63	-1.9
3,138,016	+		LRK53_RS14305	0.63	-1.5
3,138,016	+		LRK53_RS14305	0.63	-1.3
3,138,017	-		LRK53_RS14305	0.63	-1.2
3,138,193	+		LRK53_RS14305	0.71	+0.4
3,138,193	+		LRK53_RS14305	0.71	+0.6
3,138,193	+		LRK53_RS14305	0.71	+0.5
3,138,193	+		LRK53_RS14305	0.71	-1.8
3,138,193	+		LRK53_RS14305	0.71	-0.4
3,138,193	+		LRK53_RS14305	0.71	-1.9
3,138,194	-		LRK53_RS14305	0.71	+0.2
3,138,194	-		LRK53_RS14305	0.71	-1.0
3,138,194	-		LRK53_RS14305	0.71	-0.3
3,138,194	-		LRK53_RS14305	0.71	-1.4
3,138,194	-		LRK53_RS14305	0.71	-0.2
3,138,194	-		LRK53_RS14305	0.71	+0.2
3,138,194	-		LRK53_RS14305	0.71	+0.4
3,138,286	+		LRK53_RS14305	0.75	-1.2
3,138,287	-		LRK53_RS14305	0.75	+0.7
3,138,287	-		LRK53_RS14305	0.75	-1.8
3,138,287	-		LRK53_RS14305	0.75	-0.7
3,138,287	-		LRK53_RS14305	0.75	-0.0
3,138,316	+		LRK53_RS14305	0.77	-3.7
3,138,316	+		LRK53_RS14305	0.77	+0.8
3,138,316	+		LRK53_RS14305	0.77	-0.8
3,138,316	+		LRK53_RS14305	0.77	+0.4
3,138,316	+		LRK53_RS14305	0.77	-1.6
3,138,316	+		LRK53_RS14305	0.77	-1.4
3,138,316	+		LRK53_RS14305	0.77	-0.5
3,138,316	+		LRK53_RS14305	0.77	-1.5
3,138,316	+		LRK53_RS14305	0.77	-0.9
3,138,316	+		LRK53_RS14305	0.77	-2.4
3,138,316	+		LRK53_RS14305	0.77	-2.7
3,138,316	+		LRK53_RS14305	0.77	-1.2
3,138,316	+		LRK53_RS14305	0.77	+1.3
3,138,316	+		LRK53_RS14305	0.77	+0.5
3,138,316	+		LRK53_RS14305	0.77	-0.7
3,138,316	+		LRK53_RS14305	0.77	-1.2
3,138,316	+		LRK53_RS14305	0.77	-0.8
3,138,316	+		LRK53_RS14305	0.77	-0.6
3,138,316	+		LRK53_RS14305	0.77	-1.0
3,138,316	+		LRK53_RS14305	0.77	-1.5
3,138,316	+		LRK53_RS14305	0.77	-1.4
3,138,316	+		LRK53_RS14305	0.77	+0.1
3,138,316	+		LRK53_RS14305	0.77	-0.3
3,138,316	+		LRK53_RS14305	0.77	-0.4
3,138,317	-		LRK53_RS14305	0.77	+1.4
3,138,317	-		LRK53_RS14305	0.77	-0.3
3,138,317	-		LRK53_RS14305	0.77	-0.9
3,138,317	-		LRK53_RS14305	0.77	+0.2
3,138,317	-		LRK53_RS14305	0.77	+0.5
3,138,317	-		LRK53_RS14305	0.77	-1.0
3,138,317	-		LRK53_RS14305	0.77	-0.7
3,138,317	-		LRK53_RS14305	0.77	+1.2
3,138,317	-		LRK53_RS14305	0.77	-2.6
3,138,317	-		LRK53_RS14305	0.77	-1.9
3,138,317	-		LRK53_RS14305	0.77	-2.9
3,138,317	-		LRK53_RS14305	0.77	-0.9
3,138,317	-		LRK53_RS14305	0.77	-0.8
3,138,317	-		LRK53_RS14305	0.77	-0.4
3,138,317	-		LRK53_RS14305	0.77	-1.2
3,138,317	-		LRK53_RS14305	0.77	+0.2
3,138,317	-		LRK53_RS14305	0.77	-0.7
3,138,317	-		LRK53_RS14305	0.77	-0.3
3,138,317	-		LRK53_RS14305	0.77	-1.3
3,138,376	+		LRK53_RS14305	0.79	-0.5
3,138,377	-		LRK53_RS14305	0.79	-1.4
3,138,436	+		LRK53_RS14305	0.82	-0.6
3,138,436	+		LRK53_RS14305	0.82	-0.3
3,138,436	+		LRK53_RS14305	0.82	-0.5
3,138,437	-		LRK53_RS14305	0.82	-2.8
3,138,437	-		LRK53_RS14305	0.82	+0.9
3,138,437	-		LRK53_RS14305	0.82	+0.5
3,138,437	-		LRK53_RS14305	0.82	-0.9
3,138,437	-		LRK53_RS14305	0.82	-0.0
3,138,437	-		LRK53_RS14305	0.82	-0.2
3,138,445	+		LRK53_RS14305	0.82	-1.9
3,138,490	+		LRK53_RS14305	0.84	+0.2
3,138,490	+		LRK53_RS14305	0.84	+0.1
3,138,490	+		LRK53_RS14305	0.84	-1.5
3,138,491	-		LRK53_RS14305	0.84	-1.3
3,138,499	+		LRK53_RS14305	0.85	-2.7
3,138,499	+		LRK53_RS14305	0.85	+0.1
3,138,499	+		LRK53_RS14305	0.85	-0.3
3,138,500	-		LRK53_RS14305	0.85	-2.7
3,138,664	+				-0.7
3,138,665	-				-1.9
3,138,688	+				+1.6
3,138,688	+				-2.0
3,138,688	+				-0.1
3,138,688	+				-1.5
3,138,688	+				-1.4
3,138,689	-				+0.4
3,139,115	+		LRK53_RS14310	0.13	+0.1
3,139,115	+		LRK53_RS14310	0.13	+0.4
3,139,115	+		LRK53_RS14310	0.13	+0.2
3,139,115	+		LRK53_RS14310	0.13	-0.4
3,139,115	+		LRK53_RS14310	0.13	+0.3
3,139,116	-		LRK53_RS14310	0.13	-0.7
3,139,118	+		LRK53_RS14310	0.13	-0.1
3,139,118	+		LRK53_RS14310	0.13	-0.5
3,139,118	+		LRK53_RS14310	0.13	-0.0
3,139,119	-		LRK53_RS14310	0.13	-1.7
3,139,119	-		LRK53_RS14310	0.13	+0.4
3,139,119	-		LRK53_RS14310	0.13	-1.5
3,139,322	+		LRK53_RS14310	0.24	-1.1
3,139,323	-		LRK53_RS14310	0.24	+0.8
3,139,334	+		LRK53_RS14310	0.24	+1.9
3,139,334	+		LRK53_RS14310	0.24	+1.6
3,139,335	-		LRK53_RS14310	0.24	-1.4
3,139,335	-		LRK53_RS14310	0.24	-0.0
3,139,335	-		LRK53_RS14310	0.24	-0.2
3,139,335	-		LRK53_RS14310	0.24	+0.4
3,139,335	-		LRK53_RS14310	0.24	+0.8
3,139,335	-		LRK53_RS14310	0.24	-2.2
3,139,335	-		LRK53_RS14310	0.24	-0.2
3,139,472	+		LRK53_RS14310	0.31	-1.2
3,139,473	-		LRK53_RS14310	0.31	-2.4
3,139,473	-		LRK53_RS14310	0.31	-0.5
3,139,545	-		LRK53_RS14310	0.35	+0.1
3,139,545	-		LRK53_RS14310	0.35	+0.7
3,139,545	-		LRK53_RS14310	0.35	+0.2
3,139,637	+		LRK53_RS14310	0.40	-2.0
3,139,649	+		LRK53_RS14310	0.40	-0.3
3,139,649	+		LRK53_RS14310	0.40	-1.8
3,139,649	+		LRK53_RS14310	0.40	+0.5
3,139,649	+		LRK53_RS14310	0.40	-1.7
3,139,649	+		LRK53_RS14310	0.40	+0.5
3,139,649	+		LRK53_RS14310	0.40	-0.2
3,139,650	-		LRK53_RS14310	0.41	-0.3
3,139,650	-		LRK53_RS14310	0.41	-0.4
3,139,650	-		LRK53_RS14310	0.41	-1.3
3,139,650	-		LRK53_RS14310	0.41	-0.3
3,139,650	-		LRK53_RS14310	0.41	-1.9
3,139,650	-		LRK53_RS14310	0.41	-2.4
3,139,650	-		LRK53_RS14310	0.41	-0.3
3,139,650	-		LRK53_RS14310	0.41	-0.3
3,139,667	+		LRK53_RS14310	0.41	+0.2
3,139,667	+		LRK53_RS14310	0.41	-1.0
3,139,667	+		LRK53_RS14310	0.41	-0.0
3,139,667	+		LRK53_RS14310	0.41	+0.6
3,139,668	-		LRK53_RS14310	0.41	-0.3
3,139,668	-		LRK53_RS14310	0.41	-1.4
3,139,668	-		LRK53_RS14310	0.41	+0.4