Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS13900

Experiment: planktonic; Day4; SGW;

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	planktonic; Day4; SGW;
3,061,299	+		LRK53_RS13890	0.61	-0.2
3,061,299	+		LRK53_RS13890	0.61	+0.1
3,061,299	+		LRK53_RS13890	0.61	+0.9
3,061,299	+		LRK53_RS13890	0.61	-2.3
3,061,299	+		LRK53_RS13890	0.61	-1.4
3,061,299	+		LRK53_RS13890	0.61	-0.8
3,061,299	+		LRK53_RS13890	0.61	+1.3
3,061,299	+		LRK53_RS13890	0.61	+0.3
3,061,299	+		LRK53_RS13890	0.61	-0.1
3,061,300	-		LRK53_RS13890	0.61	-1.1
3,061,300	-		LRK53_RS13890	0.61	-2.8
3,061,300	-		LRK53_RS13890	0.61	-0.8
3,061,300	-		LRK53_RS13890	0.61	-0.8
3,061,300	-		LRK53_RS13890	0.61	-1.5
3,061,300	-		LRK53_RS13890	0.61	-0.7
3,061,300	-		LRK53_RS13890	0.61	-0.7
3,061,300	-		LRK53_RS13890	0.61	-2.3
3,061,300	-		LRK53_RS13890	0.61	+0.8
3,061,300	-		LRK53_RS13890	0.61	-0.3
3,061,317	+		LRK53_RS13890	0.65	-1.4
3,061,317	+		LRK53_RS13890	0.65	-1.1
3,061,317	+		LRK53_RS13890	0.65	-0.8
3,061,317	+		LRK53_RS13890	0.65	-1.9
3,061,318	-		LRK53_RS13890	0.65	+0.1
3,061,318	-		LRK53_RS13890	0.65	-0.0
3,061,318	-		LRK53_RS13890	0.65	-0.2
3,061,318	-		LRK53_RS13890	0.65	-0.0
3,061,320	+		LRK53_RS13890	0.66	-0.9
3,061,320	+		LRK53_RS13890	0.66	-1.9
3,061,320	+		LRK53_RS13890	0.66	+0.3
3,061,320	+		LRK53_RS13890	0.66	-2.0
3,061,320	+		LRK53_RS13890	0.66	+0.8
3,061,320	+		LRK53_RS13890	0.66	-1.5
3,061,320	+		LRK53_RS13890	0.66	-1.6
3,061,320	+		LRK53_RS13890	0.66	-1.4
3,061,320	+		LRK53_RS13890	0.66	+0.7
3,061,320	+		LRK53_RS13890	0.66	-1.0
3,061,320	+		LRK53_RS13890	0.66	-1.5
3,061,320	+		LRK53_RS13890	0.66	-2.6
3,061,320	+		LRK53_RS13890	0.66	-2.1
3,061,320	+		LRK53_RS13890	0.66	-1.3
3,061,320	+		LRK53_RS13890	0.66	-0.0
3,061,320	+		LRK53_RS13890	0.66	-0.3
3,061,320	+		LRK53_RS13890	0.66	+0.1
3,061,320	+		LRK53_RS13890	0.66	-1.8
3,061,320	+		LRK53_RS13890	0.66	-1.0
3,061,320	+		LRK53_RS13890	0.66	+0.8
3,061,320	+		LRK53_RS13890	0.66	+0.3
3,061,320	+		LRK53_RS13890	0.66	-0.5
3,061,320	+		LRK53_RS13890	0.66	+1.7
3,061,320	+		LRK53_RS13890	0.66	-0.2
3,061,320	+		LRK53_RS13890	0.66	+0.8
3,061,320	+		LRK53_RS13890	0.66	+0.8
3,061,320	+		LRK53_RS13890	0.66	+0.8
3,061,320	+		LRK53_RS13890	0.66	-1.7
3,061,320	+		LRK53_RS13890	0.66	-1.7
3,061,320	+		LRK53_RS13890	0.66	+1.5
3,061,320	+		LRK53_RS13890	0.66	-0.6
3,061,320	+		LRK53_RS13890	0.66	-0.0
3,061,321	-		LRK53_RS13890	0.66	-0.9
3,061,321	-		LRK53_RS13890	0.66	-0.6
3,061,321	-		LRK53_RS13890	0.66	-1.6
3,061,321	-		LRK53_RS13890	0.66	-0.7
3,061,321	-		LRK53_RS13890	0.66	-2.9
3,061,321	-		LRK53_RS13890	0.66	-0.2
3,061,321	-		LRK53_RS13890	0.66	-1.2
3,061,321	-		LRK53_RS13890	0.66	-1.0
3,061,321	-		LRK53_RS13890	0.66	-1.8
3,061,321	-		LRK53_RS13890	0.66	-0.9
3,061,321	-		LRK53_RS13890	0.66	-0.5
3,061,321	-		LRK53_RS13890	0.66	-0.6
3,061,321	-		LRK53_RS13890	0.66	+0.1
3,061,321	-		LRK53_RS13890	0.66	-0.7
3,061,321	-		LRK53_RS13890	0.66	-1.1
3,061,321	-		LRK53_RS13890	0.66	-0.3
3,061,321	-		LRK53_RS13890	0.66	-1.0
3,061,321	-		LRK53_RS13890	0.66	+1.0
3,061,321	-		LRK53_RS13890	0.66	-1.8
3,061,341	+		LRK53_RS13890	0.71	-0.5
3,061,341	+		LRK53_RS13890	0.71	+0.3
3,061,341	+		LRK53_RS13890	0.71	-0.9
3,061,341	+		LRK53_RS13890	0.71	-2.2
3,061,341	+		LRK53_RS13890	0.71	-1.8
3,061,341	+		LRK53_RS13890	0.71	+0.5
3,061,341	+		LRK53_RS13890	0.71	-1.1
3,061,342	-		LRK53_RS13890	0.71	-0.5
3,061,342	-		LRK53_RS13890	0.71	-0.5
3,061,342	-		LRK53_RS13890	0.71	-0.9
3,061,342	-		LRK53_RS13890	0.71	-1.5
3,061,342	-		LRK53_RS13890	0.71	-1.2
3,061,342	-		LRK53_RS13890	0.71	-1.8
3,061,342	-		LRK53_RS13890	0.71	-0.8
3,061,344	+		LRK53_RS13890	0.72	-1.7
3,061,344	+		LRK53_RS13890	0.72	-1.4
3,061,344	+		LRK53_RS13890	0.72	-0.3
3,061,344	+		LRK53_RS13890	0.72	-1.5
3,061,345	-		LRK53_RS13890	0.72	-0.9
3,061,345	-		LRK53_RS13890	0.72	-0.3
3,061,345	-		LRK53_RS13890	0.72	-0.8
3,061,345	-		LRK53_RS13890	0.72	-1.9
3,061,345	-		LRK53_RS13890	0.72	-0.9
3,061,345	-		LRK53_RS13890	0.72	-0.3
3,061,345	-		LRK53_RS13890	0.72	-1.8
3,061,360	-		LRK53_RS13890	0.75	-2.5
3,061,377	+		LRK53_RS13890	0.80	-0.7
3,061,377	+		LRK53_RS13890	0.80	+1.5
3,061,377	+		LRK53_RS13890	0.80	-0.8
3,061,377	+		LRK53_RS13890	0.80	-1.0
3,061,377	+		LRK53_RS13890	0.80	-1.9
3,061,377	+		LRK53_RS13890	0.80	-1.3
3,061,377	+		LRK53_RS13890	0.80	-0.1
3,061,377	+		LRK53_RS13890	0.80	+0.1
3,061,377	+		LRK53_RS13890	0.80	-1.2
3,061,377	+		LRK53_RS13890	0.80	-0.1
3,061,377	+		LRK53_RS13890	0.80	-1.5
3,061,377	+		LRK53_RS13890	0.80	-1.1
3,061,377	+		LRK53_RS13890	0.80	+1.0
3,061,377	+		LRK53_RS13890	0.80	+0.2
3,061,377	+		LRK53_RS13890	0.80	-2.2
3,061,377	+		LRK53_RS13890	0.80	-1.4
3,061,377	+		LRK53_RS13890	0.80	-0.3
3,061,377	+		LRK53_RS13890	0.80	-0.3
3,061,377	+		LRK53_RS13890	0.80	-0.9
3,061,377	+		LRK53_RS13890	0.80	-0.4
3,061,377	+		LRK53_RS13890	0.80	+3.1
3,061,377	+		LRK53_RS13890	0.80	-1.8
3,061,377	+		LRK53_RS13890	0.80	-1.4
3,061,377	+		LRK53_RS13890	0.80	-0.0
3,061,377	+		LRK53_RS13890	0.80	-1.5
3,061,377	+		LRK53_RS13890	0.80	+0.6
3,061,377	+		LRK53_RS13890	0.80	-1.2
3,061,377	+		LRK53_RS13890	0.80	-0.7
3,061,377	+		LRK53_RS13890	0.80	-0.3
3,061,377	+		LRK53_RS13890	0.80	-2.0
3,061,377	+		LRK53_RS13890	0.80	-0.9
3,061,377	+		LRK53_RS13890	0.80	-1.1
3,061,377	+		LRK53_RS13890	0.80	-1.1
3,061,377	+		LRK53_RS13890	0.80	-2.2
3,061,377	+		LRK53_RS13890	0.80	-0.6
3,061,377	+		LRK53_RS13890	0.80	-1.7
3,061,377	+		LRK53_RS13890	0.80	-0.0
3,061,377	+		LRK53_RS13890	0.80	-0.9
3,061,377	+		LRK53_RS13890	0.80	-3.0
3,061,377	+		LRK53_RS13890	0.80	+1.2
3,061,377	+		LRK53_RS13890	0.80	-1.8
3,061,377	+		LRK53_RS13890	0.80	-0.4
3,061,377	+		LRK53_RS13890	0.80	+0.4
3,061,377	+		LRK53_RS13890	0.80	-1.1
3,061,377	+		LRK53_RS13890	0.80	-0.2
3,061,377	+		LRK53_RS13890	0.80	-0.0
3,061,377	+		LRK53_RS13890	0.80	-1.6
3,061,377	+		LRK53_RS13890	0.80	-1.3
3,061,378	-		LRK53_RS13890	0.80	+0.3
3,061,378	-		LRK53_RS13890	0.80	-0.5
3,061,378	-		LRK53_RS13890	0.80	-1.2
3,061,378	-		LRK53_RS13890	0.80	-1.4
3,061,378	-		LRK53_RS13890	0.80	-1.5
3,061,378	-		LRK53_RS13890	0.80	-1.3
3,061,378	-		LRK53_RS13890	0.80	+1.0
3,061,378	-		LRK53_RS13890	0.80	-1.3
3,061,378	-		LRK53_RS13890	0.80	+0.1
3,061,378	-		LRK53_RS13890	0.80	-1.8
3,061,378	-		LRK53_RS13890	0.80	-1.2
3,061,378	-		LRK53_RS13890	0.80	-1.6
3,061,378	-		LRK53_RS13890	0.80	-2.0
3,061,378	-		LRK53_RS13890	0.80	-0.7
3,061,378	-		LRK53_RS13890	0.80	+1.1
3,061,378	-		LRK53_RS13890	0.80	+1.4
3,061,378	-		LRK53_RS13890	0.80	+1.1
3,061,378	-		LRK53_RS13890	0.80	-0.6
3,061,378	-		LRK53_RS13890	0.80	-2.1
3,061,378	-		LRK53_RS13890	0.80	-0.2
3,061,378	-		LRK53_RS13890	0.80	-2.0
3,061,378	-		LRK53_RS13890	0.80	-1.1
3,061,378	-		LRK53_RS13890	0.80	-0.7
3,061,378	-		LRK53_RS13890	0.80	+2.0
3,061,378	-		LRK53_RS13890	0.80	-0.9
3,061,378	-		LRK53_RS13890	0.80	+0.0
3,061,378	-		LRK53_RS13890	0.80	+0.6
3,061,378	-		LRK53_RS13890	0.80	+0.3
3,061,378	-		LRK53_RS13890	0.80	-0.5
3,061,378	-		LRK53_RS13890	0.80	-2.1
3,061,378	-		LRK53_RS13890	0.80	-0.2
3,061,378	-		LRK53_RS13890	0.80	-1.3
3,061,378	-		LRK53_RS13890	0.80	-0.4
3,061,378	-		LRK53_RS13890	0.80	-1.6
3,061,378	-		LRK53_RS13890	0.80	-1.2
3,061,378	-		LRK53_RS13890	0.80	+3.1
3,061,378	-		LRK53_RS13890	0.80	+0.2
3,061,378	-		LRK53_RS13890	0.80	+0.1
3,061,378	-		LRK53_RS13890	0.80	-2.6
3,061,378	-		LRK53_RS13890	0.80	-0.3
3,061,378	-		LRK53_RS13890	0.80	-0.0
3,061,378	-		LRK53_RS13890	0.80	-2.1
3,061,378	-		LRK53_RS13890	0.80	-1.3
3,061,378	-		LRK53_RS13890	0.80	-0.8
3,061,378	-		LRK53_RS13890	0.80	-1.0
3,061,378	-		LRK53_RS13890	0.80	-1.8
3,061,378	-		LRK53_RS13890	0.80	-0.3
3,061,378	-		LRK53_RS13890	0.80	-2.5
3,061,378	-		LRK53_RS13890	0.80	+0.4
3,061,378	-		LRK53_RS13890	0.80	-0.7
3,061,378	-		LRK53_RS13890	0.80	-0.7
3,061,378	-		LRK53_RS13890	0.80	-0.4
3,061,378	-		LRK53_RS13890	0.80	-1.4
3,061,378	-		LRK53_RS13890	0.80	+1.0
3,061,378	-		LRK53_RS13890	0.80	-1.6
3,061,378	-		LRK53_RS13890	0.80	-2.1
3,061,378	-		LRK53_RS13890	0.80	-0.0
3,061,384	-		LRK53_RS13890	0.81	-0.2
3,061,395	+		LRK53_RS13890	0.84	-1.3
3,061,395	+		LRK53_RS13890	0.84	-1.2
3,061,395	+		LRK53_RS13890	0.84	-0.3
3,061,395	+		LRK53_RS13890	0.84	-0.5
3,061,396	-		LRK53_RS13890	0.84	-0.6
3,061,396	-		LRK53_RS13890	0.84	-1.6
3,061,396	-		LRK53_RS13890	0.84	+2.1
3,061,398	+		LRK53_RS13890	0.85	-1.5
3,061,398	+		LRK53_RS13890	0.85	-0.9
3,061,398	+		LRK53_RS13890	0.85	-0.3
3,061,398	+		LRK53_RS13890	0.85	+0.5
3,061,399	-		LRK53_RS13890	0.85	-2.0
3,061,399	-		LRK53_RS13890	0.85	-0.2
3,061,399	-		LRK53_RS13890	0.85	-1.6
3,061,399	-		LRK53_RS13890	0.85	+0.0
3,061,399	-		LRK53_RS13890	0.85	-2.2
3,061,399	-		LRK53_RS13890	0.85	-1.0
3,061,399	-		LRK53_RS13890	0.85	-1.7
3,061,399	-		LRK53_RS13890	0.85	-0.7
3,061,399	-		LRK53_RS13890	0.85	-0.6
3,061,493	+				-2.1
3,061,562	+				-2.1
3,061,562	+				-0.0
3,061,562	+				-1.7
3,061,562	+				-1.7
3,061,562	+				+0.5
3,061,563	-				+0.7
3,061,563	-				-0.9
3,061,563	-				-1.3
3,061,563	-				-1.4
3,061,563	-				-1.1
3,061,563	-				-1.7
3,061,826	+		LRK53_RS13895	0.37	-2.8
3,062,157	+				-0.2
3,062,157	+				-1.2
3,062,157	+				+1.1
3,062,157	+				+0.4
3,062,157	+				-1.8
3,062,158	-				-2.2
3,062,158	-				+1.0
3,062,158	-				+1.1
3,062,158	-				-1.3
3,062,158	-				+0.0
3,062,202	+				-0.5
3,062,202	+				-1.1
3,062,202	+				-1.8
3,062,202	+				-1.1
3,062,202	+				-1.2
3,062,202	+				-1.0
3,062,203	-				-1.5
3,062,203	-				-0.7
3,062,203	-				-1.7
3,062,203	-				-2.2
3,062,203	-				-0.9
3,062,234	+				-1.3
3,062,235	-				-0.0
3,062,235	-				-1.0
3,062,235	-				-1.0
3,062,235	-				-1.5
3,062,235	-				-0.7
3,062,236	+				-2.8
3,062,236	+				-3.4
3,062,236	+				-0.6
3,062,236	+				-1.1
3,062,236	+				+1.1
3,062,236	+				-1.3
3,062,236	+				-1.1
3,062,236	+				-0.3
3,062,236	+				-0.0
3,062,236	+				-1.2
3,062,236	+				-0.2
3,062,236	+				-0.8
3,062,236	+				-0.1
3,062,236	+				+0.7
3,062,236	+				-0.4
3,062,236	+				+0.0
3,062,236	+				-0.8
3,062,236	+				-1.7
3,062,236	+				-1.1
3,062,236	+				-0.9
3,062,236	+				-0.3
3,062,236	+				-0.7
3,062,236	+				-0.0
3,062,236	+				+1.5
3,062,236	+				-0.5
3,062,236	+				+0.3
3,062,236	+				-0.5
3,062,236	+				+0.2
3,062,236	+				-1.2
3,062,236	+				-2.1
3,062,236	+				-0.5
3,062,236	+				+0.1
3,062,236	+				-1.6
3,062,236	+				-1.0
3,062,236	+				-1.1
3,062,236	+				-0.0
3,062,236	+				-0.5
3,062,236	+				-1.3
3,062,236	+				-1.9
3,062,236	+				-0.7
3,062,236	+				-1.1
3,062,236	+				-1.5
3,062,236	+				-0.3
3,062,236	+				+0.3
3,062,236	+				-0.8
3,062,236	+				-1.0
3,062,236	+				+0.3
3,062,237	-				-2.4
3,062,237	-				-0.9
3,062,237	-				+2.4
3,062,237	-				-1.1
3,062,237	-				-0.2
3,062,237	-				+0.3
3,062,237	-				-1.9
3,062,237	-				+1.8
3,062,237	-				-0.9
3,062,237	-				+1.5
3,062,237	-				-1.2
3,062,237	-				+1.2
3,062,237	-				-1.3
3,062,237	-				-2.4
3,062,237	-				+0.1
3,062,237	-				-1.3
3,062,237	-				+0.5
3,062,237	-				-2.1
3,062,237	-				-0.9
3,062,237	-				-0.4
3,062,237	-				+0.1
3,062,237	-				-1.2
3,062,237	-				-0.2
3,062,237	-				-0.2
3,062,237	-				-0.2
3,062,237	-				-0.2
3,062,237	-				+2.1
3,062,237	-				-0.0
3,062,237	-				-0.8
3,062,237	-				+1.0
3,062,237	-				-0.7
3,062,237	-				-2.5
3,062,249	+				-0.3
3,062,249	+				-0.5
3,062,249	+				-3.0
3,062,250	-				-0.9
3,062,250	-				+0.1
3,062,250	-				-2.1
3,062,250	-				-0.7
3,062,250	-				-0.2
3,062,276	+				-1.3
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3,062,381	-		LRK53_RS13900	0.14	-1.4
3,062,381	-		LRK53_RS13900	0.14	-0.7
3,062,381	-		LRK53_RS13900	0.14	-0.6
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3,062,458	+		LRK53_RS13900	0.26	-1.4
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3,062,458	+		LRK53_RS13900	0.26	+0.7
3,062,458	+		LRK53_RS13900	0.26	+0.3
3,062,458	+		LRK53_RS13900	0.26	+0.1
3,062,458	+		LRK53_RS13900	0.26	-1.9
3,062,458	+		LRK53_RS13900	0.26	+2.1
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3,062,459	-		LRK53_RS13900	0.26	-1.9
3,062,459	-		LRK53_RS13900	0.26	-0.7
3,062,459	-		LRK53_RS13900	0.26	-0.6
3,062,471	-		LRK53_RS13900	0.28	-0.3
3,062,471	-		LRK53_RS13900	0.28	-0.1
3,062,581	+		LRK53_RS13900	0.46	-1.7
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3,062,608	+		LRK53_RS13900	0.51	-1.7
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3,062,645	-		LRK53_RS13900	0.57	-1.7
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3,062,768	-		LRK53_RS13900	0.77	-1.7
3,062,768	-		LRK53_RS13900	0.77	-0.8
3,062,785	+		LRK53_RS13900	0.80	+0.3
3,062,785	+		LRK53_RS13900	0.80	+1.9
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3,062,785	+		LRK53_RS13900	0.80	+0.3
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3,062,786	-		LRK53_RS13900	0.80	-1.7
3,062,786	-		LRK53_RS13900	0.80	-2.1
3,062,978	+				-0.7
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3,063,000	-				-2.8
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3,063,264	+		LRK53_RS13905	0.20	-0.6
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3,063,419	-		LRK53_RS13905	0.38	+0.4
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3,063,706	-		LRK53_RS13905	0.71	-2.9
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3,063,793	-		LRK53_RS13905	0.81	+1.0
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3,063,793	-		LRK53_RS13905	0.81	-1.1
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3,063,793	-		LRK53_RS13905	0.81	-1.5
3,063,793	-		LRK53_RS13905	0.81	-0.8
3,063,793	-		LRK53_RS13905	0.81	+1.1
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3,063,794	+		LRK53_RS13905	0.81	+0.3
3,063,795	-		LRK53_RS13905	0.81	+1.1
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3,063,834	+		LRK53_RS13905	0.85	-1.1
3,063,834	+		LRK53_RS13905	0.85	-1.8
3,063,835	-		LRK53_RS13905	0.85	-1.5