Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS04745

Experiment: planktonic; Day4; SGW;

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	planktonic; Day4; SGW;
1,107,142	+		LRK53_RS04740	0.61	+0.3
1,107,142	+		LRK53_RS04740	0.61	+0.4
1,107,143	-		LRK53_RS04740	0.61	-1.1
1,107,143	-		LRK53_RS04740	0.61	-2.2
1,107,153	+		LRK53_RS04740	0.62	-0.6
1,107,197	+		LRK53_RS04740	0.64	-1.6
1,107,197	+		LRK53_RS04740	0.64	-0.0
1,107,197	+		LRK53_RS04740	0.64	-2.2
1,107,197	+		LRK53_RS04740	0.64	-0.9
1,107,197	+		LRK53_RS04740	0.64	-0.6
1,107,197	+		LRK53_RS04740	0.64	-1.1
1,107,197	+		LRK53_RS04740	0.64	-1.4
1,107,197	+		LRK53_RS04740	0.64	-1.3
1,107,197	+		LRK53_RS04740	0.64	-0.5
1,107,197	+		LRK53_RS04740	0.64	-0.3
1,107,198	-		LRK53_RS04740	0.64	-1.5
1,107,198	-		LRK53_RS04740	0.64	-1.7
1,107,198	-		LRK53_RS04740	0.64	-1.0
1,107,201	+		LRK53_RS04740	0.64	-0.9
1,107,201	+		LRK53_RS04740	0.64	-0.8
1,107,201	+		LRK53_RS04740	0.64	+1.2
1,107,201	+		LRK53_RS04740	0.64	+0.1
1,107,201	+		LRK53_RS04740	0.64	-0.7
1,107,201	+		LRK53_RS04740	0.64	-0.2
1,107,202	-		LRK53_RS04740	0.64	-1.7
1,107,213	+		LRK53_RS04740	0.64	+1.4
1,107,220	+		LRK53_RS04740	0.65	-1.1
1,107,221	-		LRK53_RS04740	0.65	+0.7
1,107,221	-		LRK53_RS04740	0.65	-0.3
1,107,293	-		LRK53_RS04740	0.68	-2.1
1,107,327	-		LRK53_RS04740	0.70	-1.0
1,107,384	+		LRK53_RS04740	0.72	-1.9
1,107,384	+		LRK53_RS04740	0.72	-1.0
1,107,385	-		LRK53_RS04740	0.72	-0.5
1,107,385	-		LRK53_RS04740	0.72	+0.3
1,107,385	-		LRK53_RS04740	0.72	+0.1
1,107,385	-		LRK53_RS04740	0.72	-2.0
1,107,385	-		LRK53_RS04740	0.72	-2.8
1,107,385	-		LRK53_RS04740	0.72	-1.4
1,107,385	-		LRK53_RS04740	0.72	-1.0
1,107,392	+		LRK53_RS04740	0.73	-1.5
1,107,392	+		LRK53_RS04740	0.73	-2.0
1,107,392	+		LRK53_RS04740	0.73	+0.1
1,107,393	-		LRK53_RS04740	0.73	+0.7
1,107,393	-		LRK53_RS04740	0.73	+1.7
1,107,393	-		LRK53_RS04740	0.73	-1.2
1,107,393	-		LRK53_RS04740	0.73	-0.1
1,107,393	-		LRK53_RS04740	0.73	-2.8
1,107,414	+		LRK53_RS04740	0.74	-1.5
1,107,414	+		LRK53_RS04740	0.74	+0.7
1,107,414	+		LRK53_RS04740	0.74	+0.3
1,107,414	+		LRK53_RS04740	0.74	-1.5
1,107,414	+		LRK53_RS04740	0.74	-1.9
1,107,414	+		LRK53_RS04740	0.74	-0.1
1,107,414	+		LRK53_RS04740	0.74	-2.1
1,107,414	+		LRK53_RS04740	0.74	-0.4
1,107,414	+		LRK53_RS04740	0.74	-1.3
1,107,415	-		LRK53_RS04740	0.74	-1.7
1,107,415	-		LRK53_RS04740	0.74	-0.9
1,107,415	-		LRK53_RS04740	0.74	-2.1
1,107,415	-		LRK53_RS04740	0.74	-0.5
1,107,415	-		LRK53_RS04740	0.74	-0.3
1,107,415	-		LRK53_RS04740	0.74	+0.5
1,107,415	-		LRK53_RS04740	0.74	-0.0
1,107,415	-		LRK53_RS04740	0.74	-1.5
1,107,415	-		LRK53_RS04740	0.74	-1.7
1,107,415	-		LRK53_RS04740	0.74	-2.0
1,107,415	-		LRK53_RS04740	0.74	-1.5
1,107,415	-		LRK53_RS04740	0.74	-0.5
1,107,415	-		LRK53_RS04740	0.74	+0.5
1,107,415	-		LRK53_RS04740	0.74	-1.4
1,107,415	-		LRK53_RS04740	0.74	+1.5
1,107,415	-		LRK53_RS04740	0.74	-0.3
1,107,415	-		LRK53_RS04740	0.74	-1.9
1,107,415	-		LRK53_RS04740	0.74	-0.3
1,107,415	-		LRK53_RS04740	0.74	+0.9
1,107,466	+		LRK53_RS04740	0.76	-0.3
1,107,466	+		LRK53_RS04740	0.76	-1.1
1,107,466	+		LRK53_RS04740	0.76	-1.2
1,107,467	-		LRK53_RS04740	0.76	+0.9
1,107,467	-		LRK53_RS04740	0.76	-2.5
1,107,467	-		LRK53_RS04740	0.76	-2.4
1,107,480	+		LRK53_RS04740	0.77	-2.3
1,107,480	+		LRK53_RS04740	0.77	-1.3
1,107,480	+		LRK53_RS04740	0.77	-2.2
1,107,480	+		LRK53_RS04740	0.77	-0.9
1,107,480	+		LRK53_RS04740	0.77	+0.3
1,107,480	+		LRK53_RS04740	0.77	-1.1
1,107,481	-		LRK53_RS04740	0.77	-0.6
1,107,481	-		LRK53_RS04740	0.77	-0.3
1,107,481	-		LRK53_RS04740	0.77	-1.7
1,107,481	-		LRK53_RS04740	0.77	+0.4
1,107,481	-		LRK53_RS04740	0.77	-0.4
1,107,513	+		LRK53_RS04740	0.78	-0.4
1,107,514	-		LRK53_RS04740	0.78	-0.8
1,107,666	+		LRK53_RS04740	0.86	-0.5
1,107,666	+		LRK53_RS04740	0.86	-0.5
1,107,666	+		LRK53_RS04740	0.86	-1.0
1,107,666	+		LRK53_RS04740	0.86	+0.7
1,107,666	+		LRK53_RS04740	0.86	-3.6
1,107,666	+		LRK53_RS04740	0.86	+0.3
1,107,666	+		LRK53_RS04740	0.86	+1.4
1,107,666	+		LRK53_RS04740	0.86	-0.1
1,107,666	+		LRK53_RS04740	0.86	+0.2
1,107,666	+		LRK53_RS04740	0.86	+0.8
1,107,666	+		LRK53_RS04740	0.86	-1.6
1,107,666	+		LRK53_RS04740	0.86	-0.5
1,107,666	+		LRK53_RS04740	0.86	+0.3
1,107,666	+		LRK53_RS04740	0.86	+0.1
1,107,666	+		LRK53_RS04740	0.86	+0.1
1,107,666	+		LRK53_RS04740	0.86	-0.2
1,107,666	+		LRK53_RS04740	0.86	-0.0
1,107,666	+		LRK53_RS04740	0.86	-0.0
1,107,667	-		LRK53_RS04740	0.86	-0.5
1,107,667	-		LRK53_RS04740	0.86	-1.1
1,107,667	-		LRK53_RS04740	0.86	-0.7
1,107,667	-		LRK53_RS04740	0.86	-1.3
1,107,667	-		LRK53_RS04740	0.86	-0.1
1,107,667	-		LRK53_RS04740	0.86	+1.1
1,107,667	-		LRK53_RS04740	0.86	+1.7
1,107,750	+		LRK53_RS04740	0.89	+0.1
1,107,750	+		LRK53_RS04740	0.89	-1.9
1,107,750	+		LRK53_RS04740	0.89	-1.7
1,107,751	-		LRK53_RS04740	0.89	+0.5
1,107,989	+				+0.2
1,107,989	+				-1.1
1,107,989	+				-1.6
1,107,990	-				-1.9
1,107,990	-				-1.9
1,107,990	-				-1.4
1,107,990	-				-1.5
1,108,014	+				-1.1
1,108,014	+				-1.6
1,108,014	+				-1.3
1,108,014	+				-0.5
1,108,014	+				-1.0
1,108,014	+				+0.3
1,108,014	+				-0.7
1,108,014	+				-2.0
1,108,014	+				-0.1
1,108,015	-				-1.8
1,108,015	-				-1.5
1,108,015	-				+0.2
1,108,026	+				-1.0
1,108,026	+				-0.8
1,108,026	+				-1.3
1,108,026	+				-0.5
1,108,026	+				-1.6
1,108,026	+				-0.1
1,108,027	-				-0.8
1,108,027	-				-0.0
1,108,027	-				-2.9
1,108,027	-				-0.5
1,108,027	-				+0.1
1,108,027	-				-1.4
1,108,027	-				-1.5
1,108,027	-				-2.0
1,108,027	-				-3.0
1,108,027	-				-0.7
1,108,027	-				-3.3
1,108,038	+				-1.7
1,108,054	+				-0.8
1,108,055	-				-2.4
1,108,055	-				-1.7
1,108,055	-				-0.7
1,108,055	-				-1.8
1,108,055	-				-0.8
1,108,055	-				-1.3
1,108,128	+		LRK53_RS04745	0.13	-1.6
1,108,129	-		LRK53_RS04745	0.14	-2.6
1,108,129	-		LRK53_RS04745	0.14	-1.2
1,108,196	+		LRK53_RS04745	0.28	+1.5
1,108,196	+		LRK53_RS04745	0.28	+0.9
1,108,196	+		LRK53_RS04745	0.28	-1.7
1,108,196	+		LRK53_RS04745	0.28	-2.3
1,108,239	+		LRK53_RS04745	0.38	-0.8
1,108,240	-		LRK53_RS04745	0.38	-0.5
1,108,359	+		LRK53_RS04745	0.65	-1.4
1,108,360	-		LRK53_RS04745	0.65	+0.2
1,108,386	+		LRK53_RS04745	0.71	-0.3
1,108,386	+		LRK53_RS04745	0.71	-1.0
1,108,386	+		LRK53_RS04745	0.71	-2.0
1,108,386	+		LRK53_RS04745	0.71	+0.4
1,108,386	+		LRK53_RS04745	0.71	-0.4
1,108,386	+		LRK53_RS04745	0.71	-0.6
1,108,386	+		LRK53_RS04745	0.71	-0.9
1,108,386	+		LRK53_RS04745	0.71	-0.6
1,108,386	+		LRK53_RS04745	0.71	-1.7
1,108,386	+		LRK53_RS04745	0.71	+0.4
1,108,386	+		LRK53_RS04745	0.71	-2.3
1,108,386	+		LRK53_RS04745	0.71	-1.2
1,108,386	+		LRK53_RS04745	0.71	-2.9
1,108,386	+		LRK53_RS04745	0.71	-0.1
1,108,386	+		LRK53_RS04745	0.71	-1.9
1,108,386	+		LRK53_RS04745	0.71	+0.9
1,108,386	+		LRK53_RS04745	0.71	-0.6
1,108,386	+		LRK53_RS04745	0.71	-3.1
1,108,386	+		LRK53_RS04745	0.71	-0.6
1,108,386	+		LRK53_RS04745	0.71	+2.1
1,108,386	+		LRK53_RS04745	0.71	-0.5
1,108,386	+		LRK53_RS04745	0.71	-0.1
1,108,386	+		LRK53_RS04745	0.71	-1.1
1,108,386	+		LRK53_RS04745	0.71	-0.1
1,108,386	+		LRK53_RS04745	0.71	-2.3
1,108,386	+		LRK53_RS04745	0.71	-1.9
1,108,386	+		LRK53_RS04745	0.71	-1.4
1,108,386	+		LRK53_RS04745	0.71	-0.9
1,108,387	-		LRK53_RS04745	0.71	-1.1
1,108,387	-		LRK53_RS04745	0.71	+1.2
1,108,387	-		LRK53_RS04745	0.71	-2.2
1,108,387	-		LRK53_RS04745	0.71	-3.9
1,108,387	-		LRK53_RS04745	0.71	-2.3
1,108,387	-		LRK53_RS04745	0.71	-1.5
1,108,387	-		LRK53_RS04745	0.71	-2.5
1,108,387	-		LRK53_RS04745	0.71	+1.3
1,108,387	-		LRK53_RS04745	0.71	-0.2
1,108,387	-		LRK53_RS04745	0.71	-1.1
1,108,387	-		LRK53_RS04745	0.71	-1.3
1,108,387	-		LRK53_RS04745	0.71	-1.1
1,108,387	-		LRK53_RS04745	0.71	-0.7
1,108,387	-		LRK53_RS04745	0.71	+0.2
1,108,387	-		LRK53_RS04745	0.71	-1.3
1,108,387	-		LRK53_RS04745	0.71	-1.3
1,108,387	-		LRK53_RS04745	0.71	+0.8
1,108,387	-		LRK53_RS04745	0.71	-1.3
1,108,387	-		LRK53_RS04745	0.71	-0.9
1,108,387	-		LRK53_RS04745	0.71	-1.3
1,108,387	-		LRK53_RS04745	0.71	-1.8
1,108,387	-		LRK53_RS04745	0.71	-0.4
1,108,387	-		LRK53_RS04745	0.71	-0.6
1,108,391	+		LRK53_RS04745	0.72	+0.5
1,108,391	+		LRK53_RS04745	0.72	-1.5
1,108,391	+		LRK53_RS04745	0.72	-1.7
1,108,391	+		LRK53_RS04745	0.72	-1.3
1,108,391	+		LRK53_RS04745	0.72	-0.7
1,108,391	+		LRK53_RS04745	0.72	+0.5
1,108,391	+		LRK53_RS04745	0.72	-0.4
1,108,391	+		LRK53_RS04745	0.72	-3.0
1,108,391	+		LRK53_RS04745	0.72	-2.1
1,108,392	-		LRK53_RS04745	0.72	-1.1
1,108,392	-		LRK53_RS04745	0.72	-0.9
1,108,392	-		LRK53_RS04745	0.72	-0.4
1,108,392	-		LRK53_RS04745	0.72	+0.3
1,108,392	-		LRK53_RS04745	0.72	-1.3
1,108,420	+		LRK53_RS04745	0.78	-0.5
1,108,420	+		LRK53_RS04745	0.78	-1.2
1,108,421	-		LRK53_RS04745	0.78	-1.3
1,108,421	-		LRK53_RS04745	0.78	-1.3
1,108,421	-		LRK53_RS04745	0.78	-0.8
1,108,421	-		LRK53_RS04745	0.78	+0.8
1,108,421	-		LRK53_RS04745	0.78	+0.3
1,108,534	-				-2.1
1,108,549	+				-1.0
1,108,549	+				-0.6
1,108,549	+				-0.7
1,108,550	-				-2.0
1,108,550	-				-0.2
1,108,550	-				-2.6
1,108,550	-				-0.5
1,108,550	-				-0.6
1,108,550	-				-0.7
1,108,550	-				-0.2
1,108,577	-				-0.0
1,108,617	+				-3.6
1,108,617	+				-2.0
1,108,617	+				+0.5
1,108,617	+				-1.5
1,108,618	-				-1.2
1,108,618	-				+0.2
1,108,618	-				-1.5
1,108,618	-				-1.4
1,108,672	+				-0.8
1,108,673	-				-0.3
1,108,673	-				-0.3
1,108,673	-				-0.5
1,108,673	-				+0.1
1,109,011	+		LRK53_RS04750	0.28	+0.4
1,109,012	-		LRK53_RS04750	0.28	-1.0
1,109,012	-		LRK53_RS04750	0.28	-0.6
1,109,012	-		LRK53_RS04750	0.28	+0.3
1,109,044	+		LRK53_RS04750	0.30	+0.8
1,109,089	+		LRK53_RS04750	0.34	-1.5
1,109,089	+		LRK53_RS04750	0.34	-1.1
1,109,089	+		LRK53_RS04750	0.34	-1.9
1,109,090	-		LRK53_RS04750	0.34	+0.4
1,109,090	-		LRK53_RS04750	0.34	-0.6
1,109,090	-		LRK53_RS04750	0.34	-0.5
1,109,090	-		LRK53_RS04750	0.34	-0.8
1,109,092	+		LRK53_RS04750	0.34	-0.4
1,109,093	-		LRK53_RS04750	0.34	-0.3
1,109,093	-		LRK53_RS04750	0.34	+1.2
1,109,115	-		LRK53_RS04750	0.36	+0.3