Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS08090

Experiment: planktonic; Day4; SGW;

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	planktonic; Day4; SGW;
1,814,629	+		LRK53_RS08085	0.25	-1.6
1,814,629	+		LRK53_RS08085	0.25	-1.7
1,814,630	-		LRK53_RS08085	0.25	-0.7
1,814,638	-		LRK53_RS08085	0.26	-2.5
1,814,736	-		LRK53_RS08085	0.33	-0.8
1,814,737	+		LRK53_RS08085	0.33	-0.5
1,814,737	+		LRK53_RS08085	0.33	-1.6
1,814,737	+		LRK53_RS08085	0.33	-0.0
1,814,737	+		LRK53_RS08085	0.33	+1.2
1,814,738	-		LRK53_RS08085	0.33	-0.6
1,814,738	-		LRK53_RS08085	0.33	-0.8
1,814,738	-		LRK53_RS08085	0.33	-2.1
1,814,738	-		LRK53_RS08085	0.33	-0.5
1,814,738	-		LRK53_RS08085	0.33	-0.0
1,814,738	-		LRK53_RS08085	0.33	-1.4
1,814,807	+		LRK53_RS08085	0.39	-3.1
1,814,807	+		LRK53_RS08085	0.39	+0.8
1,814,807	+		LRK53_RS08085	0.39	-1.5
1,814,808	-		LRK53_RS08085	0.39	-0.6
1,814,982	+		LRK53_RS08085	0.52	+0.3
1,814,982	+		LRK53_RS08085	0.52	-2.2
1,814,982	+		LRK53_RS08085	0.52	-0.7
1,814,982	+		LRK53_RS08085	0.52	-1.8
1,814,983	-		LRK53_RS08085	0.52	-0.0
1,814,983	-		LRK53_RS08085	0.52	-1.2
1,814,983	-		LRK53_RS08085	0.52	-1.5
1,814,983	-		LRK53_RS08085	0.52	-2.4
1,815,091	+		LRK53_RS08085	0.60	+1.1
1,815,091	+		LRK53_RS08085	0.60	-0.3
1,815,092	-		LRK53_RS08085	0.60	-0.2
1,815,092	-		LRK53_RS08085	0.60	-0.5
1,815,097	+		LRK53_RS08085	0.61	-0.3
1,815,097	+		LRK53_RS08085	0.61	-0.8
1,815,097	+		LRK53_RS08085	0.61	-2.2
1,815,098	-		LRK53_RS08085	0.61	-0.1
1,815,571	+				+1.0
1,815,571	+				-2.1
1,815,571	+				-1.6
1,815,571	+				-0.8
1,815,571	+				-1.3
1,815,572	-				-0.0
1,815,572	-				+0.3
1,815,572	-				+2.0
1,815,572	-				-0.5
1,815,659	+				+0.5
1,815,659	+				+2.0
1,815,659	+				-2.2
1,815,659	+				-1.0
1,815,660	-				+0.9
1,815,812	-				-0.8
1,815,812	-				+1.2
1,815,812	-				-0.9
1,815,865	+				-0.7
1,815,865	+				-1.6
1,815,866	-				-0.0
1,815,886	+				-2.7
1,815,886	+				-0.3
1,815,886	+				-0.6
1,815,886	+				+0.2
1,815,886	+				+0.9
1,815,886	+				-0.3
1,815,886	+				-0.9
1,815,886	+				+1.4
1,815,887	-				-1.7
1,815,887	-				-0.0
1,815,887	-				-0.8
1,815,887	-				-1.2
1,815,887	-				+2.0
1,815,887	-				+0.0
1,815,887	-				-1.2
1,815,887	-				-1.8
1,815,887	-				-1.0
1,815,887	-				-0.8
1,815,892	+				+0.4
1,815,892	+				-0.5
1,815,892	+				-2.0
1,815,892	+				-3.8
1,815,892	+				-1.0
1,815,892	+				-2.2
1,815,892	+				-1.3
1,815,892	+				+0.2
1,815,892	+				-0.8
1,815,893	-				-1.4
1,815,893	-				-1.0
1,815,893	-				-2.6
1,815,893	-				-0.6
1,815,893	-				-0.4
1,815,893	-				+0.6
1,815,893	-				-0.4
1,815,893	-				-2.3
1,815,893	-				+0.8
1,815,893	-				-1.6
1,815,893	-				-0.7
1,815,893	-				-1.8
1,815,893	-				-0.4
1,815,893	-				+0.5
1,815,893	-				+0.7
1,815,893	-				-0.8
1,815,893	-				-0.9
1,815,893	-				+1.0
1,815,922	+				-0.1
1,815,922	+				-2.4
1,815,922	+				+0.4
1,815,923	-				+0.7
1,815,923	-				-0.6
1,815,923	-				-1.8
1,815,949	+		LRK53_RS08090	0.11	-1.2
1,815,949	+		LRK53_RS08090	0.11	-0.8
1,815,949	+		LRK53_RS08090	0.11	-2.0
1,815,950	-		LRK53_RS08090	0.11	-1.0
1,815,950	-		LRK53_RS08090	0.11	-0.6
1,815,950	-		LRK53_RS08090	0.11	-0.8
1,816,030	+		LRK53_RS08090	0.13	-1.5
1,816,036	+		LRK53_RS08090	0.13	-0.6
1,816,036	+		LRK53_RS08090	0.13	+1.1
1,816,037	-		LRK53_RS08090	0.14	-0.6
1,816,037	-		LRK53_RS08090	0.14	-2.2
1,816,037	-		LRK53_RS08090	0.14	-0.0
1,816,037	-		LRK53_RS08090	0.14	-0.6
1,816,037	-		LRK53_RS08090	0.14	-2.0
1,816,037	-		LRK53_RS08090	0.14	-0.4
1,816,585	+		LRK53_RS08090	0.31	-0.3
1,816,585	+		LRK53_RS08090	0.31	-2.4
1,816,585	+		LRK53_RS08090	0.31	-0.8
1,816,585	+		LRK53_RS08090	0.31	-0.6
1,816,585	+		LRK53_RS08090	0.31	-0.7
1,816,602	+		LRK53_RS08090	0.32	-0.9
1,816,603	-		LRK53_RS08090	0.32	-0.2
1,816,667	+		LRK53_RS08090	0.34	-0.5
1,816,667	+		LRK53_RS08090	0.34	-2.9
1,816,667	+		LRK53_RS08090	0.34	-0.3
1,816,667	+		LRK53_RS08090	0.34	+0.2
1,816,668	-		LRK53_RS08090	0.34	-1.3
1,816,668	-		LRK53_RS08090	0.34	-2.4
1,816,668	-		LRK53_RS08090	0.34	-2.6
1,816,668	-		LRK53_RS08090	0.34	-0.0
1,817,062	+		LRK53_RS08090	0.46	-0.2
1,817,119	+		LRK53_RS08090	0.48	-0.9
1,817,186	-		LRK53_RS08090	0.50	+0.2
1,817,326	+		LRK53_RS08090	0.55	-2.7
1,817,326	+		LRK53_RS08090	0.55	+0.9
1,817,326	+		LRK53_RS08090	0.55	+0.4
1,817,326	+		LRK53_RS08090	0.55	-1.7
1,817,326	+		LRK53_RS08090	0.55	-1.4
1,817,326	+		LRK53_RS08090	0.55	-2.0
1,817,326	+		LRK53_RS08090	0.55	-0.7
1,817,326	+		LRK53_RS08090	0.55	+0.0
1,817,326	+		LRK53_RS08090	0.55	-1.4
1,817,326	+		LRK53_RS08090	0.55	-0.8
1,817,326	+		LRK53_RS08090	0.55	-1.1
1,817,326	+		LRK53_RS08090	0.55	-0.9
1,817,326	+		LRK53_RS08090	0.55	-1.0
1,817,326	+		LRK53_RS08090	0.55	-0.7
1,817,326	+		LRK53_RS08090	0.55	-0.5
1,817,326	+		LRK53_RS08090	0.55	+0.2
1,817,326	+		LRK53_RS08090	0.55	-0.0
1,817,326	+		LRK53_RS08090	0.55	-0.4
1,817,326	+		LRK53_RS08090	0.55	-0.4
1,817,326	+		LRK53_RS08090	0.55	-1.2
1,817,326	+		LRK53_RS08090	0.55	-0.7
1,817,326	+		LRK53_RS08090	0.55	-0.9
1,817,326	+		LRK53_RS08090	0.55	-0.2
1,817,326	+		LRK53_RS08090	0.55	+0.4
1,817,326	+		LRK53_RS08090	0.55	+0.5
1,817,326	+		LRK53_RS08090	0.55	+1.6
1,817,326	+		LRK53_RS08090	0.55	-4.5
1,817,326	+		LRK53_RS08090	0.55	-1.4
1,817,326	+		LRK53_RS08090	0.55	-1.6
1,817,327	-		LRK53_RS08090	0.55	-0.4
1,817,327	-		LRK53_RS08090	0.55	+1.0
1,817,327	-		LRK53_RS08090	0.55	+0.0
1,817,327	-		LRK53_RS08090	0.55	+0.8
1,817,327	-		LRK53_RS08090	0.55	-2.6
1,817,327	-		LRK53_RS08090	0.55	-0.0
1,817,327	-		LRK53_RS08090	0.55	-0.5
1,817,327	-		LRK53_RS08090	0.55	-1.8
1,817,327	-		LRK53_RS08090	0.55	-0.3
1,817,327	-		LRK53_RS08090	0.55	+2.0
1,817,327	-		LRK53_RS08090	0.55	-1.2
1,817,327	-		LRK53_RS08090	0.55	-0.8
1,817,327	-		LRK53_RS08090	0.55	-0.4
1,817,327	-		LRK53_RS08090	0.55	+0.2
1,817,327	-		LRK53_RS08090	0.55	-0.8
1,817,327	-		LRK53_RS08090	0.55	-1.1
1,817,327	-		LRK53_RS08090	0.55	-2.2
1,817,327	-		LRK53_RS08090	0.55	-0.5
1,817,327	-		LRK53_RS08090	0.55	-0.0
1,817,327	-		LRK53_RS08090	0.55	-0.2
1,817,327	-		LRK53_RS08090	0.55	-0.2
1,817,327	-		LRK53_RS08090	0.55	-0.8
1,817,327	-		LRK53_RS08090	0.55	-0.7
1,817,327	-		LRK53_RS08090	0.55	-0.9
1,817,327	-		LRK53_RS08090	0.55	-2.9
1,817,570	+		LRK53_RS08090	0.62	-2.0
1,817,571	-		LRK53_RS08090	0.62	-2.5
1,817,576	+		LRK53_RS08090	0.63	+0.4
1,817,666	+		LRK53_RS08090	0.65	-1.6
1,817,666	+		LRK53_RS08090	0.65	+0.6
1,817,667	-		LRK53_RS08090	0.65	-2.4
1,817,667	-		LRK53_RS08090	0.65	-2.9
1,817,667	-		LRK53_RS08090	0.65	-1.2
1,817,667	-		LRK53_RS08090	0.65	-1.6
1,817,741	+		LRK53_RS08090	0.68	-0.8
1,817,741	+		LRK53_RS08090	0.68	-0.5
1,817,741	+		LRK53_RS08090	0.68	-0.0
1,817,741	+		LRK53_RS08090	0.68	-1.6
1,817,741	+		LRK53_RS08090	0.68	+0.1
1,817,742	-		LRK53_RS08090	0.68	-2.1
1,817,779	+		LRK53_RS08090	0.69	-3.4
1,817,779	+		LRK53_RS08090	0.69	-1.2
1,817,779	+		LRK53_RS08090	0.69	-1.1
1,817,779	+		LRK53_RS08090	0.69	+0.3
1,817,780	-		LRK53_RS08090	0.69	-1.7
1,817,780	-		LRK53_RS08090	0.69	-0.6
1,817,780	-		LRK53_RS08090	0.69	-0.3
1,817,780	-		LRK53_RS08090	0.69	+0.8
1,817,966	+		LRK53_RS08090	0.75	-1.8
1,817,966	+		LRK53_RS08090	0.75	-1.2
1,817,966	+		LRK53_RS08090	0.75	-1.1
1,817,966	+		LRK53_RS08090	0.75	-1.0
1,817,966	+		LRK53_RS08090	0.75	-1.3
1,817,967	-		LRK53_RS08090	0.75	-0.8
1,817,967	-		LRK53_RS08090	0.75	-0.2
1,817,967	-		LRK53_RS08090	0.75	-1.0
1,817,967	-		LRK53_RS08090	0.75	-1.3
1,817,967	-		LRK53_RS08090	0.75	-0.5
1,817,967	-		LRK53_RS08090	0.75	-3.0
1,817,967	-		LRK53_RS08090	0.75	-0.9
1,818,079	+		LRK53_RS08090	0.79	+0.0
1,818,079	+		LRK53_RS08090	0.79	-0.5
1,818,079	+		LRK53_RS08090	0.79	-1.3
1,818,079	+		LRK53_RS08090	0.79	-0.9
1,818,079	+		LRK53_RS08090	0.79	+0.4
1,818,079	+		LRK53_RS08090	0.79	-0.9
1,818,080	-		LRK53_RS08090	0.79	-1.9
1,818,080	-		LRK53_RS08090	0.79	-1.1
1,818,080	-		LRK53_RS08090	0.79	-1.6
1,818,080	-		LRK53_RS08090	0.79	-0.2
1,818,080	-		LRK53_RS08090	0.79	-1.7
1,818,080	-		LRK53_RS08090	0.79	-0.0
1,818,080	-		LRK53_RS08090	0.79	-0.2
1,818,080	-		LRK53_RS08090	0.79	-2.0
1,818,080	-		LRK53_RS08090	0.79	+0.5
1,818,080	-		LRK53_RS08090	0.79	-1.1
1,818,085	+		LRK53_RS08090	0.79	-0.7
1,818,086	-		LRK53_RS08090	0.79	+0.8
1,818,086	-		LRK53_RS08090	0.79	-0.0
1,818,203	-		LRK53_RS08090	0.83	-0.0
1,818,203	-		LRK53_RS08090	0.83	+0.4
1,818,275	-		LRK53_RS08090	0.85	-0.8
1,818,275	-		LRK53_RS08090	0.85	-1.3
1,818,275	-		LRK53_RS08090	0.85	-0.3
1,818,451	+				-2.0
1,818,451	+				-0.4
1,818,451	+				-1.8
1,818,451	+				+0.3
1,818,748	+				-0.5
1,818,748	+				+0.3
1,818,748	+				-0.6
1,818,748	+				+0.4
1,818,749	-				+0.2
1,818,749	-				-0.4
1,818,749	-				-0.1
1,818,749	-				-0.4
1,818,749	-				-0.0
1,818,838	+		LRK53_RS08095	0.14	-0.6
1,818,938	+		LRK53_RS08095	0.44	-0.1
1,818,939	-		LRK53_RS08095	0.44	+1.0
1,818,939	-		LRK53_RS08095	0.44	-0.5
1,818,939	-		LRK53_RS08095	0.44	-1.3
1,819,113	-				-1.7
1,819,128	+				-1.7
1,819,128	+				+0.1
1,819,128	+				-3.2
1,819,128	+				-0.8
1,819,128	+				-1.6
1,819,129	-				-0.8
1,819,129	-				-0.7
1,819,181	+				-2.9
1,819,181	+				+0.8
1,819,181	+				-0.6
1,819,182	-				+0.2
1,819,198	-				-0.8
1,819,241	+				+0.1
1,819,241	+				-1.3
1,819,241	+				-0.9
1,819,241	+				-1.7
1,819,241	+				+0.5
1,819,241	+				-0.6
1,819,242	-				+0.2
1,819,242	-				-0.8
1,819,242	-				-0.9
1,819,242	-				-2.4
1,819,242	-				-0.2
1,819,242	-				+0.4
1,819,246	+				+1.0
1,819,246	+				-1.6
1,819,246	+				-3.4
1,819,246	+				-2.2
1,819,246	+				+0.2
1,819,246	+				-2.3
1,819,246	+				-0.5
1,819,246	+				-2.5
1,819,247	-				-1.2
1,819,247	-				-1.5
1,819,247	-				-2.8
1,819,247	-				+0.6
1,819,247	-				-0.3
1,819,247	-				-1.4
1,819,247	-				-0.4
1,819,247	-				-1.0
1,819,307	+		LRK53_RS08100	0.24	-1.0
1,819,307	+		LRK53_RS08100	0.24	-0.6
1,819,307	+		LRK53_RS08100	0.24	-0.4
1,819,308	-		LRK53_RS08100	0.24	-0.4
1,819,308	-		LRK53_RS08100	0.24	-1.3
1,819,501	+				-1.8
1,819,502	-				-1.4
1,819,502	-				-1.5
1,819,541	+				-0.1
1,819,541	+				-0.5
1,819,541	+				-0.6
1,819,542	-				-1.9
1,819,542	-				-0.4
1,819,542	-				-1.8
1,819,542	-				-2.3
1,819,542	-				+1.2
1,819,542	-				-0.2
1,819,542	-				-0.9
1,819,542	-				+0.5