Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS04615

Experiment: planktonic; Day4; SGW;

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	planktonic; Day4; SGW;
1,072,062	+		LRK53_RS04610	0.11	-0.6
1,072,404	+		LRK53_RS04610	0.45	-2.2
1,072,404	+		LRK53_RS04610	0.45	-1.0
1,072,575	+		LRK53_RS04610	0.63	-1.9
1,072,575	+		LRK53_RS04610	0.63	-0.8
1,072,575	+		LRK53_RS04610	0.63	-1.1
1,072,575	+		LRK53_RS04610	0.63	-0.2
1,072,575	+		LRK53_RS04610	0.63	-1.4
1,072,575	+		LRK53_RS04610	0.63	-0.4
1,072,575	+		LRK53_RS04610	0.63	+0.0
1,072,576	-		LRK53_RS04610	0.63	-1.7
1,072,576	-		LRK53_RS04610	0.63	-0.1
1,072,576	-		LRK53_RS04610	0.63	-1.3
1,072,638	+		LRK53_RS04610	0.69	+0.3
1,072,638	+		LRK53_RS04610	0.69	-0.3
1,072,638	+		LRK53_RS04610	0.69	+0.4
1,072,638	+		LRK53_RS04610	0.69	-2.0
1,072,638	+		LRK53_RS04610	0.69	-0.7
1,072,638	+		LRK53_RS04610	0.69	+1.4
1,072,638	+		LRK53_RS04610	0.69	+0.3
1,072,639	-		LRK53_RS04610	0.69	-0.6
1,072,639	-		LRK53_RS04610	0.69	-1.1
1,072,639	-		LRK53_RS04610	0.69	+1.5
1,072,639	-		LRK53_RS04610	0.69	+0.3
1,072,639	-		LRK53_RS04610	0.69	-1.0
1,072,639	-		LRK53_RS04610	0.69	-2.1
1,072,689	+		LRK53_RS04610	0.74	-1.1
1,072,689	+		LRK53_RS04610	0.74	-1.7
1,072,975	+				-2.6
1,072,975	+				-0.7
1,072,975	+				+0.3
1,072,975	+				-1.0
1,072,975	+				-2.7
1,072,975	+				-1.7
1,072,975	+				-1.5
1,072,975	+				-1.9
1,072,975	+				-0.8
1,072,975	+				-0.8
1,072,975	+				-2.7
1,072,975	+				-1.1
1,072,976	-				-1.2
1,072,976	-				+0.1
1,072,976	-				-1.7
1,072,976	-				-1.0
1,072,976	-				+0.5
1,072,976	-				-1.2
1,072,976	-				-0.9
1,072,976	-				-0.2
1,072,976	-				-0.4
1,072,976	-				-0.8
1,072,976	-				-1.8
1,072,976	-				+1.7
1,072,976	-				-0.9
1,072,976	-				-0.3
1,072,976	-				-1.9
1,072,980	+				-0.3
1,072,981	-				-3.5
1,072,994	+				+0.3
1,072,994	+				-1.2
1,072,994	+				+0.6
1,072,994	+				+0.7
1,072,994	+				+0.6
1,072,994	+				-0.3
1,072,995	-				-1.1
1,072,995	-				+1.1
1,072,995	-				-0.8
1,072,995	-				-1.9
1,072,995	-				-0.6
1,072,995	-				-1.3
1,072,995	-				-0.1
1,072,995	-				-0.3
1,072,995	-				-0.6
1,072,995	-				-1.7
1,073,084	+				+0.1
1,073,084	+				-1.1
1,073,084	+				+0.1
1,073,085	-				-0.6
1,073,085	-				+0.3
1,073,085	-				-0.9
1,073,085	-				+0.1
1,073,085	-				-2.1
1,073,085	-				-1.1
1,073,085	-				-0.5
1,073,085	-				-0.8
1,073,168	+				-0.7
1,073,761	+		LRK53_RS04615	0.26	-1.9
1,073,761	+		LRK53_RS04615	0.26	-1.9
1,073,761	+		LRK53_RS04615	0.26	+0.5
1,073,761	+		LRK53_RS04615	0.26	-1.0
1,073,761	+		LRK53_RS04615	0.26	-0.5
1,073,761	+		LRK53_RS04615	0.26	-0.2
1,073,761	+		LRK53_RS04615	0.26	+0.3
1,073,762	-		LRK53_RS04615	0.26	-0.5
1,073,762	-		LRK53_RS04615	0.26	-0.3
1,073,762	-		LRK53_RS04615	0.26	-2.6
1,073,762	-		LRK53_RS04615	0.26	-0.5
1,074,221	+		LRK53_RS04615	0.42	-0.6
1,074,221	+		LRK53_RS04615	0.42	-0.9
1,074,221	+		LRK53_RS04615	0.42	+1.2
1,074,221	+		LRK53_RS04615	0.42	-2.2
1,074,221	+		LRK53_RS04615	0.42	-1.5
1,074,222	-		LRK53_RS04615	0.42	-1.1
1,074,222	-		LRK53_RS04615	0.42	-2.2
1,074,222	-		LRK53_RS04615	0.42	-0.7
1,074,222	-		LRK53_RS04615	0.42	-1.0
1,074,222	-		LRK53_RS04615	0.42	-1.3
1,074,287	+		LRK53_RS04615	0.45	+1.3
1,074,287	+		LRK53_RS04615	0.45	-1.8
1,074,287	+		LRK53_RS04615	0.45	+1.5
1,074,287	+		LRK53_RS04615	0.45	-2.0
1,074,287	+		LRK53_RS04615	0.45	-0.4
1,074,287	+		LRK53_RS04615	0.45	-0.1
1,074,287	+		LRK53_RS04615	0.45	-0.6
1,074,287	+		LRK53_RS04615	0.45	+1.4
1,074,287	+		LRK53_RS04615	0.45	-0.5
1,074,287	+		LRK53_RS04615	0.45	+0.1
1,074,287	+		LRK53_RS04615	0.45	-0.5
1,074,287	+		LRK53_RS04615	0.45	+0.8
1,074,287	+		LRK53_RS04615	0.45	-0.2
1,074,287	+		LRK53_RS04615	0.45	-1.2
1,074,287	+		LRK53_RS04615	0.45	+0.5
1,074,287	+		LRK53_RS04615	0.45	-0.7
1,074,288	-		LRK53_RS04615	0.45	-0.9
1,074,288	-		LRK53_RS04615	0.45	-2.1
1,074,288	-		LRK53_RS04615	0.45	-0.9
1,074,288	-		LRK53_RS04615	0.45	-2.1
1,074,288	-		LRK53_RS04615	0.45	-1.7
1,074,288	-		LRK53_RS04615	0.45	+0.1
1,074,288	-		LRK53_RS04615	0.45	+0.2
1,074,288	-		LRK53_RS04615	0.45	-1.2
1,074,288	-		LRK53_RS04615	0.45	+0.5
1,074,288	-		LRK53_RS04615	0.45	-1.5
1,074,288	-		LRK53_RS04615	0.45	-0.8
1,074,288	-		LRK53_RS04615	0.45	-0.7
1,074,288	-		LRK53_RS04615	0.45	-2.4
1,074,288	-		LRK53_RS04615	0.45	-1.6
1,074,288	-		LRK53_RS04615	0.45	-1.4
1,074,288	-		LRK53_RS04615	0.45	+0.4
1,074,288	-		LRK53_RS04615	0.45	-2.2
1,074,731	+		LRK53_RS04615	0.60	-1.2
1,074,732	-		LRK53_RS04615	0.60	-0.8
1,074,809	+		LRK53_RS04615	0.63	-2.2
1,074,809	+		LRK53_RS04615	0.63	+1.2
1,074,809	+		LRK53_RS04615	0.63	-0.4
1,074,809	+		LRK53_RS04615	0.63	-1.1
1,074,809	+		LRK53_RS04615	0.63	-1.8
1,074,809	+		LRK53_RS04615	0.63	-1.7
1,074,809	+		LRK53_RS04615	0.63	-0.7
1,074,810	-		LRK53_RS04615	0.63	-0.4
1,074,810	-		LRK53_RS04615	0.63	-2.1
1,074,810	-		LRK53_RS04615	0.63	-0.2
1,074,810	-		LRK53_RS04615	0.63	-0.9
1,074,810	-		LRK53_RS04615	0.63	+0.9
1,074,810	-		LRK53_RS04615	0.63	-1.8
1,074,810	-		LRK53_RS04615	0.63	+1.3
1,074,810	-		LRK53_RS04615	0.63	+1.1
1,074,810	-		LRK53_RS04615	0.63	-0.9
1,074,845	+		LRK53_RS04615	0.64	-1.4
1,074,845	+		LRK53_RS04615	0.64	-0.1
1,074,845	+		LRK53_RS04615	0.64	-1.4
1,074,845	+		LRK53_RS04615	0.64	-2.3
1,074,846	-		LRK53_RS04615	0.64	+0.7
1,074,884	+		LRK53_RS04615	0.66	-0.6
1,074,885	-		LRK53_RS04615	0.66	-0.8
1,074,890	+		LRK53_RS04615	0.66	-0.4
1,074,890	+		LRK53_RS04615	0.66	+0.1
1,074,890	+		LRK53_RS04615	0.66	-0.1
1,074,890	+		LRK53_RS04615	0.66	-1.5
1,074,890	+		LRK53_RS04615	0.66	-2.7
1,074,890	+		LRK53_RS04615	0.66	+0.2
1,074,890	+		LRK53_RS04615	0.66	-1.0
1,074,891	-		LRK53_RS04615	0.66	-1.7
1,074,891	-		LRK53_RS04615	0.66	-0.7
1,074,891	-		LRK53_RS04615	0.66	-0.7
1,074,891	-		LRK53_RS04615	0.66	-0.6
1,074,891	-		LRK53_RS04615	0.66	-2.6
1,074,891	-		LRK53_RS04615	0.66	+0.1
1,075,373	+		LRK53_RS04615	0.83	+1.1
1,075,374	-		LRK53_RS04615	0.83	-0.4
1,075,374	-		LRK53_RS04615	0.83	-1.8
1,075,459	-		LRK53_RS04615	0.86	-0.4
1,075,595	+				+0.3
1,075,595	+				-1.1
1,075,596	-				-0.7
1,075,596	-				-1.4
1,075,596	-				-0.6
1,075,626	-				+1.7
1,075,626	-				-1.3
1,075,694	+				-1.3
1,075,694	+				-1.2
1,075,694	+				+0.1
1,075,694	+				-0.1
1,075,694	+				-1.1
1,075,695	-				-2.0
1,075,695	-				-2.3
1,075,695	-				-0.3
1,075,695	-				-2.9
1,075,695	-				+0.9
1,075,695	-				-1.0
1,075,695	-				-1.6
1,075,695	-				+1.1
1,075,698	+				-0.4
1,075,698	+				+0.3
1,075,698	+				-0.0
1,075,698	+				-0.4
1,075,698	+				-0.9
1,075,698	+				-1.6
1,075,698	+				-0.1
1,075,698	+				-0.1
1,075,698	+				+0.3
1,075,698	+				-3.3
1,075,698	+				-1.4
1,075,698	+				+0.2
1,075,698	+				-0.4
1,075,698	+				-0.5
1,075,698	+				-1.7
1,075,698	+				+0.9
1,075,698	+				-0.7
1,075,698	+				-1.2
1,075,698	+				-1.4
1,075,698	+				-0.7
1,075,699	-				-0.8
1,075,699	-				-0.6
1,075,699	-				-1.7
1,075,699	-				-1.2
1,075,699	-				-1.9
1,075,699	-				-0.3
1,075,699	-				-0.7
1,075,699	-				-1.0
1,075,699	-				-0.2
1,075,699	-				-1.1
1,075,699	-				-0.4
1,075,699	-				-1.0
1,075,699	-				-0.7
1,075,699	-				-0.7
1,075,699	-				+0.3
1,075,699	-				-1.4
1,075,699	-				+0.5
1,075,699	-				-0.8
1,075,699	-				-1.1
1,075,699	-				+0.5
1,075,699	-				-0.5
1,075,699	-				+1.2
1,075,699	-				-0.2
1,075,699	-				-0.2
1,075,699	-				-0.5
1,075,699	-				-0.7
1,075,699	-				+0.1
1,075,699	-				-1.1
1,075,836	+				-3.2
1,075,836	+				+1.1
1,075,836	+				-0.9
1,075,836	+				-1.2
1,075,836	+				-1.9
1,075,836	+				+1.5
1,075,836	+				-0.8
1,075,836	+				-2.0
1,075,836	+				-0.1
1,075,836	+				-0.5
1,075,836	+				-1.3
1,075,837	-				-1.0
1,075,837	-				-0.6
1,075,837	-				+0.2
1,075,837	-				+0.8
1,075,837	-				-1.8
1,075,837	-				-0.6
1,075,837	-				-1.1
1,075,837	-				-0.5
1,076,007	+				+0.1
1,076,007	+				-0.2
1,076,007	+				+0.3
1,076,007	+				+0.5
1,076,008	-				-2.4
1,076,008	-				-0.0
1,076,008	-				+0.0
1,076,008	-				-1.8
1,076,008	-				+1.1
1,076,008	-				-1.1
1,076,008	-				-2.2
1,076,008	-				-0.2
1,076,008	-				-1.5
1,076,008	-				-1.0
1,076,008	-				-0.5
1,076,008	-				-0.4
1,076,059	-		LRK53_RS04620	0.14	-1.8
1,076,129	+		LRK53_RS04620	0.22	-1.2
1,076,129	+		LRK53_RS04620	0.22	-0.4
1,076,130	-		LRK53_RS04620	0.22	-0.9
1,076,130	-		LRK53_RS04620	0.22	-0.8
1,076,130	-		LRK53_RS04620	0.22	-0.1
1,076,130	-		LRK53_RS04620	0.22	-1.1
1,076,201	+		LRK53_RS04620	0.30	-2.0
1,076,201	+		LRK53_RS04620	0.30	-1.1
1,076,201	+		LRK53_RS04620	0.30	-2.5
1,076,201	+		LRK53_RS04620	0.30	-0.7
1,076,201	+		LRK53_RS04620	0.30	-1.8
1,076,201	+		LRK53_RS04620	0.30	+0.1
1,076,202	-		LRK53_RS04620	0.30	-1.6
1,076,202	-		LRK53_RS04620	0.30	-1.7
1,076,202	-		LRK53_RS04620	0.30	-1.0
1,076,202	-		LRK53_RS04620	0.30	-0.5
1,076,202	-		LRK53_RS04620	0.30	+0.7
1,076,202	-		LRK53_RS04620	0.30	-0.8
1,076,202	-		LRK53_RS04620	0.30	-2.2
1,076,202	-		LRK53_RS04620	0.30	-1.0
1,076,456	+		LRK53_RS04620	0.59	-1.1
1,076,456	+		LRK53_RS04620	0.59	-1.8
1,076,456	+		LRK53_RS04620	0.59	-1.6
1,076,457	-		LRK53_RS04620	0.59	-0.9
1,076,457	-		LRK53_RS04620	0.59	+0.5
1,076,457	-		LRK53_RS04620	0.59	-2.6
1,076,600	+		LRK53_RS04620	0.75	-0.4
1,076,600	+		LRK53_RS04620	0.75	-2.1
1,076,600	+		LRK53_RS04620	0.75	-0.2
1,076,600	+		LRK53_RS04620	0.75	-0.2
1,076,600	+		LRK53_RS04620	0.75	-3.0
1,076,600	+		LRK53_RS04620	0.75	-1.6
1,076,600	+		LRK53_RS04620	0.75	+3.7
1,076,600	+		LRK53_RS04620	0.75	-0.6
1,076,601	-		LRK53_RS04620	0.75	-1.0
1,076,601	-		LRK53_RS04620	0.75	-0.2
1,076,601	-		LRK53_RS04620	0.75	-2.5
1,076,601	-		LRK53_RS04620	0.75	-0.1