Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS08730

Experiment: planktonic; Day4; SGW;

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	planktonic; Day4; SGW;
1,963,219	-		LRK53_RS08725	0.56	-0.5
1,963,219	-		LRK53_RS08725	0.56	-0.8
1,963,219	-		LRK53_RS08725	0.56	-0.4
1,963,257	+		LRK53_RS08725	0.58	-3.3
1,963,258	-		LRK53_RS08725	0.58	-0.2
1,963,356	+		LRK53_RS08725	0.62	-1.6
1,963,357	-		LRK53_RS08725	0.63	-2.2
1,963,357	-		LRK53_RS08725	0.63	-0.9
1,963,374	+		LRK53_RS08725	0.63	-2.1
1,963,374	+		LRK53_RS08725	0.63	+0.4
1,963,374	+		LRK53_RS08725	0.63	-1.1
1,963,374	+		LRK53_RS08725	0.63	-1.5
1,963,374	+		LRK53_RS08725	0.63	-1.3
1,963,374	+		LRK53_RS08725	0.63	+0.6
1,963,374	+		LRK53_RS08725	0.63	-1.7
1,963,374	+		LRK53_RS08725	0.63	-1.2
1,963,375	-		LRK53_RS08725	0.63	-1.4
1,963,375	-		LRK53_RS08725	0.63	-0.8
1,963,375	-		LRK53_RS08725	0.63	-0.8
1,963,375	-		LRK53_RS08725	0.63	-2.5
1,963,375	-		LRK53_RS08725	0.63	-0.3
1,963,375	-		LRK53_RS08725	0.63	-0.2
1,963,375	-		LRK53_RS08725	0.63	-1.2
1,963,439	+		LRK53_RS08725	0.66	-1.9
1,963,440	-		LRK53_RS08725	0.66	-1.2
1,963,482	+		LRK53_RS08725	0.68	-0.8
1,963,482	+		LRK53_RS08725	0.68	-1.6
1,963,483	-		LRK53_RS08725	0.68	-1.7
1,963,483	-		LRK53_RS08725	0.68	-2.0
1,963,483	-		LRK53_RS08725	0.68	+0.1
1,963,503	+		LRK53_RS08725	0.69	-2.9
1,963,503	+		LRK53_RS08725	0.69	-0.5
1,963,503	+		LRK53_RS08725	0.69	-0.2
1,963,503	+		LRK53_RS08725	0.69	-2.0
1,963,503	+		LRK53_RS08725	0.69	-3.5
1,963,503	+		LRK53_RS08725	0.69	-1.2
1,963,503	+		LRK53_RS08725	0.69	-0.6
1,963,504	-		LRK53_RS08725	0.69	+0.2
1,963,504	-		LRK53_RS08725	0.69	+1.5
1,963,504	-		LRK53_RS08725	0.69	-1.0
1,963,504	-		LRK53_RS08725	0.69	-1.7
1,963,504	-		LRK53_RS08725	0.69	+0.5
1,963,504	-		LRK53_RS08725	0.69	-2.6
1,963,504	-		LRK53_RS08725	0.69	+0.8
1,963,504	-		LRK53_RS08725	0.69	+0.9
1,963,504	-		LRK53_RS08725	0.69	-0.5
1,963,504	-		LRK53_RS08725	0.69	-2.5
1,963,554	+		LRK53_RS08725	0.71	-0.3
1,963,554	+		LRK53_RS08725	0.71	-2.4
1,963,554	+		LRK53_RS08725	0.71	-0.1
1,963,554	+		LRK53_RS08725	0.71	-1.0
1,963,554	+		LRK53_RS08725	0.71	-1.1
1,963,555	-		LRK53_RS08725	0.71	-1.6
1,963,555	-		LRK53_RS08725	0.71	-1.4
1,963,555	-		LRK53_RS08725	0.71	-1.8
1,963,555	-		LRK53_RS08725	0.71	-1.5
1,963,555	-		LRK53_RS08725	0.71	+0.6
1,963,707	+		LRK53_RS08725	0.78	-0.1
1,963,749	-		LRK53_RS08725	0.80	-0.1
1,963,755	+		LRK53_RS08725	0.80	-0.6
1,963,755	+		LRK53_RS08725	0.80	+0.1
1,963,755	+		LRK53_RS08725	0.80	-1.2
1,963,755	+		LRK53_RS08725	0.80	-0.6
1,963,755	+		LRK53_RS08725	0.80	-1.6
1,963,755	+		LRK53_RS08725	0.80	-1.5
1,963,755	+		LRK53_RS08725	0.80	-1.8
1,963,755	+		LRK53_RS08725	0.80	-1.1
1,963,755	+		LRK53_RS08725	0.80	-1.0
1,963,756	-		LRK53_RS08725	0.80	-1.0
1,964,045	+				-1.5
1,964,045	+				-1.4
1,964,046	-				+0.1
1,964,046	-				-0.9
1,964,046	-				-0.4
1,964,046	-				-1.6
1,964,056	+				+2.1
1,964,056	+				-0.6
1,964,056	+				-1.2
1,964,057	-				-1.7
1,964,057	-				+1.4
1,964,057	-				-0.6
1,964,057	-				-1.1
1,964,057	-				+0.0
1,964,057	-				-1.7
1,964,057	-				-1.0
1,964,108	-				-1.6
1,964,186	+				+0.5
1,964,186	+				-1.8
1,964,186	+				-1.1
1,964,187	-				-1.9
1,964,187	-				+0.9
1,964,187	-				-2.1
1,964,187	-				-0.9
1,964,218	+				-1.1
1,964,218	+				-0.6
1,964,219	-				-1.6
1,964,219	-				-0.2
1,964,219	-				+0.3
1,964,219	-				-0.9
1,964,313	-		LRK53_RS08730	0.37	-0.1
1,964,313	-		LRK53_RS08730	0.37	+0.2
1,964,313	-		LRK53_RS08730	0.37	+0.6
1,964,313	-		LRK53_RS08730	0.37	-1.4
1,964,342	-		LRK53_RS08730	0.45	-1.1
1,964,618	+				-1.3
1,964,618	+				+0.5
1,964,619	-				-2.3
1,964,619	-				-1.1
1,964,619	-				-0.5
1,964,681	+				-0.1
1,964,682	-				-0.4
1,964,729	+				-0.1
1,964,811	+				-0.9
1,964,811	+				-1.2
1,964,811	+				-2.3
1,964,811	+				-0.3
1,964,812	-				+0.3
1,964,812	-				-0.2
1,964,812	-				-2.3
1,964,812	-				-1.5
1,964,812	-				-1.2
1,964,963	+		LRK53_RS08735	0.14	-0.4
1,964,963	+		LRK53_RS08735	0.14	-1.2
1,964,963	+		LRK53_RS08735	0.14	-1.7
1,964,963	+		LRK53_RS08735	0.14	-0.5
1,964,963	+		LRK53_RS08735	0.14	-3.7
1,964,963	+		LRK53_RS08735	0.14	-2.6
1,964,963	+		LRK53_RS08735	0.14	-0.2
1,964,964	-		LRK53_RS08735	0.14	-0.5
1,964,964	-		LRK53_RS08735	0.14	+0.6
1,964,964	-		LRK53_RS08735	0.14	-1.7
1,965,035	+		LRK53_RS08735	0.20	-2.3
1,965,035	+		LRK53_RS08735	0.20	-2.0
1,965,035	+		LRK53_RS08735	0.20	-0.1
1,965,036	-		LRK53_RS08735	0.20	-1.3
1,965,036	-		LRK53_RS08735	0.20	-0.8
1,965,036	-		LRK53_RS08735	0.20	-0.5
1,965,087	+		LRK53_RS08735	0.25	-2.4
1,965,087	+		LRK53_RS08735	0.25	-0.9
1,965,087	+		LRK53_RS08735	0.25	+0.8
1,965,088	-		LRK53_RS08735	0.25	-0.6
1,965,088	-		LRK53_RS08735	0.25	-0.4
1,965,088	-		LRK53_RS08735	0.25	-0.5
1,965,088	-		LRK53_RS08735	0.25	-0.7
1,965,088	-		LRK53_RS08735	0.25	-0.2
1,965,088	-		LRK53_RS08735	0.25	-2.2
1,965,150	+		LRK53_RS08735	0.30	-1.5
1,965,150	+		LRK53_RS08735	0.30	-0.6
1,965,150	+		LRK53_RS08735	0.30	-1.4
1,965,150	+		LRK53_RS08735	0.30	-0.6
1,965,151	-		LRK53_RS08735	0.30	-1.1
1,965,151	-		LRK53_RS08735	0.30	-0.1
1,965,151	-		LRK53_RS08735	0.30	-0.7
1,965,151	-		LRK53_RS08735	0.30	-2.2
1,965,151	-		LRK53_RS08735	0.30	+0.9
1,965,151	-		LRK53_RS08735	0.30	-0.1
1,965,151	-		LRK53_RS08735	0.30	-2.1
1,965,151	-		LRK53_RS08735	0.30	-1.3
1,965,151	-		LRK53_RS08735	0.30	-0.8
1,965,221	+		LRK53_RS08735	0.36	-0.5
1,965,221	+		LRK53_RS08735	0.36	+0.2
1,965,222	-		LRK53_RS08735	0.36	-1.3
1,965,373	+		LRK53_RS08735	0.49	+0.1
1,965,390	+		LRK53_RS08735	0.50	+1.4
1,965,391	-		LRK53_RS08735	0.50	+0.1