Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS14490

Experiment: biofilm; Day2; NLDM; Manganese (II) chloride tetrahydrate 10mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	biofilm; Day2; NLDM; Manganese (II) chloride tetrahydrate 10mM
3,173,618	+		LRK53_RS14485	0.84	+0.6
3,173,618	+		LRK53_RS14485	0.84	+1.4
3,173,618	+		LRK53_RS14485	0.84	-0.5
3,173,618	+		LRK53_RS14485	0.84	-0.6
3,173,619	-		LRK53_RS14485	0.84	+1.6
3,173,627	+		LRK53_RS14485	0.84	+0.4
3,173,627	+		LRK53_RS14485	0.84	-0.9
3,173,627	+		LRK53_RS14485	0.84	-0.7
3,173,627	+		LRK53_RS14485	0.84	+1.8
3,173,627	+		LRK53_RS14485	0.84	-0.3
3,173,628	-		LRK53_RS14485	0.84	-0.1
3,173,628	-		LRK53_RS14485	0.84	-0.0
3,173,628	-		LRK53_RS14485	0.84	-0.9
3,173,628	-		LRK53_RS14485	0.84	+0.4
3,173,628	-		LRK53_RS14485	0.84	-1.6
3,173,752	+				-2.2
3,173,752	+				-1.0
3,173,752	+				-1.2
3,173,752	+				-0.4
3,173,752	+				-1.3
3,173,753	-				+0.3
3,173,753	-				-2.2
3,173,753	-				-1.5
3,173,753	-				+0.2
3,173,753	-				-1.1
3,173,753	-				-2.1
3,173,753	-				-0.2
3,173,753	-				-0.4
3,173,791	+				-0.8
3,173,791	+				-0.3
3,173,791	+				+0.1
3,173,791	+				+1.1
3,173,792	-				-0.4
3,173,792	-				-0.2
3,173,836	+				+1.2
3,173,836	+				+1.3
3,173,836	+				+0.4
3,173,837	-				-1.8
3,173,911	+				-0.7
3,173,911	+				+0.3
3,173,912	-				+0.1
3,173,912	-				-1.6
3,173,941	+				-0.6
3,173,941	+				-2.4
3,173,941	+				-0.6
3,173,941	+				-1.6
3,173,941	+				-1.2
3,173,941	+				-0.8
3,173,941	+				-0.3
3,173,941	+				-1.9
3,173,941	+				-2.4
3,173,941	+				+0.7
3,173,941	+				+0.4
3,173,941	+				-2.5
3,173,941	+				+0.0
3,173,941	+				+0.1
3,173,942	-				-0.8
3,173,942	-				-0.6
3,173,942	-				-0.2
3,173,942	-				+0.0
3,173,942	-				-3.8
3,173,942	-				-0.2
3,173,942	-				-0.9
3,173,942	-				+0.0
3,173,942	-				-2.7
3,173,942	-				+0.7
3,173,942	-				+0.5
3,173,942	-				-2.2
3,173,942	-				-1.1
3,174,040	+				+0.8
3,174,205	-				-1.1
3,174,285	+				+1.4
3,174,285	+				-0.1
3,174,285	+				+0.2
3,174,285	+				-0.4
3,174,285	+				+0.1
3,174,285	+				-1.2
3,174,285	+				+0.7
3,174,285	+				-2.2
3,174,285	+				-1.0
3,174,285	+				-0.6
3,174,285	+				-1.2
3,174,285	+				-0.2
3,174,285	+				+0.8
3,174,285	+				-0.4
3,174,286	-				-0.4
3,174,286	-				+1.0
3,174,286	-				+1.8
3,174,286	-				-0.2
3,174,286	-				-2.8
3,174,286	-				+0.3
3,174,286	-				+1.0
3,174,286	-				-1.7
3,174,286	-				-2.5
3,174,286	-				-1.3
3,174,286	-				-1.7
3,174,286	-				-1.5
3,174,288	+				-0.3
3,174,288	+				-1.6
3,174,288	+				-1.8
3,174,288	+				+0.1
3,174,288	+				-0.4
3,174,288	+				+0.1
3,174,288	+				-0.8
3,174,288	+				-1.3
3,174,289	-				+0.0
3,174,289	-				+0.4
3,174,289	-				-0.9
3,174,289	-				-0.8
3,174,289	-				-0.4
3,174,343	+				-0.7
3,174,344	-				-0.7
3,174,470	+		LRK53_RS14490	0.36	-0.2
3,174,470	+		LRK53_RS14490	0.36	-0.5
3,174,471	-		LRK53_RS14490	0.37	-0.8
3,174,503	+		LRK53_RS14490	0.49	+0.2
3,174,503	+		LRK53_RS14490	0.49	-1.4
3,174,503	+		LRK53_RS14490	0.49	+0.6
3,174,503	+		LRK53_RS14490	0.49	+0.0
3,174,503	+		LRK53_RS14490	0.49	+1.3
3,174,504	-		LRK53_RS14490	0.50	-2.0
3,174,504	-		LRK53_RS14490	0.50	-1.3
3,174,533	+		LRK53_RS14490	0.61	-2.7
3,174,533	+		LRK53_RS14490	0.61	-0.9
3,174,533	+		LRK53_RS14490	0.61	-0.5
3,174,533	+		LRK53_RS14490	0.61	-1.1
3,174,533	+		LRK53_RS14490	0.61	-0.1
3,174,533	+		LRK53_RS14490	0.61	-1.5
3,174,533	+		LRK53_RS14490	0.61	-1.0
3,174,533	+		LRK53_RS14490	0.61	-1.9
3,174,533	+		LRK53_RS14490	0.61	-2.1
3,174,533	+		LRK53_RS14490	0.61	-0.3
3,174,533	+		LRK53_RS14490	0.61	-0.4
3,174,533	+		LRK53_RS14490	0.61	+0.8
3,174,533	+		LRK53_RS14490	0.61	+1.0
3,174,533	+		LRK53_RS14490	0.61	-1.8
3,174,533	+		LRK53_RS14490	0.61	+0.2
3,174,533	+		LRK53_RS14490	0.61	-2.2
3,174,533	+		LRK53_RS14490	0.61	-1.3
3,174,534	-		LRK53_RS14490	0.62	-0.8
3,174,534	-		LRK53_RS14490	0.62	-2.5
3,174,534	-		LRK53_RS14490	0.62	-0.8
3,174,534	-		LRK53_RS14490	0.62	-2.8
3,174,534	-		LRK53_RS14490	0.62	-1.2
3,174,534	-		LRK53_RS14490	0.62	-3.6
3,174,534	-		LRK53_RS14490	0.62	-1.2
3,174,534	-		LRK53_RS14490	0.62	-1.3
3,174,534	-		LRK53_RS14490	0.62	-2.9
3,174,534	-		LRK53_RS14490	0.62	+0.9
3,174,534	-		LRK53_RS14490	0.62	-2.2
3,174,534	-		LRK53_RS14490	0.62	+0.6
3,174,534	-		LRK53_RS14490	0.62	-0.2
3,174,534	-		LRK53_RS14490	0.62	-1.9
3,174,534	-		LRK53_RS14490	0.62	+0.7
3,174,534	-		LRK53_RS14490	0.62	-0.1
3,174,534	-		LRK53_RS14490	0.62	-1.3
3,174,542	+		LRK53_RS14490	0.65	-3.3
3,174,542	+		LRK53_RS14490	0.65	-0.6
3,174,542	+		LRK53_RS14490	0.65	+0.3
3,174,542	+		LRK53_RS14490	0.65	-1.9
3,174,542	+		LRK53_RS14490	0.65	-0.3
3,174,542	+		LRK53_RS14490	0.65	-1.4
3,174,542	+		LRK53_RS14490	0.65	-2.9
3,174,542	+		LRK53_RS14490	0.65	-0.9
3,174,542	+		LRK53_RS14490	0.65	-0.8
3,174,542	+		LRK53_RS14490	0.65	-0.5
3,174,543	-		LRK53_RS14490	0.65	-0.1
3,174,543	-		LRK53_RS14490	0.65	-0.7
3,174,543	-		LRK53_RS14490	0.65	-1.3
3,174,543	-		LRK53_RS14490	0.65	+1.3
3,174,543	-		LRK53_RS14490	0.65	-3.7
3,174,543	-		LRK53_RS14490	0.65	-1.5
3,174,543	-		LRK53_RS14490	0.65	+0.6
3,174,645	+				-0.8
3,174,646	-				+0.0
3,174,784	+		LRK53_RS14495	0.11	+2.0
3,174,785	-		LRK53_RS14495	0.11	-0.9
3,174,785	-		LRK53_RS14495	0.11	-1.6
3,174,820	+		LRK53_RS14495	0.15	-0.9
3,174,820	+		LRK53_RS14495	0.15	-2.7
3,174,820	+		LRK53_RS14495	0.15	-1.7
3,174,820	+		LRK53_RS14495	0.15	-0.5
3,174,820	+		LRK53_RS14495	0.15	+0.4
3,174,821	-		LRK53_RS14495	0.15	-0.4
3,174,821	-		LRK53_RS14495	0.15	+2.5
3,174,821	-		LRK53_RS14495	0.15	-2.4
3,174,821	-		LRK53_RS14495	0.15	+0.7
3,174,821	-		LRK53_RS14495	0.15	-0.6
3,174,821	-		LRK53_RS14495	0.15	-1.2
3,174,863	-		LRK53_RS14495	0.20	-1.4
3,174,863	-		LRK53_RS14495	0.20	-0.8
3,174,889	+		LRK53_RS14495	0.23	-1.4
3,174,889	+		LRK53_RS14495	0.23	-1.2
3,174,889	+		LRK53_RS14495	0.23	-0.2
3,174,889	+		LRK53_RS14495	0.23	-0.5
3,174,889	+		LRK53_RS14495	0.23	-0.2
3,174,890	-		LRK53_RS14495	0.23	-1.1
3,174,890	-		LRK53_RS14495	0.23	-1.8
3,174,890	-		LRK53_RS14495	0.23	-0.9
3,174,890	-		LRK53_RS14495	0.23	-1.1
3,174,890	-		LRK53_RS14495	0.23	-3.1
3,175,024	+		LRK53_RS14495	0.38	-2.5
3,175,025	-		LRK53_RS14495	0.38	-0.6
3,175,025	-		LRK53_RS14495	0.38	+0.0
3,175,025	-		LRK53_RS14495	0.38	-0.4
3,175,135	+		LRK53_RS14495	0.50	-0.1
3,175,136	-		LRK53_RS14495	0.50	-1.6
3,175,144	+		LRK53_RS14495	0.51	-1.0
3,175,144	+		LRK53_RS14495	0.51	-0.7
3,175,144	+		LRK53_RS14495	0.51	-3.3
3,175,144	+		LRK53_RS14495	0.51	-1.5
3,175,145	-		LRK53_RS14495	0.51	+1.0
3,175,145	-		LRK53_RS14495	0.51	-0.7
3,175,145	-		LRK53_RS14495	0.51	-0.6
3,175,161	+		LRK53_RS14495	0.53	-1.9
3,175,390	+		LRK53_RS14495	0.78	+0.1
3,175,390	+		LRK53_RS14495	0.78	+0.6
3,175,390	+		LRK53_RS14495	0.78	-0.1
3,175,390	+		LRK53_RS14495	0.78	-1.4
3,175,390	+		LRK53_RS14495	0.78	+0.2
3,175,390	+		LRK53_RS14495	0.78	-0.9
3,175,390	+		LRK53_RS14495	0.78	-0.7
3,175,390	+		LRK53_RS14495	0.78	+0.0
3,175,390	+		LRK53_RS14495	0.78	-2.1
3,175,390	+		LRK53_RS14495	0.78	+0.0
3,175,390	+		LRK53_RS14495	0.78	-0.2
3,175,390	+		LRK53_RS14495	0.78	+0.5
3,175,390	+		LRK53_RS14495	0.78	-1.8
3,175,390	+		LRK53_RS14495	0.78	-1.1
3,175,390	+		LRK53_RS14495	0.78	-0.3
3,175,391	-		LRK53_RS14495	0.78	-3.0
3,175,391	-		LRK53_RS14495	0.78	-1.2
3,175,391	-		LRK53_RS14495	0.78	-1.0
3,175,391	-		LRK53_RS14495	0.78	+0.2
3,175,391	-		LRK53_RS14495	0.78	+1.1
3,175,444	+		LRK53_RS14495	0.84	-2.3
3,175,444	+		LRK53_RS14495	0.84	-1.6
3,175,445	-		LRK53_RS14495	0.84	-2.3
3,175,445	-		LRK53_RS14495	0.84	-0.4
3,175,516	+				-0.8
3,175,516	+				-0.3
3,175,516	+				-0.4
3,175,561	+				-0.3
3,175,561	+				-2.4
3,175,561	+				+0.9
3,175,562	-				-2.2
3,175,562	-				-0.6
3,175,562	-				-0.7
3,175,562	-				-1.6
3,175,562	-				-0.0
3,175,562	-				+2.2
3,175,562	-				-0.5
3,175,562	-				-0.8