Experiment: Motility_outer_sample
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS27930 and QEN71_RS27935 are separated by 42 nucleotides QEN71_RS27935 and QEN71_RS27940 are separated by 10 nucleotides QEN71_RS27940 and QEN71_RS27945 are separated by 647 nucleotides
QEN71_RS27930: QEN71_RS27930 - thiazole synthase, at 6,210,638 to 6,211,462
_RS27930
QEN71_RS27935: QEN71_RS27935 - sulfur carrier protein ThiS, at 6,211,505 to 6,211,702
_RS27935
QEN71_RS27940: QEN71_RS27940 - FAD-dependent oxidoreductase, at 6,211,713 to 6,212,861
_RS27940
QEN71_RS27945: QEN71_RS27945 - ABC transporter ATP-binding protein/permease, at 6,213,509 to 6,215,242
_RS27945
Position (kb)
6211
6212
6213 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2 at 6211.703 kb on - strand at 6211.703 kb on - strand at 6211.703 kb on - strand at 6211.703 kb on - strand at 6211.703 kb on - strand at 6211.709 kb on - strand at 6211.709 kb on - strand at 6211.709 kb on - strand at 6211.709 kb on - strand at 6211.709 kb on - strand at 6211.709 kb on - strand at 6211.709 kb on - strand at 6211.709 kb on - strand at 6211.709 kb on - strand at 6211.709 kb on - strand at 6211.709 kb on - strand at 6211.709 kb on - strand at 6211.709 kb on - strand at 6211.709 kb on - strand at 6211.709 kb on - strand at 6211.709 kb on - strand at 6211.709 kb on - strand at 6211.709 kb on - strand at 6211.709 kb on - strand at 6211.709 kb on - strand at 6211.886 kb on - strand, within QEN71_RS27940 at 6211.886 kb on - strand, within QEN71_RS27940 at 6211.886 kb on - strand, within QEN71_RS27940 at 6211.886 kb on - strand, within QEN71_RS27940 at 6211.886 kb on - strand, within QEN71_RS27940 at 6211.886 kb on - strand, within QEN71_RS27940 at 6211.886 kb on - strand, within QEN71_RS27940 at 6211.886 kb on - strand, within QEN71_RS27940 at 6211.886 kb on - strand, within QEN71_RS27940 at 6211.886 kb on - strand, within QEN71_RS27940 at 6211.886 kb on - strand, within QEN71_RS27940 at 6211.886 kb on - strand, within QEN71_RS27940 at 6211.886 kb on - strand, within QEN71_RS27940 at 6211.886 kb on - strand, within QEN71_RS27940 at 6211.886 kb on - strand, within QEN71_RS27940 at 6211.898 kb on - strand, within QEN71_RS27940 at 6212.111 kb on - strand, within QEN71_RS27940 at 6212.111 kb on - strand, within QEN71_RS27940 at 6212.111 kb on - strand, within QEN71_RS27940 at 6212.111 kb on - strand, within QEN71_RS27940 at 6212.111 kb on - strand, within QEN71_RS27940 at 6212.111 kb on - strand, within QEN71_RS27940 at 6212.111 kb on - strand, within QEN71_RS27940 at 6212.111 kb on - strand, within QEN71_RS27940 at 6212.111 kb on - strand, within QEN71_RS27940 at 6212.111 kb on - strand, within QEN71_RS27940 at 6212.111 kb on - strand, within QEN71_RS27940 at 6212.111 kb on - strand, within QEN71_RS27940 at 6212.138 kb on - strand, within QEN71_RS27940 at 6212.138 kb on - strand, within QEN71_RS27940 at 6212.138 kb on - strand, within QEN71_RS27940 at 6212.138 kb on - strand, within QEN71_RS27940 at 6212.138 kb on - strand, within QEN71_RS27940 at 6212.138 kb on - strand, within QEN71_RS27940 at 6212.138 kb on - strand, within QEN71_RS27940 at 6212.138 kb on - strand, within QEN71_RS27940 at 6212.399 kb on - strand, within QEN71_RS27940 at 6212.948 kb on - strand at 6212.948 kb on - strand at 6212.948 kb on - strand at 6212.948 kb on - strand at 6212.948 kb on - strand at 6212.948 kb on - strand at 6212.948 kb on - strand at 6212.948 kb on - strand at 6212.977 kb on - strand at 6212.977 kb on - strand at 6213.002 kb on - strand at 6213.099 kb on - strand at 6213.099 kb on - strand at 6213.099 kb on - strand at 6213.099 kb on - strand at 6213.099 kb on - strand at 6213.099 kb on - strand at 6213.099 kb on - strand at 6213.125 kb on - strand at 6213.125 kb on - strand at 6213.128 kb on - strand at 6213.213 kb on - strand at 6213.213 kb on - strand at 6213.220 kb on - strand at 6213.220 kb on - strand at 6213.220 kb on - strand at 6213.220 kb on - strand at 6213.220 kb on - strand at 6213.245 kb on + strand at 6213.245 kb on + strand at 6213.378 kb on + strand at 6213.379 kb on - strand at 6213.379 kb on - strand at 6213.379 kb on - strand at 6213.379 kb on - strand at 6213.394 kb on + strand at 6213.394 kb on + strand at 6213.395 kb on - strand at 6213.395 kb on - strand at 6213.395 kb on - strand at 6213.395 kb on - strand at 6213.395 kb on - strand at 6213.405 kb on + strand at 6213.405 kb on + strand at 6213.405 kb on + strand at 6213.405 kb on + strand at 6213.405 kb on + strand at 6213.405 kb on + strand at 6213.405 kb on + strand at 6213.406 kb on - strand at 6213.494 kb on + strand at 6213.494 kb on + strand at 6213.494 kb on + strand at 6213.495 kb on - strand at 6213.495 kb on - strand at 6213.495 kb on - strand at 6213.508 kb on + strand at 6213.508 kb on + strand at 6213.508 kb on + strand at 6213.508 kb on + strand at 6213.508 kb on + strand at 6213.508 kb on + strand at 6213.508 kb on + strand at 6213.508 kb on + strand at 6213.508 kb on + strand at 6213.509 kb on - strand at 6213.509 kb on - strand at 6213.509 kb on - strand at 6213.509 kb on - strand at 6213.509 kb on - strand at 6213.509 kb on - strand at 6213.538 kb on + strand at 6213.566 kb on + strand at 6213.567 kb on - strand at 6213.567 kb on - strand at 6213.698 kb on + strand, within QEN71_RS27945 at 6213.698 kb on + strand, within QEN71_RS27945 at 6213.698 kb on + strand, within QEN71_RS27945 at 6213.698 kb on + strand, within QEN71_RS27945 at 6213.698 kb on + strand, within QEN71_RS27945 at 6213.699 kb on - strand, within QEN71_RS27945 at 6213.699 kb on - strand, within QEN71_RS27945 at 6213.699 kb on - strand, within QEN71_RS27945 at 6213.699 kb on - strand, within QEN71_RS27945 at 6213.699 kb on - strand, within QEN71_RS27945 at 6213.699 kb on - strand, within QEN71_RS27945 at 6213.699 kb on - strand, within QEN71_RS27945 at 6213.699 kb on - strand, within QEN71_RS27945 at 6213.699 kb on - strand, within QEN71_RS27945 at 6213.699 kb on - strand, within QEN71_RS27945 at 6213.699 kb on - strand, within QEN71_RS27945 at 6213.699 kb on - strand, within QEN71_RS27945 at 6213.699 kb on - strand, within QEN71_RS27945 at 6213.699 kb on - strand, within QEN71_RS27945 at 6213.704 kb on + strand, within QEN71_RS27945 at 6213.704 kb on + strand, within QEN71_RS27945 at 6213.704 kb on + strand, within QEN71_RS27945 at 6213.704 kb on + strand, within QEN71_RS27945 at 6213.705 kb on - strand, within QEN71_RS27945 at 6213.705 kb on - strand, within QEN71_RS27945 at 6213.705 kb on - strand, within QEN71_RS27945 at 6213.782 kb on + strand, within QEN71_RS27945 at 6213.782 kb on + strand, within QEN71_RS27945 at 6213.782 kb on + strand, within QEN71_RS27945 at 6213.782 kb on + strand, within QEN71_RS27945 at 6213.782 kb on + strand, within QEN71_RS27945 at 6213.782 kb on + strand, within QEN71_RS27945 at 6213.782 kb on + strand, within QEN71_RS27945 at 6213.782 kb on + strand, within QEN71_RS27945 at 6213.782 kb on + strand, within QEN71_RS27945 at 6213.782 kb on + strand, within QEN71_RS27945 at 6213.782 kb on + strand, within QEN71_RS27945 at 6213.783 kb on - strand, within QEN71_RS27945 at 6213.783 kb on - strand, within QEN71_RS27945 at 6213.783 kb on - strand, within QEN71_RS27945 at 6213.783 kb on - strand, within QEN71_RS27945 at 6213.783 kb on - strand, within QEN71_RS27945 at 6213.783 kb on - strand, within QEN71_RS27945 at 6213.783 kb on - strand, within QEN71_RS27945 at 6213.783 kb on - strand, within QEN71_RS27945 at 6213.833 kb on + strand, within QEN71_RS27945
Per-strain Table
Position Strand Gene LocusTag Fraction Motility_outer_sample remove 6,211,703 - -0.6 6,211,703 - +0.2 6,211,703 - +1.2 6,211,703 - +0.0 6,211,703 - -0.1 6,211,709 - +1.2 6,211,709 - -0.1 6,211,709 - -1.1 6,211,709 - -0.7 6,211,709 - +0.3 6,211,709 - -1.1 6,211,709 - +0.5 6,211,709 - -1.0 6,211,709 - -2.5 6,211,709 - +0.1 6,211,709 - -0.5 6,211,709 - -0.6 6,211,709 - -1.0 6,211,709 - -0.8 6,211,709 - -0.9 6,211,709 - +1.9 6,211,709 - +0.7 6,211,709 - +0.9 6,211,709 - +1.6 6,211,709 - +0.3 6,211,886 - QEN71_RS27940 0.15 -0.1 6,211,886 - QEN71_RS27940 0.15 -0.5 6,211,886 - QEN71_RS27940 0.15 -0.5 6,211,886 - QEN71_RS27940 0.15 -1.2 6,211,886 - QEN71_RS27940 0.15 -0.5 6,211,886 - QEN71_RS27940 0.15 -0.8 6,211,886 - QEN71_RS27940 0.15 +0.6 6,211,886 - QEN71_RS27940 0.15 -0.1 6,211,886 - QEN71_RS27940 0.15 -2.3 6,211,886 - QEN71_RS27940 0.15 -0.5 6,211,886 - QEN71_RS27940 0.15 -1.5 6,211,886 - QEN71_RS27940 0.15 -0.9 6,211,886 - QEN71_RS27940 0.15 -0.4 6,211,886 - QEN71_RS27940 0.15 +0.3 6,211,886 - QEN71_RS27940 0.15 -1.8 6,211,898 - QEN71_RS27940 0.16 +0.3 6,212,111 - QEN71_RS27940 0.35 -0.1 6,212,111 - QEN71_RS27940 0.35 -0.9 6,212,111 - QEN71_RS27940 0.35 -1.6 6,212,111 - QEN71_RS27940 0.35 -1.7 6,212,111 - QEN71_RS27940 0.35 -0.9 6,212,111 - QEN71_RS27940 0.35 -0.5 6,212,111 - QEN71_RS27940 0.35 -0.7 6,212,111 - QEN71_RS27940 0.35 -0.4 6,212,111 - QEN71_RS27940 0.35 -0.2 6,212,111 - QEN71_RS27940 0.35 +2.1 6,212,111 - QEN71_RS27940 0.35 -2.1 6,212,111 - QEN71_RS27940 0.35 -0.1 6,212,138 - QEN71_RS27940 0.37 +0.3 6,212,138 - QEN71_RS27940 0.37 -0.6 6,212,138 - QEN71_RS27940 0.37 +1.3 6,212,138 - QEN71_RS27940 0.37 +1.4 6,212,138 - QEN71_RS27940 0.37 +0.6 6,212,138 - QEN71_RS27940 0.37 -1.2 6,212,138 - QEN71_RS27940 0.37 -2.4 6,212,138 - QEN71_RS27940 0.37 -1.9 6,212,399 - QEN71_RS27940 0.60 -0.7 6,212,948 - +1.7 6,212,948 - -0.4 6,212,948 - +0.1 6,212,948 - +0.7 6,212,948 - -0.3 6,212,948 - +0.8 6,212,948 - -1.6 6,212,948 - +0.6 6,212,977 - -1.3 6,212,977 - -0.2 6,213,002 - +0.3 6,213,099 - -1.8 6,213,099 - +0.6 6,213,099 - +1.0 6,213,099 - +1.5 6,213,099 - -1.1 6,213,099 - +2.1 6,213,099 - +0.6 6,213,125 - +0.8 6,213,125 - +0.3 6,213,128 - -0.9 6,213,213 - +0.8 6,213,213 - -0.2 6,213,220 - -0.1 6,213,220 - +0.2 6,213,220 - +0.4 6,213,220 - +0.8 6,213,220 - -0.3 6,213,245 + -0.2 6,213,245 + -0.7 6,213,378 + -1.4 6,213,379 - -0.6 6,213,379 - +1.4 6,213,379 - -0.7 6,213,379 - +0.3 6,213,394 + -0.9 6,213,394 + -1.6 6,213,395 - +0.2 6,213,395 - +0.4 6,213,395 - +0.3 6,213,395 - -1.1 6,213,395 - -0.4 6,213,405 + +0.3 6,213,405 + -0.6 6,213,405 + -0.8 6,213,405 + +0.4 6,213,405 + +1.1 6,213,405 + +1.5 6,213,405 + +1.1 6,213,406 - +0.1 6,213,494 + -0.7 6,213,494 + -1.9 6,213,494 + -0.5 6,213,495 - -2.5 6,213,495 - -0.3 6,213,495 - -0.6 6,213,508 + +0.9 6,213,508 + +0.9 6,213,508 + +0.3 6,213,508 + +1.0 6,213,508 + +0.2 6,213,508 + -0.1 6,213,508 + +0.9 6,213,508 + -0.7 6,213,508 + -0.1 6,213,509 - -1.0 6,213,509 - -1.7 6,213,509 - -2.4 6,213,509 - -4.0 6,213,509 - -1.3 6,213,509 - -3.5 6,213,538 + -1.3 6,213,566 + -4.4 6,213,567 - -1.8 6,213,567 - -1.3 6,213,698 + QEN71_RS27945 0.11 +0.4 6,213,698 + QEN71_RS27945 0.11 -1.4 6,213,698 + QEN71_RS27945 0.11 -1.8 6,213,698 + QEN71_RS27945 0.11 -1.2 6,213,698 + QEN71_RS27945 0.11 -2.6 6,213,699 - QEN71_RS27945 0.11 -3.1 6,213,699 - QEN71_RS27945 0.11 -0.7 6,213,699 - QEN71_RS27945 0.11 -1.1 6,213,699 - QEN71_RS27945 0.11 -4.0 6,213,699 - QEN71_RS27945 0.11 -1.8 6,213,699 - QEN71_RS27945 0.11 -0.6 6,213,699 - QEN71_RS27945 0.11 -1.5 6,213,699 - QEN71_RS27945 0.11 -1.1 6,213,699 - QEN71_RS27945 0.11 -2.7 6,213,699 - QEN71_RS27945 0.11 -3.3 6,213,699 - QEN71_RS27945 0.11 -2.1 6,213,699 - QEN71_RS27945 0.11 -0.7 6,213,699 - QEN71_RS27945 0.11 -1.4 6,213,699 - QEN71_RS27945 0.11 -0.9 6,213,704 + QEN71_RS27945 0.11 -1.4 6,213,704 + QEN71_RS27945 0.11 -1.6 6,213,704 + QEN71_RS27945 0.11 -1.1 6,213,704 + QEN71_RS27945 0.11 -0.7 6,213,705 - QEN71_RS27945 0.11 -2.2 6,213,705 - QEN71_RS27945 0.11 -2.7 6,213,705 - QEN71_RS27945 0.11 -2.3 6,213,782 + QEN71_RS27945 0.16 -1.0 6,213,782 + QEN71_RS27945 0.16 -0.3 6,213,782 + QEN71_RS27945 0.16 +0.6 6,213,782 + QEN71_RS27945 0.16 -1.9 6,213,782 + QEN71_RS27945 0.16 -1.5 6,213,782 + QEN71_RS27945 0.16 -2.7 6,213,782 + QEN71_RS27945 0.16 -0.5 6,213,782 + QEN71_RS27945 0.16 -1.9 6,213,782 + QEN71_RS27945 0.16 -1.8 6,213,782 + QEN71_RS27945 0.16 -1.1 6,213,782 + QEN71_RS27945 0.16 -2.3 6,213,783 - QEN71_RS27945 0.16 -0.8 6,213,783 - QEN71_RS27945 0.16 -2.4 6,213,783 - QEN71_RS27945 0.16 -1.0 6,213,783 - QEN71_RS27945 0.16 -2.3 6,213,783 - QEN71_RS27945 0.16 -2.3 6,213,783 - QEN71_RS27945 0.16 +0.1 6,213,783 - QEN71_RS27945 0.16 -1.3 6,213,783 - QEN71_RS27945 0.16 -1.7 6,213,833 + QEN71_RS27945 0.19 -1.0
Or see this region's nucleotide sequence