Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS11770

Experiment: biofilm; Day2; NLDM; Manganese (II) chloride tetrahydrate 10mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	biofilm; Day2; NLDM; Manganese (II) chloride tetrahydrate 10mM
2,621,766	+		LRK53_RS11760	0.78	-0.1
2,621,766	+		LRK53_RS11760	0.78	-0.8
2,621,766	+		LRK53_RS11760	0.78	-0.7
2,621,766	+		LRK53_RS11760	0.78	-1.1
2,621,766	+		LRK53_RS11760	0.78	-0.2
2,621,766	+		LRK53_RS11760	0.78	+0.5
2,621,766	+		LRK53_RS11760	0.78	+1.2
2,621,766	+		LRK53_RS11760	0.78	-0.8
2,621,767	-		LRK53_RS11760	0.78	-1.0
2,621,767	-		LRK53_RS11760	0.78	-1.2
2,621,767	-		LRK53_RS11760	0.78	+0.3
2,621,767	-		LRK53_RS11760	0.78	-0.4
2,621,767	-		LRK53_RS11760	0.78	-1.9
2,621,767	-		LRK53_RS11760	0.78	-0.2
2,621,767	-		LRK53_RS11760	0.78	+0.4
2,621,767	-		LRK53_RS11760	0.78	+0.9
2,621,767	-		LRK53_RS11760	0.78	+0.6
2,621,767	-		LRK53_RS11760	0.78	-1.8
2,621,769	+		LRK53_RS11760	0.78	-2.2
2,621,770	-		LRK53_RS11760	0.78	-2.7
2,621,770	-		LRK53_RS11760	0.78	-0.7
2,621,883	+		LRK53_RS11760	0.88	-2.9
2,621,883	+		LRK53_RS11760	0.88	+0.7
2,621,883	+		LRK53_RS11760	0.88	-1.7
2,621,884	-		LRK53_RS11760	0.88	-0.1
2,621,955	+				-0.4
2,621,955	+				+2.1
2,621,955	+				-0.7
2,621,955	+				+1.2
2,621,955	+				-1.3
2,621,955	+				+0.8
2,621,955	+				-0.1
2,621,955	+				-0.6
2,621,955	+				-0.7
2,621,955	+				-1.3
2,621,955	+				-1.0
2,621,955	+				-2.0
2,621,955	+				-1.2
2,621,955	+				+0.9
2,621,955	+				-1.8
2,621,955	+				-0.6
2,621,956	-				-0.2
2,621,956	-				-1.1
2,621,956	-				+1.9
2,621,956	-				+0.1
2,621,956	-				-1.9
2,621,956	-				+0.1
2,621,956	-				-0.0
2,621,956	-				+1.4
2,621,956	-				-2.3
2,621,956	-				+1.2
2,621,956	-				-0.9
2,621,956	-				-1.2
2,621,956	-				+0.2
2,621,956	-				+0.8
2,621,956	-				+0.3
2,621,956	-				-0.2
2,621,956	-				+0.9
2,621,956	-				-2.7
2,621,956	-				-0.7
2,621,985	+				-0.7
2,621,985	+				-0.1
2,621,986	-				-1.1
2,621,986	-				-0.7
2,621,986	-				-1.1
2,622,140	+		LRK53_RS11765	0.18	-1.5
2,622,140	+		LRK53_RS11765	0.18	-0.4
2,622,140	+		LRK53_RS11765	0.18	-1.4
2,622,140	+		LRK53_RS11765	0.18	-0.5
2,622,140	+		LRK53_RS11765	0.18	-2.1
2,622,140	+		LRK53_RS11765	0.18	-0.7
2,622,141	-		LRK53_RS11765	0.18	-0.5
2,622,141	-		LRK53_RS11765	0.18	-0.7
2,622,141	-		LRK53_RS11765	0.18	-1.3
2,622,141	-		LRK53_RS11765	0.18	-3.5
2,622,141	-		LRK53_RS11765	0.18	-1.3
2,622,141	-		LRK53_RS11765	0.18	-1.1
2,622,141	-		LRK53_RS11765	0.18	-1.2
2,622,141	-		LRK53_RS11765	0.18	-0.4
2,622,380	+		LRK53_RS11765	0.51	+0.2
2,622,380	+		LRK53_RS11765	0.51	+0.4
2,622,380	+		LRK53_RS11765	0.51	-0.4
2,622,380	+		LRK53_RS11765	0.51	-1.6
2,622,380	+		LRK53_RS11765	0.51	-2.5
2,622,380	+		LRK53_RS11765	0.51	-0.1
2,622,381	-		LRK53_RS11765	0.51	+0.2
2,622,381	-		LRK53_RS11765	0.51	-0.5
2,622,381	-		LRK53_RS11765	0.51	-0.9
2,622,381	-		LRK53_RS11765	0.51	-1.7
2,622,381	-		LRK53_RS11765	0.51	-0.3
2,622,455	+		LRK53_RS11765	0.61	-1.8
2,622,455	+		LRK53_RS11765	0.61	-0.8
2,622,455	+		LRK53_RS11765	0.61	+0.3
2,622,455	+		LRK53_RS11765	0.61	-1.2
2,622,455	+		LRK53_RS11765	0.61	-3.6
2,622,455	+		LRK53_RS11765	0.61	-0.2
2,622,455	+		LRK53_RS11765	0.61	+0.9
2,622,455	+		LRK53_RS11765	0.61	-4.0
2,622,455	+		LRK53_RS11765	0.61	-0.3
2,622,456	-		LRK53_RS11765	0.61	+0.1
2,622,456	-		LRK53_RS11765	0.61	-0.8
2,622,790	+				-2.9
2,622,790	+				-0.7
2,622,790	+				-1.0
2,622,790	+				+0.8
2,622,853	+		LRK53_RS11770	0.11	+0.9
2,622,853	+		LRK53_RS11770	0.11	-0.8
2,622,853	+		LRK53_RS11770	0.11	-0.1
2,622,853	+		LRK53_RS11770	0.11	+0.3
2,622,853	+		LRK53_RS11770	0.11	+0.5
2,622,853	+		LRK53_RS11770	0.11	+0.6
2,622,854	-		LRK53_RS11770	0.11	-1.2
2,622,854	-		LRK53_RS11770	0.11	-1.7
2,622,854	-		LRK53_RS11770	0.11	-0.2
2,622,854	-		LRK53_RS11770	0.11	-1.2
2,622,854	-		LRK53_RS11770	0.11	+0.3
2,622,854	-		LRK53_RS11770	0.11	+0.3
2,622,854	-		LRK53_RS11770	0.11	-2.0
2,622,889	+		LRK53_RS11770	0.16	+2.4
2,622,889	+		LRK53_RS11770	0.16	+0.5
2,622,889	+		LRK53_RS11770	0.16	+0.4
2,622,889	+		LRK53_RS11770	0.16	+0.8
2,622,889	+		LRK53_RS11770	0.16	-0.4
2,622,889	+		LRK53_RS11770	0.16	-1.1
2,622,889	+		LRK53_RS11770	0.16	+0.3
2,622,889	+		LRK53_RS11770	0.16	-1.3
2,622,889	+		LRK53_RS11770	0.16	-0.8
2,622,890	-		LRK53_RS11770	0.16	-1.9
2,622,890	-		LRK53_RS11770	0.16	-1.1
2,622,890	-		LRK53_RS11770	0.16	-1.7
2,623,016	-		LRK53_RS11770	0.32	-0.7
2,623,089	+		LRK53_RS11770	0.41	+0.5
2,623,089	+		LRK53_RS11770	0.41	-1.0
2,623,089	+		LRK53_RS11770	0.41	-0.1
2,623,089	+		LRK53_RS11770	0.41	+0.2
2,623,089	+		LRK53_RS11770	0.41	-1.6
2,623,210	+		LRK53_RS11770	0.56	+0.1
2,623,210	+		LRK53_RS11770	0.56	-0.6
2,623,210	+		LRK53_RS11770	0.56	-1.4
2,623,211	-		LRK53_RS11770	0.56	-1.8
2,623,211	-		LRK53_RS11770	0.56	+0.6
2,623,211	-		LRK53_RS11770	0.56	-0.6
2,623,211	-		LRK53_RS11770	0.56	-0.5
2,623,293	+		LRK53_RS11770	0.66	-2.0
2,623,325	+		LRK53_RS11770	0.70	+0.2
2,623,325	+		LRK53_RS11770	0.70	-0.2
2,623,326	-		LRK53_RS11770	0.70	-0.9
2,623,390	+		LRK53_RS11770	0.78	+1.3
2,623,390	+		LRK53_RS11770	0.78	-2.1
2,623,390	+		LRK53_RS11770	0.78	+0.4
2,623,390	+		LRK53_RS11770	0.78	+0.3
2,623,391	-		LRK53_RS11770	0.79	-0.4
2,623,391	-		LRK53_RS11770	0.79	+3.7
2,623,391	-		LRK53_RS11770	0.79	-0.5
2,623,391	-		LRK53_RS11770	0.79	-1.6
2,623,391	-		LRK53_RS11770	0.79	+2.6
2,623,525	+				+0.1
2,623,525	+				-0.4
2,623,525	+				-0.1
2,623,525	+				-1.5
2,623,525	+				-1.4
2,623,526	-				+0.3
2,623,526	-				-3.7
2,623,526	-				-3.7
2,623,526	-				-1.2
2,623,526	-				+0.1
2,623,526	-				-0.1
2,623,526	-				-2.6
2,623,526	-				-4.1
2,623,526	-				+1.9
2,623,526	-				-2.2
2,623,526	-				-0.2
2,623,526	-				-0.6
2,623,526	-				+0.1
2,623,538	+				-0.2
2,623,538	+				-3.4
2,623,538	+				-1.7
2,623,539	-				-0.6
2,623,539	-				-1.8
2,623,539	-				-0.0
2,623,539	-				+0.5
2,623,539	-				-0.5
2,623,630	+				-1.4
2,623,630	+				-0.9
2,623,631	-				-0.2
2,623,631	-				+0.1
2,623,631	-				+2.1
2,623,631	-				-0.1
2,623,632	+				-0.2
2,623,632	+				+0.5
2,623,632	+				-2.3
2,623,633	-				-0.7
2,623,633	-				+0.3
2,623,633	-				-0.6
2,623,633	-				-1.0
2,623,633	-				-2.6
2,623,644	+				-0.6
2,623,644	+				-0.9
2,623,645	-				-0.4
2,623,645	-				-1.0
2,623,645	-				-1.5
2,623,657	+				+1.9
2,623,658	-				-0.9