Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS04725

Experiment: planktonic; Day4; SGW;

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	planktonic; Day4; SGW;
1,098,273	+				-1.0
1,098,273	+				-0.1
1,098,273	+				-2.5
1,098,274	-				-1.2
1,098,274	-				-1.7
1,098,275	+				-0.0
1,098,276	-				-1.0
1,098,276	-				-0.5
1,098,276	-				+1.7
1,098,306	+				-0.2
1,098,306	+				-1.6
1,098,307	-				-0.7
1,098,315	+				-2.0
1,098,315	+				-0.1
1,098,315	+				+1.6
1,098,315	+				+0.3
1,098,315	+				-0.1
1,098,315	+				-0.8
1,098,315	+				-2.0
1,098,315	+				-0.6
1,098,315	+				-1.0
1,098,315	+				-0.3
1,098,316	-				-0.8
1,098,317	+				+0.2
1,098,317	+				-1.4
1,098,317	+				-1.4
1,098,318	-				-1.5
1,098,318	-				-1.6
1,098,318	-				-0.5
1,098,318	-				-0.3
1,098,318	-				-1.3
1,098,321	-				-1.7
1,098,321	-				+0.1
1,098,336	+				-1.2
1,098,336	+				-0.1
1,098,337	-				-0.9
1,098,337	-				-1.1
1,098,337	-				-1.2
1,098,337	-				-0.1
1,098,337	-				-0.1
1,098,337	-				-1.3
1,098,337	-				-1.8
1,098,337	-				-3.1
1,098,337	-				-2.0
1,098,338	+				+0.3
1,098,338	+				+0.3
1,098,338	+				-2.1
1,098,338	+				-0.1
1,098,338	+				-0.1
1,098,338	+				-2.0
1,098,338	+				-0.7
1,098,338	+				-0.4
1,098,338	+				+0.0
1,098,338	+				-1.0
1,098,338	+				-0.9
1,098,338	+				+0.8
1,098,338	+				-0.9
1,098,339	-				-0.3
1,098,339	-				-0.2
1,098,339	-				-1.0
1,098,339	-				-2.4
1,098,339	-				-1.4
1,098,339	-				-0.6
1,098,339	-				-1.6
1,098,339	-				-2.9
1,098,339	-				-0.1
1,098,339	-				+0.1
1,098,346	-				-0.7
1,098,356	+				-1.2
1,098,356	+				-1.0
1,098,357	-				+0.5
1,098,358	+				-1.8
1,098,358	+				-1.0
1,098,358	+				-0.8
1,098,358	+				-1.2
1,098,358	+				-0.6
1,098,358	+				-1.8
1,098,358	+				-0.1
1,098,358	+				+1.1
1,098,358	+				-0.9
1,098,358	+				-0.4
1,098,359	-				-0.5
1,098,359	-				-1.8
1,098,359	-				-0.9
1,098,359	-				-2.6
1,098,359	-				-0.6
1,098,359	-				-0.4
1,098,359	-				-2.1
1,098,365	+				-1.1
1,098,366	-				+0.4
1,098,379	+				-1.7
1,098,379	+				-2.1
1,098,380	-				-0.6
1,098,380	-				+0.8
1,098,454	+		LRK53_RS04720	0.12	-1.4
1,098,454	+		LRK53_RS04720	0.12	-0.5
1,098,455	-		LRK53_RS04720	0.12	+2.1
1,098,455	-		LRK53_RS04720	0.12	-0.1
1,098,455	-		LRK53_RS04720	0.12	-0.4
1,098,455	-		LRK53_RS04720	0.12	-0.1
1,098,661	+		LRK53_RS04720	0.47	-0.7
1,098,661	+		LRK53_RS04720	0.47	-0.1
1,098,661	+		LRK53_RS04720	0.47	-1.5
1,098,662	-		LRK53_RS04720	0.47	-1.3
1,098,662	-		LRK53_RS04720	0.47	-1.1
1,098,662	-		LRK53_RS04720	0.47	-0.4
1,098,662	-		LRK53_RS04720	0.47	-1.8
1,098,676	+		LRK53_RS04720	0.49	-0.4
1,098,676	+		LRK53_RS04720	0.49	+1.3
1,098,676	+		LRK53_RS04720	0.49	+0.3
1,098,676	+		LRK53_RS04720	0.49	-2.1
1,098,881	+		LRK53_RS04720	0.83	-1.7
1,098,881	+		LRK53_RS04720	0.83	-1.0
1,098,881	+		LRK53_RS04720	0.83	-0.5
1,098,881	+		LRK53_RS04720	0.83	-0.4
1,098,881	+		LRK53_RS04720	0.83	-1.9
1,098,881	+		LRK53_RS04720	0.83	-1.5
1,098,881	+		LRK53_RS04720	0.83	+1.9
1,098,881	+		LRK53_RS04720	0.83	-0.4
1,098,881	+		LRK53_RS04720	0.83	-1.0
1,098,881	+		LRK53_RS04720	0.83	-2.4
1,098,881	+		LRK53_RS04720	0.83	-0.3
1,098,881	+		LRK53_RS04720	0.83	-2.9
1,098,881	+		LRK53_RS04720	0.83	-1.1
1,098,881	+		LRK53_RS04720	0.83	-1.8
1,098,882	-		LRK53_RS04720	0.83	-0.8
1,098,882	-		LRK53_RS04720	0.83	-0.1
1,098,882	-		LRK53_RS04720	0.83	-1.8
1,098,882	-		LRK53_RS04720	0.83	-0.8
1,098,882	-		LRK53_RS04720	0.83	-0.8
1,098,882	-		LRK53_RS04720	0.83	-2.4
1,098,882	-		LRK53_RS04720	0.83	+0.2
1,098,882	-		LRK53_RS04720	0.83	-1.0
1,098,882	-		LRK53_RS04720	0.83	-0.4
1,098,882	-		LRK53_RS04720	0.83	-0.7
1,098,882	-		LRK53_RS04720	0.83	+1.4
1,098,882	-		LRK53_RS04720	0.83	-0.2
1,098,882	-		LRK53_RS04720	0.83	-2.0
1,098,882	-		LRK53_RS04720	0.83	-0.6
1,098,901	+		LRK53_RS04720	0.87	-0.6
1,098,901	+		LRK53_RS04720	0.87	-0.3
1,098,901	+		LRK53_RS04720	0.87	-1.7
1,098,902	-		LRK53_RS04720	0.87	-1.2
1,099,085	+				-0.5
1,099,086	-				-0.1
1,099,086	-				-0.9
1,099,113	+				-0.9
1,099,113	+				-0.8
1,099,114	-				-0.8
1,099,114	-				+1.5
1,099,114	-				-0.1
1,099,239	+				-0.7
1,099,239	+				+0.3
1,099,239	+				-1.5
1,099,239	+				+1.9
1,099,239	+				-1.6
1,099,239	+				-1.2
1,099,239	+				-3.4
1,099,239	+				-1.5
1,099,239	+				-1.5
1,099,239	+				-0.2
1,099,239	+				+0.3
1,099,239	+				-1.8
1,099,239	+				-2.0
1,099,239	+				+1.7
1,099,239	+				-1.6
1,099,239	+				-0.4
1,099,239	+				-0.7
1,099,239	+				-0.2
1,099,239	+				-0.6
1,099,239	+				-0.7
1,099,239	+				+0.3
1,099,239	+				+0.7
1,099,239	+				-0.3
1,099,239	+				-0.5
1,099,239	+				-1.5
1,099,239	+				-0.6
1,099,239	+				-0.8
1,099,239	+				-0.8
1,099,239	+				-0.7
1,099,239	+				-0.5
1,099,239	+				-1.1
1,099,239	+				-2.2
1,099,239	+				-0.6
1,099,239	+				-1.1
1,099,240	-				+0.3
1,099,240	-				-0.1
1,099,240	-				-2.1
1,099,240	-				-0.4
1,099,240	-				-3.5
1,099,240	-				-2.0
1,099,240	-				-0.6
1,099,240	-				-1.6
1,099,240	-				-1.4
1,099,240	-				+1.1
1,099,240	-				-0.6
1,099,240	-				+0.1
1,099,240	-				-0.5
1,099,240	-				-3.0
1,099,240	-				-0.7
1,099,240	-				-0.3
1,099,240	-				+0.1
1,099,424	+		LRK53_RS04725	0.12	-0.9
1,099,424	+		LRK53_RS04725	0.12	-1.3
1,099,424	+		LRK53_RS04725	0.12	-0.5
1,099,424	+		LRK53_RS04725	0.12	-1.1
1,099,424	+		LRK53_RS04725	0.12	-0.4
1,099,424	+		LRK53_RS04725	0.12	-1.2
1,099,424	+		LRK53_RS04725	0.12	+0.7
1,099,424	+		LRK53_RS04725	0.12	+1.5
1,099,425	-		LRK53_RS04725	0.12	-0.9
1,099,425	-		LRK53_RS04725	0.12	-1.6
1,099,425	-		LRK53_RS04725	0.12	-0.9
1,099,425	-		LRK53_RS04725	0.12	+0.1
1,099,425	-		LRK53_RS04725	0.12	+2.7
1,099,425	-		LRK53_RS04725	0.12	-1.8
1,099,425	-		LRK53_RS04725	0.12	-1.6
1,099,425	-		LRK53_RS04725	0.12	+0.5
1,099,425	-		LRK53_RS04725	0.12	-1.6
1,099,425	-		LRK53_RS04725	0.12	-0.8
1,099,425	-		LRK53_RS04725	0.12	+2.4
1,099,425	-		LRK53_RS04725	0.12	-1.3
1,099,425	-		LRK53_RS04725	0.12	-1.0
1,099,426	+		LRK53_RS04725	0.12	-0.0
1,099,426	+		LRK53_RS04725	0.12	-0.5
1,099,426	+		LRK53_RS04725	0.12	+0.3
1,099,427	-		LRK53_RS04725	0.12	-1.9
1,099,427	-		LRK53_RS04725	0.12	-0.5
1,099,427	-		LRK53_RS04725	0.12	-0.6
1,099,805	+		LRK53_RS04725	0.36	+0.2
1,099,805	+		LRK53_RS04725	0.36	-0.5
1,099,805	+		LRK53_RS04725	0.36	-1.1
1,099,805	+		LRK53_RS04725	0.36	+0.0
1,099,806	-		LRK53_RS04725	0.36	-0.4
1,099,857	+		LRK53_RS04725	0.39	+0.8
1,099,857	+		LRK53_RS04725	0.39	-0.7
1,099,883	+		LRK53_RS04725	0.41	+0.1
1,099,883	+		LRK53_RS04725	0.41	+1.1
1,099,883	+		LRK53_RS04725	0.41	-0.6
1,099,883	+		LRK53_RS04725	0.41	-1.2
1,099,883	+		LRK53_RS04725	0.41	-2.8
1,099,884	-		LRK53_RS04725	0.41	+0.1
1,099,884	-		LRK53_RS04725	0.41	-2.5
1,099,884	-		LRK53_RS04725	0.41	+0.1
1,099,884	-		LRK53_RS04725	0.41	-0.3
1,099,884	-		LRK53_RS04725	0.41	-0.8
1,099,884	-		LRK53_RS04725	0.41	-1.1
1,099,886	+		LRK53_RS04725	0.41	-1.1
1,099,922	+		LRK53_RS04725	0.43	-0.4
1,099,997	+		LRK53_RS04725	0.48	-0.8
1,099,997	+		LRK53_RS04725	0.48	-0.3
1,099,997	+		LRK53_RS04725	0.48	-0.3
1,099,997	+		LRK53_RS04725	0.48	-0.6
1,099,997	+		LRK53_RS04725	0.48	-1.0
1,099,997	+		LRK53_RS04725	0.48	+1.8
1,099,998	-		LRK53_RS04725	0.48	-1.3
1,099,998	-		LRK53_RS04725	0.48	-1.9
1,099,998	-		LRK53_RS04725	0.48	-0.3
1,100,009	+		LRK53_RS04725	0.49	-1.0
1,100,009	+		LRK53_RS04725	0.49	-1.3
1,100,009	+		LRK53_RS04725	0.49	+1.8
1,100,009	+		LRK53_RS04725	0.49	-0.4
1,100,010	-		LRK53_RS04725	0.49	-1.2
1,100,010	-		LRK53_RS04725	0.49	-3.8
1,100,010	-		LRK53_RS04725	0.49	-0.7
1,100,096	+		LRK53_RS04725	0.54	-0.1
1,100,096	+		LRK53_RS04725	0.54	-1.5
1,100,096	+		LRK53_RS04725	0.54	+0.5
1,100,096	+		LRK53_RS04725	0.54	-1.6
1,100,096	+		LRK53_RS04725	0.54	-2.2
1,100,096	+		LRK53_RS04725	0.54	-2.0
1,100,096	+		LRK53_RS04725	0.54	-1.2
1,100,096	+		LRK53_RS04725	0.54	-0.7
1,100,097	-		LRK53_RS04725	0.54	-2.8
1,100,097	-		LRK53_RS04725	0.54	-1.1
1,100,097	-		LRK53_RS04725	0.54	+0.8
1,100,097	-		LRK53_RS04725	0.54	+0.1
1,100,097	-		LRK53_RS04725	0.54	-0.6
1,100,180	+		LRK53_RS04725	0.60	+0.1
1,100,180	+		LRK53_RS04725	0.60	-0.8
1,100,180	+		LRK53_RS04725	0.60	-1.8
1,100,180	+		LRK53_RS04725	0.60	-0.0
1,100,180	+		LRK53_RS04725	0.60	-0.7
1,100,180	+		LRK53_RS04725	0.60	-0.8
1,100,180	+		LRK53_RS04725	0.60	+0.6
1,100,180	+		LRK53_RS04725	0.60	-0.8
1,100,180	+		LRK53_RS04725	0.60	-2.0
1,100,181	-		LRK53_RS04725	0.60	-1.7
1,100,181	-		LRK53_RS04725	0.60	-0.8
1,100,181	-		LRK53_RS04725	0.60	-0.5
1,100,181	-		LRK53_RS04725	0.60	+0.3
1,100,181	-		LRK53_RS04725	0.60	+0.5
1,100,181	-		LRK53_RS04725	0.60	+0.5
1,100,198	+		LRK53_RS04725	0.61	-0.8
1,100,198	+		LRK53_RS04725	0.61	-0.3
1,100,198	+		LRK53_RS04725	0.61	-1.9
1,100,198	+		LRK53_RS04725	0.61	-1.2
1,100,198	+		LRK53_RS04725	0.61	-1.2
1,100,199	-		LRK53_RS04725	0.61	-1.6
1,100,199	-		LRK53_RS04725	0.61	-1.7
1,100,199	-		LRK53_RS04725	0.61	-1.1
1,100,199	-		LRK53_RS04725	0.61	-1.2
1,100,199	-		LRK53_RS04725	0.61	-1.4
1,100,199	-		LRK53_RS04725	0.61	-2.7
1,100,225	+		LRK53_RS04725	0.62	-1.7
1,100,226	-		LRK53_RS04725	0.63	-0.7
1,100,226	-		LRK53_RS04725	0.63	-1.3
1,100,226	-		LRK53_RS04725	0.63	-0.1
1,100,397	+		LRK53_RS04725	0.73	-0.9
1,100,397	+		LRK53_RS04725	0.73	+0.7
1,100,397	+		LRK53_RS04725	0.73	-1.4
1,100,397	+		LRK53_RS04725	0.73	-1.3
1,100,397	+		LRK53_RS04725	0.73	-2.5
1,100,397	+		LRK53_RS04725	0.73	-1.8
1,100,397	+		LRK53_RS04725	0.73	+1.0
1,100,397	+		LRK53_RS04725	0.73	-0.4
1,100,397	+		LRK53_RS04725	0.73	-1.2
1,100,398	-		LRK53_RS04725	0.73	-1.1
1,100,398	-		LRK53_RS04725	0.73	-0.7
1,100,398	-		LRK53_RS04725	0.73	-0.7
1,100,398	-		LRK53_RS04725	0.73	-0.6
1,100,398	-		LRK53_RS04725	0.73	+0.4
1,100,398	-		LRK53_RS04725	0.73	-1.1
1,100,398	-		LRK53_RS04725	0.73	-1.1
1,100,456	+		LRK53_RS04725	0.77	-0.6
1,100,456	+		LRK53_RS04725	0.77	-0.4
1,100,456	+		LRK53_RS04725	0.77	+0.1
1,100,456	+		LRK53_RS04725	0.77	-0.3
1,100,456	+		LRK53_RS04725	0.77	-1.0
1,100,456	+		LRK53_RS04725	0.77	-1.0
1,100,456	+		LRK53_RS04725	0.77	-0.5
1,100,456	+		LRK53_RS04725	0.77	-2.2
1,100,456	+		LRK53_RS04725	0.77	+1.0
1,100,456	+		LRK53_RS04725	0.77	-2.8
1,100,456	+		LRK53_RS04725	0.77	-1.7
1,100,456	+		LRK53_RS04725	0.77	+0.1
1,100,456	+		LRK53_RS04725	0.77	-1.7
1,100,456	+		LRK53_RS04725	0.77	-1.1
1,100,457	-		LRK53_RS04725	0.77	-0.7
1,100,457	-		LRK53_RS04725	0.77	+0.6
1,100,457	-		LRK53_RS04725	0.77	-0.3
1,100,457	-		LRK53_RS04725	0.77	-0.3
1,100,457	-		LRK53_RS04725	0.77	+0.7
1,100,457	-		LRK53_RS04725	0.77	-0.3
1,100,457	-		LRK53_RS04725	0.77	-1.9
1,100,457	-		LRK53_RS04725	0.77	-0.3
1,100,457	-		LRK53_RS04725	0.77	-0.3
1,100,457	-		LRK53_RS04725	0.77	-1.9
1,100,457	-		LRK53_RS04725	0.77	-0.4
1,100,457	-		LRK53_RS04725	0.77	+0.4
1,100,457	-		LRK53_RS04725	0.77	-3.1
1,100,457	-		LRK53_RS04725	0.77	-2.3
1,100,457	-		LRK53_RS04725	0.77	-1.1
1,100,457	-		LRK53_RS04725	0.77	-0.1
1,100,457	-		LRK53_RS04725	0.77	+1.7
1,100,457	-		LRK53_RS04725	0.77	-2.7
1,100,690	+				-0.5
1,100,690	+				-0.9
1,100,690	+				-1.3
1,100,690	+				-0.7
1,100,690	+				-0.8
1,100,690	+				-0.8
1,100,690	+				-1.7
1,100,690	+				+0.3
1,100,690	+				-2.6
1,100,690	+				-0.5
1,100,690	+				-0.6
1,100,691	-				-1.0
1,100,691	-				-1.1
1,100,691	-				-0.2
1,100,691	-				+0.5
1,100,691	-				-0.8
1,100,691	-				-0.1
1,100,691	-				-1.1
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1,100,704	-				-1.8
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1,100,750	+				-2.4
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1,100,751	-				+1.5
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1,101,006	+				-2.1
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1,101,007	-				+3.1
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1,101,120	+		LRK53_RS04730	0.15	+3.1
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1,101,121	-		LRK53_RS04730	0.15	-2.1
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1,101,121	-		LRK53_RS04730	0.15	-2.7
1,101,121	-		LRK53_RS04730	0.15	-1.1
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1,101,186	+		LRK53_RS04730	0.19	-2.1
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1,101,384	+		LRK53_RS04730	0.31	-0.7
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1,101,385	-		LRK53_RS04730	0.31	-2.3
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1,101,559	-		LRK53_RS04730	0.41	-3.1
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1,101,585	+		LRK53_RS04730	0.43	-1.8
1,101,585	+		LRK53_RS04730	0.43	-2.8
1,101,585	+		LRK53_RS04730	0.43	-0.3
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1,101,585	+		LRK53_RS04730	0.43	-2.5
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1,101,585	+		LRK53_RS04730	0.43	-1.3
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1,101,585	+		LRK53_RS04730	0.43	-1.1
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1,101,585	+		LRK53_RS04730	0.43	-2.5
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1,101,586	-		LRK53_RS04730	0.43	-1.1
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1,101,586	-		LRK53_RS04730	0.43	-0.4
1,101,586	-		LRK53_RS04730	0.43	-0.3
1,101,586	-		LRK53_RS04730	0.43	-1.9
1,101,586	-		LRK53_RS04730	0.43	-1.4
1,101,768	+		LRK53_RS04730	0.54	-1.2
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1,101,768	+		LRK53_RS04730	0.54	-1.8
1,101,768	+		LRK53_RS04730	0.54	-0.8
1,101,768	+		LRK53_RS04730	0.54	-0.4
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1,101,768	+		LRK53_RS04730	0.54	-0.3
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1,101,768	+		LRK53_RS04730	0.54	-0.4
1,101,768	+		LRK53_RS04730	0.54	-0.1
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1,101,769	-		LRK53_RS04730	0.54	-1.8
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1,101,769	-		LRK53_RS04730	0.54	-0.2
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1,101,769	-		LRK53_RS04730	0.54	-1.3
1,101,769	-		LRK53_RS04730	0.54	-0.1
1,101,769	-		LRK53_RS04730	0.54	-2.0
1,101,769	-		LRK53_RS04730	0.54	+0.1
1,101,769	-		LRK53_RS04730	0.54	+0.3
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1,101,769	-		LRK53_RS04730	0.54	-1.7
1,101,769	-		LRK53_RS04730	0.54	-2.9
1,101,769	-		LRK53_RS04730	0.54	-2.5
1,101,769	-		LRK53_RS04730	0.54	+0.3
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1,101,769	-		LRK53_RS04730	0.54	-0.3
1,101,769	-		LRK53_RS04730	0.54	+2.2
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