Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS08995

Experiment: biofilm; Day2; NLDM; Manganese (II) chloride tetrahydrate 10mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntLRK53_RS08990 and LRK53_RS08995 are separated by 14 nucleotidesLRK53_RS08995 and LRK53_RS09000 are separated by 12 nucleotides LRK53_RS08990: LRK53_RS08990 - NADH-quinone oxidoreductase subunit L, at 2,010,192 to 2,012,279 _RS08990 LRK53_RS08995: LRK53_RS08995 - NADH-quinone oxidoreductase subunit M, at 2,012,294 to 2,013,799 _RS08995 LRK53_RS09000: LRK53_RS09000 - NADH-quinone oxidoreductase subunit NuoN, at 2,013,812 to 2,015,266 _RS09000 Position (kb) 2012 2013 2014Strain fitness (log2 ratio) -1 0 1at 2012.277 kb on + strandat 2012.277 kb on + strandat 2012.277 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction biofilm; Day2; NLDM; Manganese (II) chloride tetrahydrate 10mM
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2,012,277 + +0.8
2,012,277 + +1.4
2,012,277 + -1.4

Or see this region's nucleotide sequence