Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS15270

Experiment: biofilm; Day2; NLDM; Manganese (II) chloride tetrahydrate 10mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	biofilm; Day2; NLDM; Manganese (II) chloride tetrahydrate 10mM
3,327,895	+		LRK53_RS15255	0.62	-0.1
3,327,895	+		LRK53_RS15255	0.62	+1.9
3,327,895	+		LRK53_RS15255	0.62	-2.1
3,328,132	-		LRK53_RS15255	0.84	-0.8
3,328,193	+				-0.1
3,328,297	-				-0.9
3,328,297	-				-1.3
3,328,339	+				-0.9
3,328,339	+				-1.4
3,328,339	+				-0.6
3,328,339	+				-1.1
3,328,339	+				-1.1
3,328,339	+				+1.0
3,328,339	+				-0.7
3,328,339	+				-1.9
3,328,339	+				-0.4
3,328,339	+				+0.3
3,328,339	+				-0.2
3,328,339	+				-1.8
3,328,339	+				-0.6
3,328,339	+				+0.6
3,328,339	+				-2.4
3,328,339	+				+0.2
3,328,339	+				-1.0
3,328,339	+				-0.1
3,328,339	+				-1.6
3,328,339	+				-2.7
3,328,339	+				-0.5
3,328,339	+				-2.1
3,328,340	-				+0.0
3,328,340	-				-0.6
3,328,340	-				-0.3
3,328,340	-				-0.4
3,328,340	-				-1.1
3,328,340	-				-0.9
3,328,340	-				-1.2
3,328,340	-				-0.4
3,328,340	-				+2.7
3,328,340	-				-0.8
3,328,340	-				-0.2
3,328,340	-				-0.1
3,328,340	-				-2.0
3,328,340	-				+0.2
3,328,340	-				-0.0
3,328,340	-				+0.1
3,328,340	-				-2.5
3,328,340	-				+1.7
3,328,340	-				-0.8
3,328,340	-				-1.4
3,328,340	-				-1.4
3,328,340	-				-1.2
3,328,340	-				-1.4
3,328,340	-				-2.6
3,328,352	+				-0.9
3,328,352	+				-0.3
3,328,352	+				-2.7
3,328,352	+				-2.8
3,328,352	+				+2.6
3,328,353	-				-0.4
3,328,367	+				+3.1
3,328,367	+				-1.6
3,328,407	+				-0.9
3,328,407	+				+0.2
3,328,408	-				-0.5
3,328,408	-				-2.5
3,328,489	+		LRK53_RS15260	0.32	-0.7
3,328,489	+		LRK53_RS15260	0.32	+0.1
3,328,489	+		LRK53_RS15260	0.32	-2.2
3,328,489	+		LRK53_RS15260	0.32	-2.1
3,328,489	+		LRK53_RS15260	0.32	-0.1
3,328,489	+		LRK53_RS15260	0.32	-1.8
3,328,489	+		LRK53_RS15260	0.32	-0.3
3,328,489	+		LRK53_RS15260	0.32	-0.1
3,328,489	+		LRK53_RS15260	0.32	-0.8
3,328,489	+		LRK53_RS15260	0.32	-1.2
3,328,489	+		LRK53_RS15260	0.32	-2.5
3,328,490	-		LRK53_RS15260	0.33	-1.7
3,328,490	-		LRK53_RS15260	0.33	-2.6
3,328,490	-		LRK53_RS15260	0.33	-0.4
3,328,490	-		LRK53_RS15260	0.33	-2.8
3,328,490	-		LRK53_RS15260	0.33	+0.2
3,328,490	-		LRK53_RS15260	0.33	-1.6
3,328,555	+		LRK53_RS15260	0.56	-1.9
3,328,555	+		LRK53_RS15260	0.56	-1.4
3,328,556	-		LRK53_RS15260	0.56	-1.4
3,328,556	-		LRK53_RS15260	0.56	-2.2
3,328,591	+		LRK53_RS15260	0.69	+0.7
3,328,591	+		LRK53_RS15260	0.69	-0.5
3,328,591	+		LRK53_RS15260	0.69	-1.1
3,328,591	+		LRK53_RS15260	0.69	-0.1
3,328,591	+		LRK53_RS15260	0.69	+0.3
3,328,591	+		LRK53_RS15260	0.69	-0.5
3,328,591	+		LRK53_RS15260	0.69	+0.5
3,328,591	+		LRK53_RS15260	0.69	-2.8
3,328,591	+		LRK53_RS15260	0.69	-0.6
3,328,591	+		LRK53_RS15260	0.69	-1.0
3,328,592	-		LRK53_RS15260	0.69	-0.7
3,328,592	-		LRK53_RS15260	0.69	-0.3
3,328,838	+				-1.6
3,328,838	+				+0.1
3,328,838	+				-1.4
3,328,838	+				+0.2
3,328,838	+				-1.1
3,328,838	+				-0.1
3,328,838	+				-0.8
3,328,838	+				-0.1
3,328,838	+				+0.1
3,328,838	+				+0.4
3,328,838	+				-2.8
3,328,838	+				+2.7
3,328,838	+				+0.5
3,328,839	-				-1.3
3,328,839	-				-1.5
3,328,839	-				-0.4
3,328,839	-				-2.0
3,328,839	-				-0.7
3,328,839	-				-0.1
3,328,839	-				-0.1
3,328,839	-				-0.9
3,328,839	-				-1.7
3,328,839	-				-1.6
3,328,839	-				-0.7
3,328,839	-				+0.3
3,328,888	+				-1.2
3,328,888	+				-1.0
3,328,888	+				-1.5
3,328,888	+				+0.5
3,328,888	+				-0.7
3,328,888	+				-0.6
3,328,888	+				+0.8
3,328,888	+				-3.0
3,328,888	+				+0.6
3,328,888	+				-0.6
3,328,888	+				+0.2
3,328,888	+				-2.0
3,328,888	+				+0.1
3,328,888	+				-3.4
3,328,888	+				-1.8
3,328,888	+				-4.2
3,328,888	+				-1.4
3,328,888	+				-2.9
3,328,889	-				-0.8
3,328,889	-				-0.3
3,328,889	-				-3.0
3,328,889	-				-1.0
3,328,889	-				-0.8
3,328,889	-				-0.7
3,328,889	-				-0.1
3,328,889	-				-0.4
3,328,889	-				-0.8
3,328,889	-				-2.4
3,328,889	-				-1.4
3,328,889	-				-0.0
3,328,889	-				-1.7
3,329,137	+		LRK53_RS15270	0.38	-0.9
3,329,137	+		LRK53_RS15270	0.38	-0.3
3,329,137	+		LRK53_RS15270	0.38	-1.1
3,329,137	+		LRK53_RS15270	0.38	-1.2
3,329,137	+		LRK53_RS15270	0.38	+0.6
3,329,137	+		LRK53_RS15270	0.38	-2.0
3,329,137	+		LRK53_RS15270	0.38	-1.2
3,329,137	+		LRK53_RS15270	0.38	+0.6
3,329,137	+		LRK53_RS15270	0.38	-0.9
3,329,137	+		LRK53_RS15270	0.38	-1.6
3,329,137	+		LRK53_RS15270	0.38	-0.6
3,329,137	+		LRK53_RS15270	0.38	-2.1
3,329,137	+		LRK53_RS15270	0.38	+0.2
3,329,137	+		LRK53_RS15270	0.38	-0.6
3,329,137	+		LRK53_RS15270	0.38	-0.9
3,329,137	+		LRK53_RS15270	0.38	-0.9
3,329,137	+		LRK53_RS15270	0.38	+0.6
3,329,137	+		LRK53_RS15270	0.38	-0.9
3,329,137	+		LRK53_RS15270	0.38	-2.4
3,329,137	+		LRK53_RS15270	0.38	+0.2
3,329,137	+		LRK53_RS15270	0.38	-1.4
3,329,137	+		LRK53_RS15270	0.38	+0.1
3,329,137	+		LRK53_RS15270	0.38	-2.2
3,329,137	+		LRK53_RS15270	0.38	-0.9
3,329,137	+		LRK53_RS15270	0.38	-1.9
3,329,137	+		LRK53_RS15270	0.38	-0.6
3,329,137	+		LRK53_RS15270	0.38	-0.3
3,329,137	+		LRK53_RS15270	0.38	-2.3
3,329,137	+		LRK53_RS15270	0.38	-1.7
3,329,137	+		LRK53_RS15270	0.38	+0.4
3,329,137	+		LRK53_RS15270	0.38	-0.3
3,329,138	-		LRK53_RS15270	0.38	-0.6
3,329,138	-		LRK53_RS15270	0.38	-2.4
3,329,138	-		LRK53_RS15270	0.38	-0.1
3,329,138	-		LRK53_RS15270	0.38	+0.6
3,329,138	-		LRK53_RS15270	0.38	-0.6
3,329,138	-		LRK53_RS15270	0.38	-1.8
3,329,138	-		LRK53_RS15270	0.38	-0.6
3,329,138	-		LRK53_RS15270	0.38	-0.8
3,329,138	-		LRK53_RS15270	0.38	-0.1
3,329,138	-		LRK53_RS15270	0.38	-2.6
3,329,138	-		LRK53_RS15270	0.38	-1.0
3,329,138	-		LRK53_RS15270	0.38	-1.7
3,329,138	-		LRK53_RS15270	0.38	-0.8
3,329,138	-		LRK53_RS15270	0.38	+0.9
3,329,138	-		LRK53_RS15270	0.38	-0.7
3,329,138	-		LRK53_RS15270	0.38	-1.3
3,329,138	-		LRK53_RS15270	0.38	-0.3
3,329,138	-		LRK53_RS15270	0.38	-0.7
3,329,138	-		LRK53_RS15270	0.38	-0.7
3,329,138	-		LRK53_RS15270	0.38	-2.4
3,329,138	-		LRK53_RS15270	0.38	-1.3
3,329,138	-		LRK53_RS15270	0.38	-0.3
3,329,138	-		LRK53_RS15270	0.38	-0.9
3,329,138	-		LRK53_RS15270	0.38	+0.4
3,329,138	-		LRK53_RS15270	0.38	-0.9
3,329,138	-		LRK53_RS15270	0.38	-1.2
3,329,138	-		LRK53_RS15270	0.38	-0.6
3,329,138	-		LRK53_RS15270	0.38	-2.0
3,329,138	-		LRK53_RS15270	0.38	+0.8
3,329,138	-		LRK53_RS15270	0.38	-1.1
3,329,138	-		LRK53_RS15270	0.38	-1.5
3,329,138	-		LRK53_RS15270	0.38	+0.5
3,329,138	-		LRK53_RS15270	0.38	-0.6
3,329,138	-		LRK53_RS15270	0.38	-0.9
3,329,138	-		LRK53_RS15270	0.38	-0.0
3,329,138	-		LRK53_RS15270	0.38	-0.4
3,329,138	-		LRK53_RS15270	0.38	+0.1
3,329,138	-		LRK53_RS15270	0.38	+1.7
3,329,138	-		LRK53_RS15270	0.38	-0.2
3,329,138	-		LRK53_RS15270	0.38	+0.0
3,329,239	+		LRK53_RS15270	0.52	+0.7
3,329,239	+		LRK53_RS15270	0.52	-0.1
3,329,239	+		LRK53_RS15270	0.52	-0.7
3,329,239	+		LRK53_RS15270	0.52	-1.3
3,329,239	+		LRK53_RS15270	0.52	-2.1
3,329,239	+		LRK53_RS15270	0.52	-1.4
3,329,239	+		LRK53_RS15270	0.52	-0.3
3,329,239	+		LRK53_RS15270	0.52	+0.9
3,329,239	+		LRK53_RS15270	0.52	-2.9
3,329,239	+		LRK53_RS15270	0.52	-0.2
3,329,239	+		LRK53_RS15270	0.52	-1.6
3,329,239	+		LRK53_RS15270	0.52	-1.6
3,329,239	+		LRK53_RS15270	0.52	-0.3
3,329,239	+		LRK53_RS15270	0.52	-0.3
3,329,239	+		LRK53_RS15270	0.52	+0.4
3,329,239	+		LRK53_RS15270	0.52	-0.8
3,329,239	+		LRK53_RS15270	0.52	-2.1
3,329,239	+		LRK53_RS15270	0.52	-3.5
3,329,239	+		LRK53_RS15270	0.52	-2.3
3,329,239	+		LRK53_RS15270	0.52	+0.2
3,329,240	-		LRK53_RS15270	0.52	-1.6
3,329,240	-		LRK53_RS15270	0.52	-2.4
3,329,240	-		LRK53_RS15270	0.52	-0.0
3,329,240	-		LRK53_RS15270	0.52	-2.1
3,329,240	-		LRK53_RS15270	0.52	-0.4
3,329,240	-		LRK53_RS15270	0.52	+1.8
3,329,240	-		LRK53_RS15270	0.52	-1.4
3,329,240	-		LRK53_RS15270	0.52	-1.4
3,329,240	-		LRK53_RS15270	0.52	-0.1
3,329,240	-		LRK53_RS15270	0.52	-3.0
3,329,240	-		LRK53_RS15270	0.52	+0.0
3,329,240	-		LRK53_RS15270	0.52	-0.9
3,329,240	-		LRK53_RS15270	0.52	+0.4
3,329,240	-		LRK53_RS15270	0.52	-0.9
3,329,240	-		LRK53_RS15270	0.52	-1.9
3,329,240	-		LRK53_RS15270	0.52	-0.5
3,329,240	-		LRK53_RS15270	0.52	-1.1
3,329,240	-		LRK53_RS15270	0.52	-0.9
3,329,240	-		LRK53_RS15270	0.52	-1.8
3,329,240	-		LRK53_RS15270	0.52	-2.2
3,329,240	-		LRK53_RS15270	0.52	+0.6
3,329,240	-		LRK53_RS15270	0.52	+1.0
3,329,240	-		LRK53_RS15270	0.52	-1.4
3,329,240	-		LRK53_RS15270	0.52	-3.2
3,329,240	-		LRK53_RS15270	0.52	-1.7
3,329,240	-		LRK53_RS15270	0.52	-0.7
3,329,240	-		LRK53_RS15270	0.52	-0.6
3,329,240	-		LRK53_RS15270	0.52	-0.1
3,329,240	-		LRK53_RS15270	0.52	-1.7
3,329,240	-		LRK53_RS15270	0.52	-0.5
3,329,240	-		LRK53_RS15270	0.52	-0.2
3,329,240	-		LRK53_RS15270	0.52	-1.9
3,329,240	-		LRK53_RS15270	0.52	-3.3
3,329,240	-		LRK53_RS15270	0.52	-0.2
3,329,240	-		LRK53_RS15270	0.52	-1.1
3,329,240	-		LRK53_RS15270	0.52	-0.4
3,329,240	-		LRK53_RS15270	0.52	-3.3
3,329,240	-		LRK53_RS15270	0.52	-1.2
3,329,240	-		LRK53_RS15270	0.52	-0.9
3,329,240	-		LRK53_RS15270	0.52	-3.1
3,329,240	-		LRK53_RS15270	0.52	-0.7
3,329,240	-		LRK53_RS15270	0.52	-2.0
3,329,240	-		LRK53_RS15270	0.52	-1.1
3,329,240	-		LRK53_RS15270	0.52	-1.1
3,329,241	+		LRK53_RS15270	0.52	-2.0
3,329,241	+		LRK53_RS15270	0.52	-0.8
3,329,241	+		LRK53_RS15270	0.52	-0.6
3,329,241	+		LRK53_RS15270	0.52	-0.8
3,329,241	+		LRK53_RS15270	0.52	+1.2
3,329,311	+		LRK53_RS15270	0.62	-1.1
3,329,311	+		LRK53_RS15270	0.62	+1.0
3,329,311	+		LRK53_RS15270	0.62	+2.2
3,329,311	+		LRK53_RS15270	0.62	+0.2
3,329,311	+		LRK53_RS15270	0.62	-0.7
3,329,311	+		LRK53_RS15270	0.62	-0.1
3,329,311	+		LRK53_RS15270	0.62	-2.3
3,329,311	+		LRK53_RS15270	0.62	-1.6
3,329,312	-		LRK53_RS15270	0.62	-1.2
3,329,312	-		LRK53_RS15270	0.62	-1.0
3,329,312	-		LRK53_RS15270	0.62	-0.3
3,329,312	-		LRK53_RS15270	0.62	-0.4
3,329,312	-		LRK53_RS15270	0.62	+0.2
3,329,312	-		LRK53_RS15270	0.62	+0.0
3,329,355	+		LRK53_RS15270	0.68	-0.6
3,329,355	+		LRK53_RS15270	0.68	+0.2
3,329,356	-		LRK53_RS15270	0.68	-0.3
3,329,356	-		LRK53_RS15270	0.68	-0.6
3,329,483	+		LRK53_RS15270	0.86	-3.1
3,329,483	+		LRK53_RS15270	0.86	-0.6
3,329,495	+		LRK53_RS15270	0.87	-0.9
3,329,495	+		LRK53_RS15270	0.87	-0.1
3,329,495	+		LRK53_RS15270	0.87	-1.2
3,329,495	+		LRK53_RS15270	0.87	+0.7
3,329,496	-		LRK53_RS15270	0.88	-2.1
3,329,496	-		LRK53_RS15270	0.88	-0.4
3,329,496	-		LRK53_RS15270	0.88	-0.8
3,329,496	-		LRK53_RS15270	0.88	-3.9
3,329,496	-		LRK53_RS15270	0.88	-1.4
3,329,496	-		LRK53_RS15270	0.88	+0.4
3,329,694	+				-0.9
3,329,694	+				-0.4
3,329,694	+				-0.6
3,329,695	-				-0.1
3,329,695	-				+1.7
3,329,695	-				-0.1
3,329,695	-				-1.1
3,329,695	-				-1.3
3,329,695	-				-0.5
3,329,695	-				-1.6
3,329,695	-				+1.9
3,329,834	+				-0.8
3,329,834	+				-1.4
3,329,834	+				+0.2
3,329,834	+				-0.3
3,329,835	-				-2.2
3,329,835	-				+0.7
3,329,835	-				+0.6
3,329,953	+				-1.6
3,329,953	+				-2.3
3,329,953	+				-1.1
3,329,954	-				-2.0
3,329,954	-				+0.4
3,329,954	-				-0.1
3,329,954	-				-0.9
3,330,013	+				-1.0
3,330,013	+				-1.9
3,330,013	+				+0.4
3,330,013	+				-0.4
3,330,013	+				+0.2
3,330,013	+				+0.3
3,330,014	-				-1.4
3,330,014	-				-0.1
3,330,014	-				+0.9
3,330,014	-				-1.8
3,330,014	-				-0.9
3,330,096	+				-1.6
3,330,096	+				+0.6
3,330,096	+				-1.1
3,330,128	-				-0.6
3,330,224	+				-2.4
3,330,224	+				-1.2
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