Experiment: Motility_outer_sample
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS40745 and QEN71_RS40750 are separated by 58 nucleotides QEN71_RS40750 and QEN71_RS40755 overlap by 4 nucleotides
QEN71_RS40745: QEN71_RS40745 - polysaccharide biosynthesis tyrosine autokinase, at 209,602 to 211,857
_RS40745
QEN71_RS40750: QEN71_RS40750 - low molecular weight phosphotyrosine protein phosphatase, at 211,916 to 212,368
_RS40750
QEN71_RS40755: QEN71_RS40755 - polysaccharide biosynthesis/export family protein, at 212,365 to 213,399
_RS40755
Position (kb) 211
212
213 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 210.920 kb on + strand, within QEN71_RS40745 at 210.961 kb on + strand, within QEN71_RS40745 at 210.961 kb on + strand, within QEN71_RS40745 at 210.961 kb on + strand, within QEN71_RS40745 at 210.962 kb on - strand, within QEN71_RS40745 at 210.962 kb on - strand, within QEN71_RS40745 at 211.064 kb on - strand, within QEN71_RS40745 at 211.195 kb on + strand, within QEN71_RS40745 at 211.196 kb on - strand, within QEN71_RS40745 at 211.264 kb on - strand, within QEN71_RS40745 at 211.361 kb on + strand, within QEN71_RS40745 at 211.361 kb on + strand, within QEN71_RS40745 at 211.362 kb on - strand, within QEN71_RS40745 at 211.362 kb on - strand, within QEN71_RS40745 at 211.362 kb on - strand, within QEN71_RS40745 at 211.362 kb on - strand, within QEN71_RS40745 at 211.365 kb on + strand, within QEN71_RS40745 at 211.365 kb on + strand, within QEN71_RS40745 at 211.366 kb on - strand, within QEN71_RS40745 at 211.366 kb on - strand, within QEN71_RS40745 at 211.430 kb on + strand, within QEN71_RS40745 at 211.431 kb on - strand, within QEN71_RS40745 at 211.579 kb on + strand, within QEN71_RS40745 at 211.579 kb on + strand, within QEN71_RS40745 at 211.579 kb on + strand, within QEN71_RS40745 at 211.580 kb on - strand, within QEN71_RS40745 at 211.580 kb on - strand, within QEN71_RS40745 at 211.609 kb on + strand, within QEN71_RS40745 at 211.650 kb on + strand at 211.792 kb on + strand at 211.792 kb on + strand at 211.792 kb on + strand at 211.839 kb on + strand at 211.846 kb on - strand at 211.902 kb on + strand at 211.903 kb on - strand at 211.907 kb on - strand at 211.907 kb on - strand at 211.980 kb on - strand, within QEN71_RS40750 at 212.004 kb on + strand, within QEN71_RS40750 at 212.005 kb on - strand, within QEN71_RS40750 at 212.151 kb on - strand, within QEN71_RS40750 at 212.345 kb on + strand at 212.345 kb on + strand at 212.345 kb on + strand at 212.345 kb on + strand at 212.346 kb on - strand at 212.346 kb on - strand at 212.346 kb on - strand at 212.346 kb on - strand at 212.431 kb on - strand at 212.463 kb on - strand at 212.576 kb on + strand, within QEN71_RS40755 at 212.576 kb on + strand, within QEN71_RS40755 at 212.576 kb on + strand, within QEN71_RS40755 at 212.576 kb on + strand, within QEN71_RS40755 at 212.576 kb on + strand, within QEN71_RS40755 at 212.576 kb on + strand, within QEN71_RS40755 at 212.576 kb on + strand, within QEN71_RS40755 at 212.577 kb on - strand, within QEN71_RS40755 at 212.577 kb on - strand, within QEN71_RS40755 at 212.578 kb on + strand, within QEN71_RS40755 at 212.578 kb on + strand, within QEN71_RS40755 at 212.578 kb on + strand, within QEN71_RS40755 at 212.578 kb on + strand, within QEN71_RS40755 at 212.578 kb on + strand, within QEN71_RS40755 at 212.579 kb on - strand, within QEN71_RS40755 at 212.579 kb on - strand, within QEN71_RS40755 at 212.579 kb on - strand, within QEN71_RS40755 at 212.579 kb on - strand, within QEN71_RS40755 at 212.579 kb on - strand, within QEN71_RS40755 at 212.699 kb on - strand, within QEN71_RS40755 at 212.702 kb on + strand, within QEN71_RS40755 at 212.810 kb on + strand, within QEN71_RS40755 at 212.811 kb on - strand, within QEN71_RS40755 at 212.894 kb on - strand, within QEN71_RS40755 at 212.913 kb on + strand, within QEN71_RS40755 at 212.914 kb on - strand, within QEN71_RS40755 at 213.012 kb on - strand, within QEN71_RS40755 at 213.031 kb on + strand, within QEN71_RS40755 at 213.099 kb on + strand, within QEN71_RS40755 at 213.340 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Motility_outer_sample remove 210,920 + QEN71_RS40745 0.58 -0.1 210,961 + QEN71_RS40745 0.60 -0.3 210,961 + QEN71_RS40745 0.60 -0.2 210,961 + QEN71_RS40745 0.60 +2.1 210,962 - QEN71_RS40745 0.60 +0.5 210,962 - QEN71_RS40745 0.60 +0.8 211,064 - QEN71_RS40745 0.65 -1.9 211,195 + QEN71_RS40745 0.71 +0.3 211,196 - QEN71_RS40745 0.71 -1.5 211,264 - QEN71_RS40745 0.74 +0.3 211,361 + QEN71_RS40745 0.78 -0.8 211,361 + QEN71_RS40745 0.78 -1.8 211,362 - QEN71_RS40745 0.78 -0.2 211,362 - QEN71_RS40745 0.78 -1.3 211,362 - QEN71_RS40745 0.78 -0.7 211,362 - QEN71_RS40745 0.78 +0.9 211,365 + QEN71_RS40745 0.78 +2.0 211,365 + QEN71_RS40745 0.78 +0.0 211,366 - QEN71_RS40745 0.78 +1.3 211,366 - QEN71_RS40745 0.78 -1.0 211,430 + QEN71_RS40745 0.81 -0.0 211,431 - QEN71_RS40745 0.81 +0.4 211,579 + QEN71_RS40745 0.88 -0.1 211,579 + QEN71_RS40745 0.88 -3.6 211,579 + QEN71_RS40745 0.88 -0.2 211,580 - QEN71_RS40745 0.88 -0.7 211,580 - QEN71_RS40745 0.88 -0.5 211,609 + QEN71_RS40745 0.89 +0.0 211,650 + -0.1 211,792 + +0.1 211,792 + +0.3 211,792 + -0.6 211,839 + -0.0 211,846 - -0.6 211,902 + -2.1 211,903 - +0.4 211,907 - +0.8 211,907 - +2.6 211,980 - QEN71_RS40750 0.14 -0.6 212,004 + QEN71_RS40750 0.19 -0.9 212,005 - QEN71_RS40750 0.20 -0.5 212,151 - QEN71_RS40750 0.52 +0.1 212,345 + -0.6 212,345 + -0.0 212,345 + +0.6 212,345 + -0.2 212,346 - -1.8 212,346 - -2.9 212,346 - -1.6 212,346 - -2.1 212,431 - +0.1 212,463 - -0.7 212,576 + QEN71_RS40755 0.20 +1.8 212,576 + QEN71_RS40755 0.20 -0.3 212,576 + QEN71_RS40755 0.20 -0.0 212,576 + QEN71_RS40755 0.20 -0.8 212,576 + QEN71_RS40755 0.20 -0.1 212,576 + QEN71_RS40755 0.20 +0.4 212,576 + QEN71_RS40755 0.20 -0.5 212,577 - QEN71_RS40755 0.20 +1.2 212,577 - QEN71_RS40755 0.20 +0.3 212,578 + QEN71_RS40755 0.21 +1.3 212,578 + QEN71_RS40755 0.21 +0.2 212,578 + QEN71_RS40755 0.21 -0.4 212,578 + QEN71_RS40755 0.21 -0.9 212,578 + QEN71_RS40755 0.21 -2.6 212,579 - QEN71_RS40755 0.21 -1.0 212,579 - QEN71_RS40755 0.21 -0.2 212,579 - QEN71_RS40755 0.21 -1.0 212,579 - QEN71_RS40755 0.21 -0.2 212,579 - QEN71_RS40755 0.21 +0.4 212,699 - QEN71_RS40755 0.32 +0.1 212,702 + QEN71_RS40755 0.33 -1.1 212,810 + QEN71_RS40755 0.43 -2.2 212,811 - QEN71_RS40755 0.43 -0.0 212,894 - QEN71_RS40755 0.51 +1.5 212,913 + QEN71_RS40755 0.53 -0.1 212,914 - QEN71_RS40755 0.53 +1.0 213,012 - QEN71_RS40755 0.63 -0.5 213,031 + QEN71_RS40755 0.64 +0.8 213,099 + QEN71_RS40755 0.71 -0.4 213,340 + +0.1
Or see this region's nucleotide sequence