Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS11850

Experiment: biofilm; Day2; NLDM; Manganese (II) chloride tetrahydrate 10mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	biofilm; Day2; NLDM; Manganese (II) chloride tetrahydrate 10mM
2,639,260	+		LRK53_RS11845	0.39	-0.6
2,639,261	-		LRK53_RS11845	0.39	+1.5
2,639,261	-		LRK53_RS11845	0.39	-1.2
2,639,261	-		LRK53_RS11845	0.39	-0.8
2,639,261	-		LRK53_RS11845	0.39	-0.8
2,639,261	-		LRK53_RS11845	0.39	-0.2
2,639,261	-		LRK53_RS11845	0.39	-0.4
2,639,278	+		LRK53_RS11845	0.41	+1.0
2,639,278	+		LRK53_RS11845	0.41	-0.5
2,639,278	+		LRK53_RS11845	0.41	-2.8
2,639,278	+		LRK53_RS11845	0.41	-0.4
2,639,278	+		LRK53_RS11845	0.41	+2.0
2,639,278	+		LRK53_RS11845	0.41	-0.6
2,639,278	+		LRK53_RS11845	0.41	-1.3
2,639,278	+		LRK53_RS11845	0.41	-0.2
2,639,278	+		LRK53_RS11845	0.41	+0.0
2,639,278	+		LRK53_RS11845	0.41	-1.1
2,639,279	-		LRK53_RS11845	0.41	-0.4
2,639,279	-		LRK53_RS11845	0.41	+1.6
2,639,279	-		LRK53_RS11845	0.41	-0.4
2,639,279	-		LRK53_RS11845	0.41	-1.1
2,639,279	-		LRK53_RS11845	0.41	-1.1
2,639,464	+		LRK53_RS11845	0.54	-0.6
2,639,465	-		LRK53_RS11845	0.54	-1.0
2,639,465	-		LRK53_RS11845	0.54	+0.7
2,639,465	-		LRK53_RS11845	0.54	+1.1
2,639,542	+		LRK53_RS11845	0.59	-2.4
2,639,542	+		LRK53_RS11845	0.59	-2.4
2,639,911	+		LRK53_RS11845	0.85	-1.1
2,639,912	-		LRK53_RS11845	0.85	+0.5
2,639,999	+				-1.6
2,639,999	+				-1.6
2,640,000	-				+0.5
2,640,000	-				+0.0
2,640,171	+				-3.3
2,640,171	+				-1.7
2,640,171	+				+0.6
2,640,171	+				-1.2
2,640,171	+				-3.0
2,640,171	+				+1.0
2,640,171	+				-2.3
2,640,172	-				-0.5
2,640,172	-				+0.8
2,640,172	-				-1.2
2,640,172	-				+0.1
2,640,172	-				-1.8
2,640,177	-				+1.7
2,640,293	+				+0.8
2,640,293	+				-0.9
2,640,293	+				-1.4
2,640,293	+				-3.3
2,640,294	-				-0.8
2,640,294	-				-0.1
2,640,294	-				-1.2
2,640,294	-				-0.0
2,640,341	+		LRK53_RS11850	0.19	+0.2
2,640,341	+		LRK53_RS11850	0.19	-1.2
2,640,341	+		LRK53_RS11850	0.19	+0.4
2,640,341	+		LRK53_RS11850	0.19	+0.8
2,640,341	+		LRK53_RS11850	0.19	-0.4
2,640,341	+		LRK53_RS11850	0.19	-0.9
2,640,341	+		LRK53_RS11850	0.19	-0.1
2,640,341	+		LRK53_RS11850	0.19	-0.8
2,640,341	+		LRK53_RS11850	0.19	+0.9
2,640,341	+		LRK53_RS11850	0.19	+0.6
2,640,341	+		LRK53_RS11850	0.19	+0.9
2,640,341	+		LRK53_RS11850	0.19	-0.5
2,640,341	+		LRK53_RS11850	0.19	+0.2
2,640,341	+		LRK53_RS11850	0.19	-2.3
2,640,341	+		LRK53_RS11850	0.19	-1.4
2,640,342	-		LRK53_RS11850	0.19	-2.7
2,640,342	-		LRK53_RS11850	0.19	-0.4
2,640,342	-		LRK53_RS11850	0.19	-2.3
2,640,342	-		LRK53_RS11850	0.19	+1.0
2,640,342	-		LRK53_RS11850	0.19	-1.4
2,640,342	-		LRK53_RS11850	0.19	-0.8
2,640,342	-		LRK53_RS11850	0.19	+0.2
2,640,342	-		LRK53_RS11850	0.19	-1.3
2,640,410	+		LRK53_RS11850	0.33	-1.9
2,640,411	-		LRK53_RS11850	0.33	-0.3
2,640,551	+		LRK53_RS11850	0.61	-0.5
2,640,551	+		LRK53_RS11850	0.61	-0.5
2,640,551	+		LRK53_RS11850	0.61	-0.6
2,640,551	+		LRK53_RS11850	0.61	-0.6
2,640,551	+		LRK53_RS11850	0.61	-0.1
2,640,551	+		LRK53_RS11850	0.61	+2.6
2,640,552	-		LRK53_RS11850	0.62	-1.5
2,640,552	-		LRK53_RS11850	0.62	-0.5
2,640,552	-		LRK53_RS11850	0.62	-0.1
2,640,552	-		LRK53_RS11850	0.62	+1.4
2,640,557	+		LRK53_RS11850	0.63	-0.5
2,640,557	+		LRK53_RS11850	0.63	-0.2
2,640,557	+		LRK53_RS11850	0.63	+0.9
2,640,558	-		LRK53_RS11850	0.63	-0.3
2,640,558	-		LRK53_RS11850	0.63	-0.8
2,640,558	-		LRK53_RS11850	0.63	+0.3
2,640,558	-		LRK53_RS11850	0.63	-3.1
2,640,558	-		LRK53_RS11850	0.63	+0.1
2,640,558	-		LRK53_RS11850	0.63	-0.7
2,640,672	+		LRK53_RS11850	0.86	-1.3
2,640,672	+		LRK53_RS11850	0.86	-0.6
2,640,672	+		LRK53_RS11850	0.86	+0.6
2,640,672	+		LRK53_RS11850	0.86	+0.5
2,640,672	+		LRK53_RS11850	0.86	+1.6
2,640,672	+		LRK53_RS11850	0.86	-1.7
2,640,672	+		LRK53_RS11850	0.86	-0.6
2,640,672	+		LRK53_RS11850	0.86	-1.7
2,640,672	+		LRK53_RS11850	0.86	-1.9
2,640,673	-		LRK53_RS11850	0.86	+0.2
2,640,673	-		LRK53_RS11850	0.86	-1.5
2,640,673	-		LRK53_RS11850	0.86	+0.5
2,640,728	+				-3.0
2,640,728	+				+1.0
2,640,728	+				+0.7
2,640,728	+				+0.5
2,640,728	+				+1.8
2,640,728	+				-0.1
2,640,728	+				-2.6
2,640,728	+				-1.1
2,640,729	-				-2.9
2,640,729	-				-0.1
2,640,729	-				-3.9
2,640,729	-				-1.8
2,640,729	-				+0.1
2,640,740	+				-0.1
2,640,740	+				-0.2
2,640,740	+				-0.9
2,640,740	+				+1.1
2,640,741	-				-0.1
2,640,741	-				-1.1
2,640,805	+				-1.1
2,640,805	+				-2.2
2,640,805	+				+2.3
2,640,806	-				-1.5
2,640,806	-				-0.5
2,640,806	-				+1.6
2,640,806	-				-0.8
2,640,830	+				+0.0
2,640,830	+				-0.0
2,640,831	-				-1.8
2,640,831	-				-1.0
2,640,831	-				-0.5
2,641,254	+		LRK53_RS11855	0.11	-1.1
2,641,254	+		LRK53_RS11855	0.11	+2.4
2,641,254	+		LRK53_RS11855	0.11	-1.4
2,641,254	+		LRK53_RS11855	0.11	+1.2
2,641,254	+		LRK53_RS11855	0.11	-4.0
2,641,254	+		LRK53_RS11855	0.11	-0.7
2,641,254	+		LRK53_RS11855	0.11	-3.4
2,641,254	+		LRK53_RS11855	0.11	-0.4
2,641,255	-		LRK53_RS11855	0.11	-0.8
2,641,255	-		LRK53_RS11855	0.11	-0.8
2,641,255	-		LRK53_RS11855	0.11	+0.7
2,641,279	-		LRK53_RS11855	0.11	+0.3
2,641,364	+		LRK53_RS11855	0.14	+0.4
2,641,364	+		LRK53_RS11855	0.14	-0.9
2,641,364	+		LRK53_RS11855	0.14	-1.8
2,641,364	+		LRK53_RS11855	0.14	+0.0
2,641,364	+		LRK53_RS11855	0.14	-0.2
2,641,364	+		LRK53_RS11855	0.14	+0.6
2,641,365	-		LRK53_RS11855	0.14	-2.4
2,641,365	-		LRK53_RS11855	0.14	-1.6
2,641,365	-		LRK53_RS11855	0.14	-1.9
2,641,365	-		LRK53_RS11855	0.14	-2.9
2,641,365	-		LRK53_RS11855	0.14	-0.6
2,641,365	-		LRK53_RS11855	0.14	+0.2
2,641,698	+		LRK53_RS11855	0.23	-1.5
2,641,699	-		LRK53_RS11855	0.24	-0.7
2,641,699	-		LRK53_RS11855	0.24	-0.6